Lethenteron reissneri (Far Eastern brook lamprey): 133349919
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Entry
133349919 CDS
T09663
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133349919 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133349919 (NUP54)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133349919 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
133349919
NCBI-ProteinID:
XP_061419770
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Position
32:complement(5281446..5297951)
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AA seq
604 aa
AA seq
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MTRGYVTAARCAPRRRDSTMAAASFSFGSAALGNAGGFGFGQNPATTTAAHTAGFGGFGN
TAAPMFGGFGIPTSCAVAPASVNQGFGGFGTLTMAQSGANTAVSTVGVNPGAAGVCGQQP
GAGFNFGGFATNFPPPTSTAASQPGTGFCFGGPRPTGMFGGFGGFGNLGAGTGGLAAGTG
ALGGGSVGPFGGFSAMGAQQSQQVAGAPVYNLATALSAPCVFSDERDAIIARWNQLQAFW
GTGRGYFLQNAPCLEFTLQNPFCHFKAVGYSLGTLHADEEGLVTMVLARPVHEVQEKQAL
VLEVLLRAVGGGGSAGNLQPGLESIKAVHQGQTEVVVYVTERVPGGGARRVHASTLCTAL
EQLSVRPMLDQQLSVTLLAPRVALSQAQMQQHLRTPPAGIDPIIWEQAKIDNPDREKLIP
VPMVGFKELHQRLKSQEEMTKLHQSRLEIIGEDILELKKLQTSTLAKSQQYKRKQLELSH
RLLQVVTKQEVMRKSGCAIQSDEEQLRVTLESLQGDLNAPTQYKGRLNELMSQVRMQSHC
GVARSDDKYSVEPGLLMEIKQHLRQQQEGLSHLISIIRDDMDDLKTIERGLSDASHTLSH
TRKH
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcggctacgtcactgccgcccgctgcgctccgcggcgccgcgactccacgatg
gcggcggcgtcgttctccttcggctccgcggcgctcgggaacgcgggagggtttggattt
ggtcagaacccagccaccacaacggcagcacacacagctggatttggtggctttggtaac
acagcggccccaatgtttggtggatttggcatccccaccagctgtgctgttgccccggct
tcagtgaaccaagggtttggggggtttgggacactcaccatggcccagagtggtgctaat
acggccgtgtcaactgtgggggtaaatcctggggctgctggagtctgtgggcagcaacct
ggagctggattcaactttggtggatttgcaacaaattttcctcccccgacaagcacggcc
gcgtcacagcccggcacggggttctgcttcggaggtccaagaccgacggggatgtttggt
gggtttggtggattcgggaatttgggcgcggggaccggagggcttgctgcaggcacgggg
gcacttggtggtggctccgttggaccgttcgggggattctcagccatgggagctcaacag
tctcaacaagtcgctggagctcctgtttataacttggccactgcgctgtccgctccatgc
gtattttctgacgagcgcgacgccatcattgcccgctggaatcaactgcaggcattctgg
ggcacaggtcgggggtacttccttcagaatgcaccctgcttggaattcacccttcaaaac
cctttctgccatttcaaggctgtggggtacagcctgggcacactgcacgcagatgaagaa
ggcctggtgaccatggtgctggcgcggccggtgcacgaggtgcaggagaagcaggcgctc
gtgctggaagtgctgctgcgcgccgtggggggtggtggcagcgctgggaacctgcagcct
ggcctggagagcattaaggctgtgcatcaaggacagacggaggtggtggtgtacgtgacg
gagcgggtccccggcggcggcgcccgcagggtccatgcctccacgctgtgtacggcgctg
gagcagctgtcggtgcgtccgatgctcgaccagcagctctccgtgacgctgctggcacca
cgagtcgcgctgtctcaggcgcagatgcagcagcatctgcgcactccgccagccggaatt
gacccaattatttgggaacaagcaaagattgacaaccctgatcgagaaaaactcatccct
gtgcccatggtggggttcaaagagttgcaccaacgactgaagagccaggaagagatgacc
aagctgcaccagagccgcttggaaatcatcggagaggacatactggagctgaagaagctg
cagacaagcacgcttgccaagtcacagcagtacaaacgcaagcaactggagttgtctcat
cggctcctacaggtggtgaccaagcaggaggtgatgcgcaagagtggctgtgcgatacag
tcggatgaggagcagctgcgcgtgacactcgagtccctgcagggcgaccttaacgcaccc
actcagtacaagggccgactcaatgagctcatgtcccaggttcgcatgcagagccactgt
ggagttgcacgctcggatgacaagtacagcgtggagcctggcctgctcatggaaatcaaa
caacacttgagacaacagcaggaaggactgagccatctgatttccatcattcgggacgac
atggacgacctgaaaacgatcgagcgtgggctgagcgatgcatcgcacacgctttcgcac
acgcgcaagcactga
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