Lethenteron reissneri (Far Eastern brook lamprey): 133349948
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Entry
133349948 CDS
T09663
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133349948
Cell adhesion molecules [BR:
lrj04515
]
Cadherins
Protocadherins
133349948
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
133349948
NCBI-ProteinID:
XP_061419834
LinkDB
All DBs
Position
32:6295769..6311332
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AA seq
1152 aa
AA seq
DB search
MPSPRATRLPIPLLLLAVAALGASDAAVPPPPLRFSVDEESPPGTALGNLAQALGLSAAE
LRARRPDVISASFRVAPESGDLTTASRFDRESLCPGPSGADDLPPCTLDVPVVLEGPSEV
RHVRVEVLDVNDHAPEFASHSTVLNVSEATPPGTAFPLEAARDLDAGANSVRGYELSGTD
AFGLDESAAWGPADGPAFPSLRLLRPLDREERAVHAFTLTARDGAAQPRVATQRVVVRVL
DANDNAPVFSQVVYHARLREGAPRGLLVARLNATDADEGDNGRVEYSARGRSDPRARDLF
SVDRTTGEVRLRGALDREQAATLELRVQARDLGPDPMTGYAKVLVTVLDENDNAPRIALG
VDAEGTARVPEGEAPGSLVASLLVSDPDDGDNGRYRCWLEGGGPFELLRGDAGYSVVTSA
TLDRETTDSYELLVRAEDRGSPPLDASAPLRVVVTDRNDNAPGFTRGAYEFSLLENNVPG
AFVATVEATDPDLGDNGRVVYSIAPGGSPPALSYVSVDGVSGKIYALRSLDRESLPRLSF
AVEARDLGEPQLNSTARVTIAVRDANDNAPAVSMPRLRNGNATRRVLRQSARGSVVLRVQ
ATDADEGDNGRVSYSVVHTEEEEGGEALGWFAVDARSGELTNARSFAPGDPGRFEVTVEA
RDHGSPALTARATITVILVDTVDELNPGDDDLDGADDGSSSSSGGSSSGGEGESGSSTTG
GEAGRMPLSLILIIALGGVCSLLFVAMVVIAVVCKRENKEIRTYNCRTAEAYLYRKPHKA
ISKRDIVVVPPSEAAARRGPRPAALGECSAEGEREPGQGAPHVPESPEQRAQVTRKSRTD
LPCSGGGSNGSRESGGLGVGPRRGGGVGGGGDGGGGGGDDGRPRADHRVRFAFRIRLSAR
SFLMCNRAGGHGARCSSSSGGSSSSSRGRASPCNISSGGGSHVDYRCNVHAQPGPQARPC
SFLTFGKDERQLAEQQQQQQLTTKKEDVGAVAGAGACNGASSSRSSCSSSSCSDAAELSA
FLGECVARYCSHESQPEARCSKSHRLLLSSSSSSSSSSSAAADLECGLDSLCSRDEDARG
EEDEDDERSVGFLRVLSVDSDGGDGSDGGSGDEDDGGGGGYDDATCSHHHVRRDDARLVL
DLTLEQVDGVTV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccccgcgggcaacccggcttcccattcccctcctcctcctggcggtggccgcg
ctgggcgcgtcggacgcggccgttccgccgccgccgctgcgcttctccgtggacgaggag
agccctcccgggacggcgctgggcaacctggcccaggcattggggctgagcgccgcggag
ctgcgggcgaggaggcccgacgtcatctcggcgtccttccgcgtggcccccgagagcggc
gatctgacgacggcgtcgcgcttcgaccgcgagtcgctgtgcccgggcccctccggcgcc
gacgacctcccgccgtgcacgctagacgtgcccgtggtgctggaggggccctccgaggtg
cgccacgtgcgcgtggaggtgctcgacgtcaacgaccacgcgcccgagttcgcgtcccac
tcgacggtgcttaacgtgtccgaggcgacgccgccggggaccgcgttccccctcgaggcg
gcgcgggacctcgacgcgggcgccaactcggtgcgcggctacgagctcagcggcacggac
gcgttcggcctcgacgagtcggcggcgtgggggccggccgacgggccggccttcccctcg
ctgcgcctgctgaggcctctggaccgcgaggagcgcgcggtgcacgcgttcacgctcacg
gcgcgtgacggggccgcgcagccgcgggtcgccacgcagcgcgtcgtcgtgcgcgtcctc
gacgcgaacgacaacgcgcccgtcttctcgcaggtcgtctaccacgcgcgcctccgcgag
ggcgcaccccggggcctcctggtggcgcgcctcaacgccacggacgccgacgagggcgac
aacggccgcgtcgagtactcggcgcgcggccgctcggacccgcgcgcccgcgacctcttc
tcggtggatcgcaccacgggcgaggtgaggctgcgcggcgcgctggaccgcgagcaggcg
gccacgctggagctgcgcgtccaggccagggacctggggcccgaccccatgacgggctac
gccaaggtgctcgtcacggtgctcgacgagaacgacaacgcgccgcgcatcgccctcggc
gtggacgcagagggcacggcgcgcgtccccgaaggcgaggcccccggctccctcgtggcc
tcgctgctcgtcagcgaccccgacgacggagacaacggtcgctaccgctgctggctggaa
ggaggaggccccttcgagctgctgcgcggcgacgcgggctactccgtcgtcacgtccgcg
acgctcgaccgcgagacgaccgactcctacgagctgctcgtgcgcgccgaggatcggggc
tcgccgccgctcgacgcctcggcgccgctgcgcgtcgtggtgacggaccggaacgacaac
gcgcccggattcacgcgcggcgcctacgagttctccctgctcgagaacaacgtcccgggc
gccttcgtggcgacggtggaggccacggacccggacctgggcgacaacggccgcgtggtg
tactcgatcgcgccaggcggctccccgcccgcgctctcctacgtctccgtcgacggcgtg
agcggcaagatctacgcgctgcgctcgctcgacagggagtccctgccgcgcctgagcttc
gcggtggaggcgcgggacctgggcgagccgcagctcaacagcaccgcgcgggtcaccatc
gcggtgcgcgacgccaacgacaacgcgcccgcggtgtcgatgccgcggctgcgtaacggg
aacgcgacgcgccgcgtgctgcggcaatcggcgcgcggctccgtcgtgctgcgcgtgcag
gccacggacgcggacgagggcgacaacggcagggtgagctactccgtcgtccacacggag
gaggaggaggggggcgaggcgctcggatggttcgcggtggacgcgcggagcggggagctc
acgaacgcgcggagcttcgcgccgggcgatccggggaggttcgaggtgacggtggaggcg
cgcgaccacggcagccctgcgctgacggcgcgcgcgaccatcaccgtcatcctggtggac
accgtggacgagctcaatcccggcgacgacgacttggacggcgctgacgatggcagcagc
agcagcagcggcggcagcagcagcggcggcgagggcgagagcgggagcagcaccacgggc
ggcgaagcgggccgcatgccgctctcgctgatcctcatcatcgcgcttgggggagtttgc
tcgctgctcttcgtcgccatggtggtgatcgctgtggtgtgcaagcgcgagaacaaggag
atccgcacctacaactgccgcacggccgaggcctacctctaccgcaagccgcacaaggcc
atcagcaagcgcgacatcgtcgtggtgccgccgagcgaggcggccgcgcgccgtggcccg
cggccggccgcgctcggggagtgcagcgcggagggggagcgggagccgggccagggggcg
ccccacgtgccagagtcccccgaacagcgcgcacaggtcacccgaaagagccggacggat
ctgccttgcagcggcggcggcagcaacggcagcagggagtcgggcgggctaggagttggg
ccgaggcgaggcggcggcgttggtggcggtggtgatggcggtggtggtggtggtgatgat
gggagaccacgcgctgaccacagggtcagattcgcgttcaggattagacttagtgcgagg
agctttctcatgtgcaacagagcagggggtcacggtgcccggtgtagcagcagcagcggc
ggcagcagcagtagcagcaggggtcgcgcatccccatgcaacatcagcagtggtggcggc
agccacgtggattacagatgcaacgtgcacgcgcagccgggaccccaggcgcgtccttgt
tcattcctcaccttcgggaaagatgaacgccagctcgcagagcagcagcaacagcagcag
ctgacgactaagaaggaagacgtcggtgcagttgctggcgctggagcctgtaacggtgcc
agcagcagcaggagcagctgcagcagcagcagctgtagtgacgctgccgaactgagcgcc
tttctcggggagtgcgtggcgcggtactgcagtcacgagtctcaaccagaggcgcgctgc
agcaagagccaccggctgctgctgtcttcgtcgtcatcttcatcatcatcctcatcagca
gcagcagatttggagtgcggactcgactcgctgtgcagtcgagatgaggacgcgagggga
gaggaggatgaggacgatgagaggagcgtggggttcctcagagtgctgagcgttgatagt
gacggtggtgacggtagtgatggcggtagcggtgatgaggacgatggtggtggtggtggt
tatgatgacgccacgtgctcgcaccaccacgtgcggcgcgacgatgccagactcgtgttg
gacctcacgctggagcaggtcgacggagtcaccgtgtga
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