Lethenteron reissneri (Far Eastern brook lamprey): 133349985
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Entry
133349985 CDS
T09663
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133349985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133349985
03036 Chromosome and associated proteins [BR:
lrj03036
]
133349985
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
133349985
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
133349985
RSF complex
133349985
WICH complex
133349985
B-WICH complex
133349985
NORC complex
133349985
BRF complex
133349985
NuRF complex (fruit fly)
133349985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
133349985
NCBI-ProteinID:
XP_061419890
LinkDB
All DBs
Position
32:complement(9265808..9290708)
Genome browser
AA seq
1018 aa
AA seq
DB search
MSEDEKSATEAERRQSEVNDPSFSPNSPSRNAVPKPETKAPDPEYENKMKTDRSNRFEYL
LQQTELFAHFIQPAAQKTPTSPLKLKPGRPRVKSDEKQSLLSVGDARHRRTEQEEDEELL
SESRKSANALLRFEESPSYVKCGTMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQT
ISLLGYMKHYRNIPGPHMVLVPKSTLHNWMAEFERWVPSLRAVCLIGDKDHRAAFIRDVL
MPGEWDVCVTSYEMIIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLL
TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQQLVERLHMVLRPFLLRR
IKADVEKSLSPKKECKIYIGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRK
CCNHPYLFDGAEPGPPYTTDTHIVINSGKMVVLDKLLPKLHEQGSRVLIFSQMTRMMDIL
EDYCMWKGYEYCRLDGQTPHEDRQVSIAGFNAPDSSKFVFMLSTRAGGLGINLATADVVI
LYDSDWNPQVDLQAMDRAHRIGQKKVVRVFRFITESTVEDRIVERAEMKLRLDSIVIQQG
RLVDQVANKLGKDEMLQMIRYGATQVFSSKESQITDEDIDVILERGAKKTAEMNEKMSQL
GENTLRTFTMDTESSVYNFEGEDYKAKQKLNMTEWIEPPKRERKANYAVDAYFREALRVT
EPKAPKAPRPPKQPSIQDFQFFPPRLFELLEKEILHYRKTIGYKVPRNPDVPNPAVTQKE
EQGKIDTAESLNEEELEEKEKLLTQGFTDWSKRDFNQFIKANEKWGRDDIDNIAQEVEGK
TPEDVIEYSALFWDRCNELQDIERIMAQIERGEARIQRRIGIKKALDAKIARYKAPFHQL
RISYGTNKGKNYTEEEDRFLICMLHKMGFDRESVYDELRQCIRNAPQFKFDWFLKSRTAM
ELQRRCNTLISLIEKENSELEEKEKAERKRRGPKSSSAQKRKAENTPDSRGRKKKMKL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggacgagaagagcgcgacggaggccgagcgccgtcaaagcgaggtgaatgat
ccatcgttctcgccaaattcgccgtcaagaaacgccgtccccaagcccgagaccaaagca
ccagacccagagtatgagaacaagatgaaaacggatcgctcgaaccgcttcgagtacctc
cttcagcagacggagctcttcgcccacttcatccagccagcggcgcagaagactcccacg
tcgccgctcaagctcaagcctgggcggccgcgcgtaaagagtgatgagaagcagagcctg
ctgtcggtcggcgacgcccgccaccgacgcacggagcaggaggaggatgaggagctgctc
tctgagagtcggaagagcgccaacgctctcctccgcttcgaagagtccccttcctatgtg
aagtgcggcacgatgagggattaccaggtcaggggtctcaactggctcatctccctgtat
gagaacggcatcaatggcatcctcgccgacgagatgggtctgggaaagacactgcagacg
atctccctgctgggctacatgaagcactaccgcaacatcccaggcccccacatggtgctg
gtgcctaagtccacgctgcacaactggatggccgagttcgagcgatgggtgccctcgctg
cgggctgtctgcctcattggagacaaagaccatagggcggcgttcatccgcgacgtgctg
atgccgggcgagtgggacgtgtgcgtcacctcgtatgagatgatcatccgcgagaagtcc
gtcttcaagaagttcaactggcgctacttggtcatcgacgaggctcaccgcatcaagaac
gagaagtccaagctgtctgagatcgttcgagagttcaagacgacaaatcgtctgctgttg
acagggacgccattgcagaacaacctgcatgagctgtggtccttgctcaacttcctgctg
cccgatgtgttcaactctgcagatgatttcgattcgtggttcgacaccaacaactgcctt
ggcgaccagcagctggttgaacgtctgcacatggtgttgcgaccattcttgctgcgtcgc
atcaaggcggacgtggagaagagcctgtcccccaagaaagagtgcaagatctacatcggg
ctcagcaagatgcagagagagtggtacacaaagatcctgatgaaggacattgacatcctg
aactcagccggcaagatggacaagatgcgcttgctcaacatcctcatgcaactgcgcaag
tgctgcaaccacccgtacctgtttgacggcgcggagcctgggccgccctacaccacggac
acccacatcgtcatcaacagcggcaagatggtggtgctcgacaagctgctgcccaagctg
cacgagcaggggtcccgcgtgttgatcttcagccagatgacgcgcatgatggacattttg
gaggactactgcatgtggaaagggtacgagtactgccgtctcgatggccagacgccgcac
gaggatagacaggtatcgattgccggcttcaacgctccggacagcagcaagttcgtgttc
atgctgtcgacgcgagctgggggcctgggcatcaatctggccacagccgacgtggtcatc
ctctacgactctgactggaacccccaggtcgacctgcaggccatggaccgagctcaccgc
atcgggcagaagaaggtggtgcgcgtcttccgcttcataacagagagcacggtggaggac
cgtatcgtggaacgtgccgagatgaagctccgcctcgactcaatcgtcatccagcagggc
cgcctggtggatcaggtggccaacaagctgggcaaggatgagatgctgcagatgattcgc
tacggagctacgcaggtgttctcttcaaaggagagccagatcaccgacgaggacatcgac
gtcatcctcgagcgcggggccaagaagacggccgagatgaacgagaagatgtcccagctg
ggcgagaacaccctgcgcacgttcaccatggacacggagtcgagtgtctacaacttcgag
ggggaggactacaaggccaagcagaagctgaacatgactgagtggattgagccacccaaa
agagagcggaaggccaactacgcggtggatgcctacttccgtgaggccctccgtgtgacg
gagccaaaggcccccaaggcaccgcgcccgcccaagcagcccagcatccaggacttccag
ttcttccccccgcgcctctttgagctcttggagaaggagatcctgcactaccggaagacc
attggctataaggttccccggaacccggacgtgcccaaccccgcggtgacgcagaaggag
gagcagggaaagatcgacacggctgagtcgctcaatgaggaggagctcgaagagaaggag
aaactactcacacagggcttcacggactggagcaaacgagattttaaccagttcatcaag
gccaacgagaagtggggtcgcgatgacatcgacaacattgcccaggaggtggagggcaag
actcccgaggacgtcatcgagtactcggcgttgttctgggatcgctgcaacgagctgcag
gacatcgagaggatcatggcgcagatagagcgcggggaagcgcgcattcagcgccggatc
ggcatcaagaaagcgctggacgccaagattgcacgctacaaggcgcccttccaccagcta
cgcatctcgtatggcaccaacaagggcaagaactacacagaggaggaggaccgcttcctc
atctgcatgctgcacaagatgggcttcgaccgtgagagcgtctacgacgagctgcgccag
tgcatccgcaacgccccgcagttcaagttcgactggttcctcaagtcgcgcacggccatg
gagctgcagcggcgctgcaacacgctgatctcgctcatcgagaaggagaactctgagctg
gaggagaaggagaaggcggagaggaaacgacgcggacccaagtcctcctcggcgcagaag
agaaaggcggaaaacacccctgattcccgtggccgcaaaaagaaaatgaagctgtga
DBGET
integrated database retrieval system
