Lethenteron reissneri (Far Eastern brook lamprey): 133350003
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Entry
133350003 CDS
T09663
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03410
Base excision repair
lrj04140
Autophagy - animal
lrj04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133350003
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133350003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133350003
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133350003
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133350003
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
133350003
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
133350003
MMR (mismatch excision repair)
Other MMR factors
133350003
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133350003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NOA36
Nop14
Motif
Other DBs
NCBI-GeneID:
133350003
NCBI-ProteinID:
XP_061419924
LinkDB
All DBs
Position
32:9558854..9564308
Genome browser
AA seq
208 aa
AA seq
DB search
MGKGDPKKPKGKMSSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRF
EDMAKVDKVRYDREMKTYVPPKGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPG
LTIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDMASYRSKGKVETSKVASKPAS
KQRDDDDDEDDDEDEDEDEDEDDDDDDE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagggagatccgaagaagcccaagggcaagatgtcgtcatacgcctacttcgtg
cagacgtgccgcgaggagcacaagaagaagaacccagaggcgtcggtcaacttcgccgag
ttctccaagaagtgctccgaacggtggaagacgatgtctgagaaggagaagactcgcttt
gaggacatggcaaaggtggacaaggtgcggtatgaccgagagatgaagacgtacgtgcct
cccaagggcgagaggggcagcaggaaaaagaaggaccccaatgcccccaagagacccccg
tcggctttcttcatctactgcgctgagtaccgctccaaggtgcgcgccgaaaatcccggt
ctcaccattggctccattgccaagaaactgggtgagatgtggaacaacgctcctgctgac
gaaaagtcgatctacgagcgcaagacagccaagctgaaggagaagtacgacaaggacatg
gcttcgtacaggtcaaagggcaaggtcgagaccagcaaggttgcctcgaaaccggccagc
aagcagagggatgatgacgacgatgaagatgatgatgaggacgaagacgaggatgaggac
gaagacgatgatgatgatgacgaatag
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