Lethenteron reissneri (Far Eastern brook lamprey): 133350011
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Entry
133350011 CDS
T09663
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133350011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133350011
03036 Chromosome and associated proteins [BR:
lrj03036
]
133350011
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133350011
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133350011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Death
Motif
Other DBs
NCBI-GeneID:
133350011
NCBI-ProteinID:
XP_061419944
LinkDB
All DBs
Position
32:10349222..10377224
Genome browser
AA seq
1982 aa
AA seq
DB search
MFGQNKPFGSTFGSTFGGNASTFGQTSNAGGFGSFGAAGFGAAPAGGGMFGGTSQTKPAG
LFGAGAFGQAPANATSTSGFGAATSAAGNPFSSSLFSTPQTNNAANTGGFVQNKPAGFGG
FGANPGTGGLFGTTTATVTQFGASTATGGAFGGFSAQATKGTTIKFIPVEGTDTMMKNGA
STTIRTKHQCITAMKEYETKSLEELRLEDYTDNRKGLQAGALGAAATGSLFGAAATPVNQ
TGGLFGTAATAPAAATGFAFGQPKPNAFGTGAAFSASASTGGGLFGNTQAQPGAAAAGAG
GAAAGVGTGVFSKPFGVATATTQASGFSFSGAATATPFGQANPTTGGLFGAVGASRPGGL
FGTGTATTATAGAGFGTGGAFGVAAPASTGLFGATQQSSGFGATGATLFGNKPAGFAAPA
TSTASGFGTGVGGGLFGAKPGGLSLGATNNATGFGFGSANTGGLFGNKMTTGGLGAGLGS
TFGSGLGTGQPSLFGNSQPAMGTGLGVSSLSTAPFGGVGSSSGFGTTQGALGAAQAGTAQ
AVIHQNQITALAYNPFGDSPLFRNIVTDPQKKEERLKPTNPEAQKAFSTPTHYRLTPRPA
ARLRPKALGSSGSAKAQLFDGLDDEDAALCNATFMPRKSVKKLAIKSTQSPVFSPLSHSK
DHDDLAPPSDYPVNGLSNGTSMALHANADDTDVSRELPSDMSLGTPGGVEVGTSTRGPPP
KMHKSLLNGSLDGSLLALNVRQRGRSASGGSRGAEGGAMGGGGMDRERGSEESSSSVVEN
STHDDEDYEPDEEQQRMVQPHPAGIVLTRFGYYTIPPMDELARLTDENRDCIVNNFTIGR
QGYGSICFSGEINLKLLNLDAIVHIRRKEVIVYPDDNDKPPCDEGLNRRAEVTLDGVWPL
DKTTGRHITSPERLMRMAYEERLERASTRQGALFREYRPETGSWVFDVKHFSKYGIQDDE
EDEDEVVDPLTGKVLPALPPGHVVEGKKLKTGLAPPAMQQSQKLVSQGKLGPTELGGKEL
GGLGGEQDSEMADISLEPVPRGFYVEDDDTCELQGHMGGYVKDLEDGAEPVAASHHLASY
LGMSTHRLQVMKASFLAEEEEGEVEVSPQRFGAVSHLPSFSVMQNASCAAKLADMRTLRS
RLSGALLQSKFGLGSTIGMDATVVSPHKDLGQEHLATKPRIFTRIREPSHHVTLSRPYSL
LSPPVGLPVDGKAGGPGRAAAAPQRACGLIPAHNSVAHGRHCLADAALYAGRSFRVGWGP
GGSLCHVGDLIGCTNSEEQSTDRHEEVGLNAFTPTLVKRIAPSPFKVHVECVSVCPWAGS
EGRYRIQEKLEIALEESERVNEHAQSDAMELGAAAGSDDRELCCPLFRPRPGVSSVHRYA
HWVEDVLAQEAAASTSETDTLKQWYLVWTLCEALWGHLHGRDRVGDDEDDVDVRDEEEAA
MEGVGEGGGRAYAQQAERREALSRWLERAALEKVEGEVALGGNGKLSTYAVFSCLSGRQI
ARACRLAQDAGDHRLALLISQAVGSKPTRQLLALNLSEWGKLQVDHYINSDRIAVYTLLA
GKPVWEMSAGEPVNVCESLDWKRSLAVHLWYMLSPMVSVADALKAYENAFEGSDECERYA
CRPLPPYMEDNKLCPVEEEEMDEEERKQRRPVRDACYHLLKLYSDKHYDLDQLCDASSVT
ADPLDYRLSWHLWLAVQALGYQHLPARSAGALNAAYAAQLESAGLWEWAVFVLMNIPDAS
SRTKAVREMLGRHCSEAEMTEEAFEFVTGRLGVPASWLHEAQAHRARQLGDHRDEAHHLL
HAGLYNACHRVVIRNLAADAIINENYGYLKTFLEEMAAPEISIHIPDWEVAGRVFLDYIR
VTETLLRLHNESETPGAELEALCTEVALLCPRIEDVPCFSARDRLSQAEMAKQTANILRA
VMSLQQGGGEEGRDDDMRPGGRLAGLPLHPYAQHIGQLPLPGDYALQELRTLVSAYRLAL
TT
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaaaacaagccctttggaagcaccttcggttccacttttggtggaaacgcc
tccacgtttggacagacttctaatgcagggggctttggaagttttggagcagcggggttt
ggcgcagcccctgccggaggagggatgtttgggggcaccagtcaaacaaagccagccggg
ctgttcggtgcgggtgctttcggacaggcacctgcaaatgccaccagcacatcagggttt
ggcgctgctacctccgctgctggaaatccgttcagctccagcctcttctcaacaccacag
accaacaatgcagcaaacaccggaggatttgttcagaacaaaccagctggctttggaggg
tttggagccaacccaggaaccggtgggctttttggcactaccacggccacagtaacccaa
tttggagccagcacagccactggaggagcttttggagggttcagcgcccaagccacgaaa
ggaacaacaataaagttcattccggtcgagggcactgacacgatgatgaagaatggagct
agcaccaccatccgtaccaagcaccagtgtatcactgctatgaaggaatacgagaccaag
tcgcttgaggagctgcgcctggaggactatacggataatcgcaagggattgcaggctggg
gctttgggggcagcagccacaggaagtttgtttggagcggctgccacccctgtcaatcag
acgggtggtctctttggaacggcagctactgcgccagcagcagccactggctttgcgttt
ggccagcccaaacctaacgcgtttggcacaggggcagcgttcagcgcatcagcgtcaaca
ggaggtggcctgtttggcaatactcaggcccagccgggggctgcggctgctggcgccgga
ggtgctgcggcaggggtcggcacgggcgtgttcagcaagccatttggagtggccaccgca
accacgcaggcctccggattttcttttagtggagctgccaccgccacacctttcggccag
gccaaccccacgacaggaggtttgtttggcgctgtgggagcgtcacgcccgggagggctc
tttgggaccggcacagcgaccacagccacggctggtgcaggatttggcacaggaggggct
tttggtgtggcggcccccgcctctactggactctttggtgccactcaacagagttctggt
tttggtgcgactggagcgacgttatttggcaacaagccagcaggatttgctgctccagct
accagcactgcctcaggattcggtaccggagttgggggaggactatttggagccaaaccg
ggtggcctctcccttggtgccaccaacaatgctacgggctttggttttggcagtgcaaac
actggcggtctgtttggaaacaaaatgactacagggggtctaggagctgggcttggctcc
acctttggttctgggcttggaacaggacagccgtctctcttcggaaacagccagcctgcg
atgggaacaggtctgggtgtcagctccttgtccaccgctccttttggtggcgttggttcc
tcctcgggtttcggaacaacgcagggtgccttgggggccgcacaggctgggacggcacag
gctgtcattcaccagaaccaaatcacagccctggcgtacaacccattcggggactctcca
ctctttcgcaatatcgtcacagacccacagaagaaagaagagcggctgaaaccgaccaat
ccggaggcccagaaggcattctccactcccacacattaccggttgacgcctcgaccggcg
gctcgtctgcgacccaaggcgctcggctcttcgggatcggcaaaagcacagctgttcgac
ggactggacgatgaggacgccgcgctgtgcaacgccacgttcatgccgcggaaaagtgtc
aagaagcttgctataaagagcacacagtctccagttttctctccgctatctcactcgaag
gatcatgatgacctggcacctccctccgattaccctgtcaacggcttgagcaacggcacc
tccatggcgctacatgcaaatgctgacgacacagatgtgagccgagagctgccgtcggac
atgtccttgggcacgccgggtggcgtggaggtgggcacgtccaccaggggcccgccgccc
aagatgcacaagagcctgctcaacggctccctcgatggatctctgctggcgctgaacgtc
cgacagcgcggtcggagcgccagtggcggtagcagaggcgccgaagggggggcgatggga
ggcggggggatggatcgggaacggggcagcgaagagtcgtcgtcttctgtggtagagaat
tcgacccacgacgacgaggattacgaaccggacgaggagcaacaaaggatggttcagccg
catcctgcaggcattgtgctcacacgctttgggtattataccattcctcccatggatgag
ctggcaaggcttacagacgagaacagagactgcattgtaaataatttcaccattggccgg
caaggttacggttccatctgcttttcgggggaaataaacctgaagctgctgaaccttgac
gcgatcgtgcacatccgccggaaggaggtgatcgtgtaccccgatgacaacgacaagcct
ccctgtgatgaaggcctcaacaggagagcggaagtgaccctggatggtgtgtggccattg
gacaagaccacgggccggcatatcacgagccctgagcgactgatgcgcatggcctatgag
gagcgcctcgagagggcctccacgcggcagggagcgctgttccgcgagtatcggcccgag
accggttcttgggtctttgatgtaaagcatttctccaagtatggcatccaagatgatgaa
gaagacgaggacgaagtggtggaccctttaacgggcaaagtcctgccggctctgccgcct
ggccatgtggtggaggggaagaagttgaagactgggctcgctcctccggcaatgcagcag
tctcagaagctcgtctcgcaaggaaagcttggccccacagagctgggaggcaaggaactt
ggcgggctcggtggggagcaggacagcgagatggccgacatctccctggagccggtgcca
cgtggcttctacgtggaagacgacgacacgtgcgagctgcagggacacatgggtggctac
gtcaaggatctggaggacggagcggagcccgtagctgcctcccaccacctcgcctcttac
ctggggatgagcacacaccgcctgcaggtgatgaaggcatcgtttctggcggaggaggag
gagggagaggtggaggtatcgccgcagcggtttggtgccgtctctcatttgccatccttc
tcagtgatgcaaaatgcttcctgcgctgccaagcttgctgacatgaggacactccgcagc
cggctctcgggagcactgctgcaaagtaagttcggacttggctccactattgggatggat
gccactgtagtttcaccgcataaggatcttggacaagaacacctcgccaccaaacctcgg
attttcaccagaattcgtgaaccgtctcaccacgtgaccttatccaggccctactctcta
ctctcccctcctgtgggtctacccgttgacggcaaggcaggcgggcctggacgagcagcg
gccgcccctcagcgggcctgtggcctcataccggcccataactcggtggcccatggtcgc
cactgcctcgccgatgcggccctttatgcaggccgctcgtttcgtgttggctggggcccc
ggcggaagtctttgccacgttggcgaccttatcggatgcacaaatagtgaggagcaatcg
accgatagacacgaggaggtggggctgaatgccttcacaccaacactggtcaagcgaatt
gcgccatcgccgttcaaggtgcacgtggagtgcgtgagcgtctgcccatgggccggctcc
gagggccgctaccgcatccaggagaagctggagattgccctggaggagagcgagcgtgtg
aacgagcacgcgcaatccgacgcgatggaactcggggcggccgctggctcagacgacagg
gagctctgctgccccctgttccgcccacggccaggcgtgtcctcggtgcaccgctacgct
cactgggttgaggatgtgctcgctcaggaggcggcagccagcacctccgaaactgacact
ttgaagcagtggtatctggtgtggacgctgtgcgaggcgctgtggggccacctgcatggc
cgtgacagagtgggagacgacgaggatgacgtagacgtcagggatgaggaggaggctgcc
atggagggtgtcggggaaggtggcggtagggcgtatgcccagcaggcagagcgacgggag
gccctgtcgcgctggctggagcgtgccgccctggagaaagtcgaaggcgaggtggcgctc
ggcggtaacggcaaattgtcaacctatgccgtattcagctgcctgagcggaaggcagatc
gcgcgtgcttgtcggctggcacaggatgcaggagaccatcgactcgcgctactcatcagc
caagccgttgggagcaaaccaacccgtcagctgctggccttgaacctctccgagtggggc
aagttgcaggtcgaccattacatcaacagcgatcgcatagcagtctacaccctactcgct
ggcaagccggtgtgggagatgtctgcgggggagccggtgaacgtgtgcgagtcacttgac
tggaagcgttcgctcgccgtccacctctggtacatgctgagccccatggtgtcggtggct
gatgccctgaaggcctacgaaaatgcattcgagggctcggacgagtgcgagcgatacgcc
tgccgaccgctccctccatacatggaggacaacaagttgtgccctgtggaagaggaggag
atggatgaggaagagaggaagcagaggcggccagtgagggatgcctgctaccacctgctc
aaactctacagtgacaaacactacgatttggaccaactgtgtgatgccagctccgtcacc
gccgatcccctggattaccggctgtcctggcacctgtggcttgccgttcaagcgctcggc
taccaacatctgcccgctcgtagcgctggagcactgaacgccgcttacgctgcccagctt
gagtcagctggcctctgggagtgggcggtctttgtgctcatgaacatccccgacgcaagc
tcccgaacgaaggcggtgcgggagatgctgggcaggcattgcagtgaggcggagatgacc
gaggaggcatttgagtttgtgacggggcgcctgggtgtgccggcttcctggctccatgag
gcgcaggcccaccgagcccggcaacttggagaccaccgtgacgaggctcaccacctgttg
catgctggcctctacaacgcttgccacagggtcgtaatccgcaaccttgccgccgatgct
atcatcaatgaaaactatgggtacctcaagactttcttggaggagatggcagcaccagag
atcagcattcacatccccgactgggaggtcgcagggcgggtcttccttgactacatccgg
gtcacggagactctgctcaggctgcacaacgagtcggaaacgccgggtgccgagctggag
gccctttgtacagaagtggctttgctgtgtccacgcatcgaagatgtcccttgtttttct
gcacgagaccgtctcagccaagcagagatggcaaagcaaacggcaaacattctgcgggcg
gtgatgagtttgcagcagggcgggggggaggagggcagggatgatgacatgcgtcctgga
ggacgcctggccggacttccactgcacccctacgcacagcacatcgggcaacttccgcta
cccggcgactatgcgctgcaggagctgaggacacttgtgtctgcgtaccgcctggccctc
accacatga
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