KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133350039
Entry
133350039         CDS       T09663                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1-like isoform X1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lrj01009]
    133350039
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrj04121]
    133350039
Enzymes [BR:lrj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133350039
Protein phosphatases and associated proteins [BR:lrj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133350039
Ubiquitin system [BR:lrj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133350039
Motif
Pfam: SH3_1 SH3_9 SH3_2 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-RING_11 Prok-RING_4 zf-ANAPC11 ZNF512_C2H2 zf-rbx1 Trm112p zf-MIZ CLN5
Other DBs
NCBI-GeneID: 133350039
NCBI-ProteinID: XP_061419986
LinkDB
Position
32:complement(11851784..11954299)
AA seq 917 aa
MDESSLLDLLECPVCLERLDSTAKVLPCQHTFCKRCLQSIVSSRQGELRCPECRTLVRSA
VDDLPSNILLLRLLDGITRGGHGPHISPGQPGVAAVVPARVNRAARLAAAAMVAGTPLSS
NGALPAQTLSRSAASAANKQSLPVVPCARALYTYEGKEPGDLPFSKGDLVFLRRRIDDSW
YHGETSAGAQGFFPASYVQVLRALPTPAVPLLLQPAATPAPPGTPTVGAAQPQARPAPPP
QCRALYDFAVSGGEQDKDCLTFSKDEVLTVIRRVDENWAEGMLGDKIGIFPISFVEFNTM
AKLLLGLESANIHTLGEALGQPQPSTSSASSASSSSSSSSSSVTSSAAAVASATAGDAGR
KNAKKRHSFTSLTMSNKASGAGAQAQAAHQHRHSCDISAPVLISSSNPAAAARIVAAATG
NGLSSSAPSQIYIGTTGLIVTTAPTSPVTTVAPVTFLTEGAPPSGPTEGQALPAVVSTPA
VVPGMPLPRPALPSAAGTTEPAVPVPRPPPQQYPLIQIFVALYPYKPQKADELELRKGEM
YRVLERCQDGWYKGSSLRTGTAGVFPGNYVAPVNRAPPVPQQKLPPPVGSANSSCSTSCT
SSRAVTVTVPIATVTTSQASNGGGLSACPLAAPPTSPRLGPATATRHVAQGPAQNGVRPA
PSSTDKPVAAVPPIQSQGGSPRLSAASARPQPAAPLPAPVTALPPAPPCPCPSLSSALAS
VASAITPPNVSAASLDEQAGLGGSGVSSAPVASAASGGATAGGKSEKGEKDKKERKSSFL
KILSSASAKRKSRSPPLSASPPPPQSTHDAQQPEAHAMGATAAAEVGGHGRSLTPPVAPP
PRQPCSAMAPVRPETKPLQRERYRVVVPYPPQSDVELELREGDVVFVHRKRDDGWYKGTL
QRNGKTGLFPGSFVESF
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggacgagtcatctctgctggaccttctggagtgcccagtgtgtctggagcgactcgac
tctacggccaaggtgctgccatgtcagcacaccttctgcaagcggtgcctgcagagcatc
gtctcgtcccggcagggtgagcttcggtgtccagagtgtcggaccctggtgcgctccgcc
gtcgacgatcttccctcaaacatcctcctgcttcgtctcctcgatgggatcacgcgtgga
ggtcacggccctcacatctcgccgggtcagcccggagttgctgccgtggtgccagccagg
gtgaacagggcagcccgtttggcagcagcagccatggtggcagggacaccgttgtccagc
aatggggctttgccggcccagaccctcagcagaagtgccgcctctgctgccaacaagcag
tccctgcccgtggtgccgtgcgcccgggcgctctacacctacgagggcaaggagccgggc
gacctgcccttcagcaagggggacctggtgttccttcggcggcgcatcgacgacagctgg
taccacggggagacgagcgccggcgctcagggtttcttccccgcaagctacgtgcaggtg
ttgagggcgctgccaacgccggccgtaccgctgctgctccagcccgcggcgacgccggca
ccaccggggacgcccacggtgggggccgctcagccccaggctcgtccggcccctccccca
cagtgccgggcgctgtacgacttcgcggtgtcgggcggggagcaggacaaggactgcctc
accttcagcaaggatgaggtgctcacggtcatccggcgcgtggatgagaactgggccgag
gggatgctcggagacaaaattggaatcttcccgatctcgtttgtggagtttaacaccatg
gccaagctactgctcggcctcgaatcggccaacatccacacgctgggcgaggcgctgggc
cagcctcagccgtcgacctcctccgcatcctccgcatcctcctcctcttcttcctcttcc
tcctccgtcacctcttcggccgccgcagtcgcgtcggccacggcgggcgacgccggacgc
aagaacgccaagaagcgccactcgttcacgtcgctcaccatgtcgaacaaggcgagcggg
gcgggcgcgcaggctcaggcggcgcaccagcaccggcactcgtgcgacatcagcgcgccc
gtgctcatctcgtccagcaacccggccgcggcggcgcgcatcgtggcggccgccacgggg
aacgggctgtcgtcaagcgccccctcccagatttacattgggacgacgggactgatcgtg
acaaccgcccccactagcccagttaccacggtagcgcccgtcaccttcctcacagagggg
gctcctccgtctggccccacggagggacaggcgctacccgccgtggtgtccaccccggcc
gtggtccccgggatgccgctgccgcgtcccgcgctgccgtcggccgccgggacgacggag
cccgcggtgcctgtgccaaggccgcctccgcagcagtacccgctcatccagatcttcgtg
gcgctgtacccgtacaagccgcagaaggccgacgagctggagctgcgcaagggcgagatg
taccgtgtcctcgagcgctgccaggacgggtggtacaagggatcgtcgctccgcaccggc
acagccggcgtcttcccggggaactacgtcgcgcccgtcaaccgggcgccgccggttccc
cagcagaagctgccgcccccggtcggctccgccaactcgagctgcagcaccagctgcacc
agcagcagggctgtcacggtgaccgtccccatcgccacggtgacgacctctcaggcgagc
aacggaggcggcctctcggcgtgtcccctggccgctccgccgacgagcccgcggctgggc
cccgcgaccgccacgaggcacgtggcccaaggaccagcgcagaacggcgtgcggccagct
ccatcgtcgacggacaagcccgtggcggctgtgccccccatccagtcccagggcggctcc
ccgcgcctctcggcggcctcggcacggccccagccggccgcgccgctcccggcgccggtc
accgcgctgccgccggcgccgccgtgcccgtgcccctcgctctcctccgccctggcgagt
gtcgcgtccgccatcaccccgcccaacgtgagcgccgccagcctcgacgagcaggccgga
ctcgggggctcgggcgtttcgtctgcgcccgtcgcctccgccgcctcgggaggagcgacg
gccggcgggaagtccgagaagggcgagaaggacaagaaggagcgcaagagcagcttcctc
aagatcctgtccagcgcttcggccaagcgcaagtctcgctcgcctccgctctccgcctcg
ccgccccctccacagtcaacccacgatgcccagcagcccgaagcccatgcaatgggagct
actgcggcggcggaggtcggaggtcatggaaggtcgctgaccccgccggtcgcccctccc
ccacgccaaccgtgctcagcaatggcgcccgtgaggcccgaaacgaagccgctccagcgg
gaacggtaccgcgtggtcgtcccgtacccaccgcagagcgacgtggagctggagctgaga
gaaggggacgtggtcttcgtccatcgcaagcgggacgacgggtggtacaagggcacgctg
cagcgcaacggcaagaccggcctcttcccgggcagcttcgtcgaaagcttctga

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