Lethenteron reissneri (Far Eastern brook lamprey): 133350157
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Entry
133350157 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33-like isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrj01001
]
133350157
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133350157
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133350157
Protein kinases [BR:
lrj01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
133350157
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133350157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
133350157
NCBI-ProteinID:
XP_061420170
LinkDB
All DBs
Position
33:complement(830510..878618)
Genome browser
AA seq
1500 aa
AA seq
DB search
MDDVVLVSVTGANGEIAVPVLVGAEHIHDHHHHHSSSSNHLNQHPQLRLLLHSQHEQEAG
DGGGGGQGDAGPRGGGGGDDKGRASPPEQQAALSAGPALTPDPAGSHTKAASEAAGPAGP
EHDDAEKASDGDNIVNNNSSSKEEEDGRNSSSSNKEEAVPGEEVAPPPPPPPPPPLNLLE
SCAACGQALQRREPKLLPCLHSLCAVCVPPPQPHIPVPMAGPVMNGQPHQQPHHQQQQHP
QQHPQQHPQHHQQQQHHQQQQQQPPSPVGPMSVQAIVRCPICHQGCQPKDIVDNYFVTDG
SEGGVAGTENSSQPCTSCDDGADAEGFCVECLEWLCRTCIEAHQRVKFTKDHAIRRKDDA
QDDAAGMATLRPVYCPVHRREPLKLFCETCDRLTCRDCQLLGHKEHRYQFVEEASQQQVV
IIETLTAKLQEKKNYVHFAAMQVQNRLNEVVEAHKKVEHDIRVAVFTLVNEINKRGKSLL
QQLESVTRERQAKLGRQRDEIGELARHVEHVLSFARFAVASGNSTALLYSKRLVTYQLRA
ILRARCDPAPVASSGVKFHCDSSFWAKNVLNLGTLVVENPPPGAVHAFLPNIALAQAGRP
PPGTVPHMPASPSAPGPPLPASLAGPGVPMRQQASGGGPLQPPPLGPPGSGQINLAQLRL
QHLQQRAIKQHQQQQQHQQQQQQHQHQQQQQHQLQQQHQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQLRLVARPQPLQPHRRVSSSASVAAATALATGQPAFATLSPTNGGQPPRLISVQ
SFHRATQHLSATQARAVAQGAGSVRIGGQQQQQQPPGPQQQQPQQQQQQRAPQGPPQNPA
HSLRQHPGSSVPLGGPFPVVSLHPPPPPPAHPAHPKPAPLVAYDHIPSVTNPENLPSLPH
IPQIQFEDVSSVLKLAAVHANGALADGVPSPAPRLTSPTFSISPGSAMHSPVTVASQTPI
RPSSASSTGSHGSSASPKVPYVRLERIKHEPGTALAERGSACGGQQQQHHHHHHHHALAS
ATPATAAPPASANSVSVKQEAALGGGGAAGSACCVLSSPDSILTPPLSNPSCESLPIHAV
RVKEERLDGADYAASSTPHCGAGHGHSPRRHSQPDSTTGLPGHRGAEGTGRGASGADSSS
ALRRGDEGAGSDGAASGGGGGDDAAQEPAPEQMAEGAEGAEGAEGAEGNCAVCGADAPVL
ACAECGGRYHLTCHVPVLSEHPGGDWRCGLCRGPDCEEDAAETARDGVTAGERRRCEVLL
LSVLCRITSEPSAPRTGVSEAEKQMNGTEADSDGGGGGDGGDAPLPGWLDAVRLRLQPDS
AEPYGSPEEFVSALRSGLRSHRDHRALEAHVTDRLGELFPGPSETHGTCGADLAEDAGVD
AAAAEVADAAGVCPDGLATVDTAEACGDPSAGTSEDAGTSGTADACADVGAGSADVGGAL
DADAGAGADVVEDAEVEVETAEAAEDVSTSAGGDGGGDSDAECGEPKSKRARLDPAEPGP
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtggtgctggtcagcgtgaccggggcgaacggagaaatcgccgtgcccgtc
ctcgtcggcgccgagcacatccacgaccaccaccaccaccacagcagcagcagcaaccac
ctcaaccagcacccgcagctgcggcttctcctccactcgcagcacgagcaggaggcggga
gacggcggcggcggcggccagggcgacgcggggccgcgaggaggaggaggaggagatgac
aaaggccgcgcctcgcccccggagcagcaggccgcattgtcggcgggccccgctttgacg
ccggaccccgcgggctcccacacaaaggcggcctccgaggcggccgggcccgcggggcct
gaacacgacgacgcggagaaagcgtctgacggtgacaacatcgtcaacaacaacagcagc
agcaaggaggaggaggacggcaggaacagcagcagcagcaacaaagaggaggccgtgccc
ggcgaggaggttgcacctccaccaccacctccaccacctcctcctctcaatctcctggag
tcttgcgctgcctgtggccaggccctgcagaggcgggagcccaagctgctgccatgcctc
cactccctgtgtgccgtgtgcgtgccaccgccgcagccgcatatccccgttcctatggcg
gggccggtcatgaatggacagcctcaccagcagccccaccaccagcagcagcagcatccg
cagcagcacccacaacagcatccacagcaccatcagcagcagcagcatcatcagcagcaa
cagcagcagccaccttcgcctgtggggcccatgtcagtgcaagccatcgtgcgctgccca
atctgccaccaaggatgccagcccaaggacatcgtggacaactactttgtgacagacggc
tcagaggggggagtggcgggcacagagaacagctcacagccgtgcacgagctgcgacgac
ggtgcggacgccgaggggttctgcgtggagtgcctcgagtggctgtgccgcacgtgcatc
gaggctcaccagcgcgtcaagttcaccaaggaccacgccatccggcgcaaggacgacgct
caggacgatgcggcgggcatggccacgctgcggcccgtctactgccccgtccatcgccgg
gagccgctgaagctcttctgcgagacctgcgaccgcctcacctgccgggactgtcagctg
ctgggacacaaggagcacaggtaccaatttgtggaggaggcttcgcagcagcaggtggtg
attatcgagactcttacggccaagctgcaggagaagaagaactacgtgcattttgccgcc
atgcaggtgcagaacagactgaacgaggtcgtggaggcccacaagaaggtggagcacgac
atccgggtggccgtcttcacgctcgtcaacgaaataaacaagaggggcaagtcgctgctg
cagcagcttgagtcggtgacacgtgagcggcaggccaagctgggccgccagcgggacgag
attggcgagctggcgcggcacgtggagcacgtcctcagctttgcgcgcttcgccgtcgcc
agcggcaacagcaccgccctgctctacagcaagcggctggtgacgtaccagctgcgtgcc
atcctaagggcgcgctgcgacccggcgcctgtggccagcagcggcgtcaagttccactgc
gattcctccttctgggccaagaacgtcctcaacctcggcaccctggtggttgagaaccct
cctcccggagcggtgcacgcgtttctacccaacatcgcgcttgcgcaggcaggccggccg
ccccccggcaccgtgccacacatgccggcctccccctccgcgccgggcccccctctcccg
gcctcgctcgcggggccgggggtcccgatgcgtcagcaggcgtcagggggaggacccctg
cagcccccgccactgggcccgccgggctccgggcagatcaacttggctcagctccgtctg
cagcacctgcagcagcgggccatcaagcagcatcagcagcaacagcagcaccagcagcag
cagcaacagcatcagcatcaacagcaacagcagcatcagctgcagcaacaacaccaacag
cagcagcaacagcagcagcaacaacagcagcaacagcagcaacagcagcagcagcaacag
cagcagcaacagcagcagcagcttcgtctggtggccaggcctcagccattgcaaccccac
cgcagagtttcttcgtctgcgtccgtggcggccgctaccgcccttgctaccgggcagccg
gccttcgccactctctctccgaccaacggcgggcagccaccacggctcatcagcgtgcag
tccttccaccgagccacgcagcacttgtcggccacgcaagctcgcgccgtcgctcaaggc
gccggcagcgtccgcatcggggggcagcagcagcagcagcagcctccgggaccacaacag
cagcagccacagcagcagcagcagcagcgggcaccacaggggcccccgcaaaacccggca
cactcgctccgacagcaccccggcagcagtgtccccctcgggggccccttccccgtggtg
agcctccacccgccccccccgccccccgcgcaccccgcgcaccccaagccagcccccctg
gtggcttacgaccacatcccgtctgtgaccaaccctgagaacttgccctccttgccacac
ataccccagatacagtttgaggacgtgtcatcagtgctgaagctggcggcggttcacgcc
aacggggccctagcggacggtgtgcccagccccgcgccccgcctcacctcccccacattc
tccatctccccggggtctgccatgcactcgcccgtgacggtggcgagccagacgcccatc
aggccttccagtgcctccagcactggcagccacggcagctccgcgtcccccaaagtccca
tacgtgcgcctcgagcgaatcaagcacgagcccggcacggcgctcgccgagaggggctcg
gcgtgcggggggcagcagcagcagcaccaccaccaccaccaccaccacgcgttggcatcg
gcgacccccgcgaccgctgcgccccccgcgtccgccaacagcgtgagcgtgaagcaggag
gcggcgctcggcgggggcggcgccgccgggagcgcctgttgcgtgctgagcagccccgac
agcatcctcaccccgccgttgtccaacccgagctgcgagtcgctgcccatccatgccgtg
cgcgtcaaggaggagcggctcgacggcgccgactacgcggcgagctccacgccgcactgc
ggcgctgggcacggccactcccctcgccgacacagccagcccgactccacgaccggcctg
cccggacaccgcggcgccgagggcaccggccggggtgccagcggcgcggacagcagttcg
gcgttgcggagaggagacgagggtgcggggagcgacggcgccgccagcggcggcggcggg
ggggacgatgcggcgcaggagccggcgccggagcagatggccgagggtgccgagggtgcc
gagggcgccgagggcgccgagggcaactgcgccgtgtgcggtgcggacgcccccgtactg
gcctgcgcggagtgcggggggcggtatcacctgacctgtcacgtgcccgtcctctccgag
catcctggcggggactggcgctgtggcctgtgccgcggcccggactgcgaggaagatgcg
gcggagacggcgcgggatggtgtgacagccggcgagcggaggcgctgcgaggtgctgctg
ctgtcagtgctgtgccgcatcaccagcgagcccagcgctccgcgcaccggcgtctcggaa
gctgaaaagcaaatgaatggcacagaagctgatagcgacggaggcggcggtggcgacggt
ggcgacgctccgttgccgggctggctggacgcggtgaggctgcgactccagcccgactcc
gcggagccgtacggcagccccgaggagtttgtgtcggcgctgcgctcgggcctgcgctca
caccgggaccaccgcgcgctggaggctcacgtcacggaccggcttggggagctgttccca
gggccgagcgagacgcacggcacgtgcggcgcagacttggccgaggacgccggcgtggac
gccgcagcagcggaggtggcggacgctgccggcgtgtgcccggacgggctcgcgaccgtg
gacacggcagaggcgtgcggggacccgagcgccgggacgagcgaagacgccgggacgagc
ggcacggcggacgcgtgcgccgacgtgggcgccggcagcgcggacgtgggcggcgcgctg
gatgcggacgccggcgccggagccgacgtggttgaggacgccgaagtggaggtggagacg
gcggaggccgccgaggacgtctcgacgtccgcgggcggcgacgggggcggggacagcgac
gccgaatgcggcgaaccgaaatccaagcgcgccaggctggatcctgccgaaccgggcccc
tag
DBGET
integrated database retrieval system
