Lethenteron reissneri (Far Eastern brook lamprey): 133350325
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Entry
133350325 CDS
T09663
Name
(RefSeq) protein strawberry notch homolog 1-like isoform X1
KO
K26273
protein strawberry notch
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133350325
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133350325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
133350325
NCBI-ProteinID:
XP_061420545
LinkDB
All DBs
Position
4:complement(9483190..9588254)
Genome browser
AA seq
1723 aa
AA seq
DB search
MENPGATTASAHAQAMPGESYHSADAHPHSVFTHLPGPWAAPPSQIVWIQQTEEAAAYPV
CQDSQGLSPGMLPPFAINRLLAQKAMHGSCTESVALPSPDPPLDLSFTAAPLDSSVQSEH
SASRDGLPHEGAAAAASNRAMAAALPSPVDGGQEKRRDATTSISAVEEMELQCDDDAGGG
AQNGGVVYDTDDIEDQQPHSGAPTPFDNPFSAPSFPQLSPAYCSVIHHPLAPSGSGSPGS
LGDESPRGLAHEHPTEDAAPPEHPTRSLIYPEQMFRSSRATFEYVNGDLSAQSSELSDRG
SPDVQLISATGERPRALDYSSSADMSSRQPGAGASYLPPTYCQSAPYFTYGSYFSGMGGS
GGSNNGGPLNLSYQGHGAESGLSPAIAGSSGAPAISTNGNAYSSSSGFDVMGQLGFGCGG
DMAAQSSYLGQNAMGGGCHMQSTANADPLGLDDLEDIDLDGLQEFLQEGTFGQLSHGALD
PALFMSQPPPSLDSVSVRQTDDLISDQQAFANSSAYQGYGSSQLQTSFQASQDMFPQPLP
LVVEKEEEVEEDDADGEDLGHAATYADYTPAKLSIGRNHPDRVVETSTLSSVPLPDITYH
LHMPDYAISSGKLSALQLEAITYSCQRHESILPNGQRAGFLIGDGAGVGKGRTVAGIILE
NYCCGRKKALWFSVSNDLKYDAERDLNDIGARSIPVHSLNKIKYGSTDRRMREGVLFATY
SALIGESFATGTMRTRIKQVLDWCGPEFDGVVVFDECHKAKNLCPVGAAKPTKTGKAVLD
LQNKLPHARVVYASATGASEPKNMAYMSRLGIWGKDTPFNTFDEFLQSIERRGVGGMEIV
AMDMKLSGMYIARQLSFHGVTFRVVEIPLPEQFRNVYDRAVKLWLEMMDKFDRAASVCPD
VSRKSLWGQFWSSHQRFFKYMCIAGKVQQAVTLAHEALKQGKCVVIGLQSTGEARTREEL
ELGNGTIDKFVSAAGGVLKALIKKNFPSGKARVRAAPKRIIRQECADACSKADMKRRRLN
ERCGRKGKLARLKEGASATTVTPAMAALLGCPQARDSDDSGLEFRSEGESDDGGAAASPL
PPLGAPPPMLTMPPYGSATSAAAAMMNAFRTAQQENGGRTIKVEEEDDDDDDVIIITPED
PARAMTSAAAVPIDYSGMLFEMKQDLLRKVDELTKDLPLNTLDELIEKLGGPSIVAEMTG
RKGRIVQKADGKVAYETRAEPGVHIDIVNIKEKQRFMTGEKHVAIISEAASSGISLQADR
RAENKRRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYLFLISELAGERRFASIVAKR
LESLGALTHGDRRATESRDMSRFNFDNKYGREAMEKVLKSLINQIDFHYMVPPPASYEGD
FFEDMRQGLVGVGLITKDYKGNYSIEKGMNQYSHNGVQLGPNQAELGLAKFLNRILGMEV
TKQNAIFQYFIETFEVTIDAAKKEGKYDMGILDLAPGVEEINEEKKHTFKIPSSMGSGQV
VLYTVKVDRGISWNDALERSKKMTGLNDGFYVMKLMRSGRQMAILAEEFDKEKKLFAIYR
PNTGKQRHQEELRDLSRKYDKVTEEEAEDVWKYQYDWSFDSCSHAFWSGRCRNVAALGSC
SHGGRLCLHHVLCGTLLSVWRGVEDAIQQVTNSTSMQIVRLQTKDKRRQVGIKIPENCLS
KVMKVLANQDQALLLARESVIVPYPSSPSALFIDESFPDGLNG
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggagaacccaggtgccaccactgcttccgcgcacgctcaggccatgcccggggagagc
taccactccgcggacgcacacccacacagcgtcttcactcacctccctggcccctgggct
gcgccaccctcccagatcgtgtggatacagcagactgaggaagcagctgcctaccccgtc
tgccaagactcgcagggcctttcaccaggcatgctgccgccattcgccatcaacagattg
ctggcgcaaaaagcgatgcacggcagctgcactgaatcggtcgccctcccgagcccggac
cctcccctggacctgtcgttcacggccgcccccctcgactcctccgtccaatcggagcac
tctgcctcgcgcgacggcctgccgcatgaaggcgccgctgccgccgcgtccaatcgcgcg
atggcggccgctctcccctcgccggtcgacggcggtcaggagaaacggcgcgacgccacc
acctccatctccgccgtggaggagatggagctgcagtgcgacgacgacgccggcggtggt
gcccagaacggaggagtggtgtacgacaccgacgacattgaggaccagcagccacactcc
ggcgcgccgactcccttcgacaatcccttcagcgccccctccttcccgcaactgtcaccc
gcctactgctccgtcatccaccacccgctcgctcccagcggctccggatcgcccggctcg
ctcggcgacgagagcccccgcggcctcgcccacgagcaccccaccgaggacgccgcgccg
ccggagcaccccacccggtcgctcatctaccccgagcagatgttccgctcgtcgagggcg
accttcgagtacgtcaacggcgacctgtccgcacagtcctcagaactgtccgaccgcggc
tcgcccgacgtgcagctcatttccgccacgggcgagcggccgcgcgccttggattactcg
tcgtccgcggacatgtcgtcgcgccagccgggcgcaggcgcgtcgtacctaccgccgacg
tactgccagagcgcgccctacttcacctacggctcgtacttcagtggcatgggcggtagt
ggcggcagcaacaacggcggccctctgaacctgtcgtaccaagggcacggagccgagtcg
ggactctcgcctgcgatcgcgggcagctccggagcgccggcgatttcgacgaacgggaat
gcgtacagctccagctcggggtttgacgtgatgggccagctgggatttggctgcggcggt
gacatggcggcccagtcgagctacctgggacagaacgccatgggcggcggctgccacatg
cagtcgacggcgaatgcggacccgctaggccttgacgatttggaagacatcgacttggac
gggctgcaggaattcctgcaagaaggaacgtttggacagctgtctcatggagccctggac
cctgcgctcttcatgtcgcagcctccgccctctctggactccgtgtcggttcgtcaaaca
gatgacctcatctcagaccagcaggctttcgctaacagctctgcgtaccaaggatatggc
tcaagtcagctccaaacgtcatttcaggcttctcaagatatgttcccacagcctttacca
ctggtggtggaaaaggaggaagaggtggaggaggatgacgctgacggggaggatctgggc
cacgcggcgacgtacgccgattacacgccggccaaactgtccatcgggcgcaaccacccg
gaccgcgtggtggagaccagcacgctgtccagcgtgccgctccctgacatcacctaccac
ctgcacatgcccgactacgccatctccagcggcaagctctccgccctgcagctcgaggcc
atcacttactcctgccagcggcatgagagcatccttcccaatgggcagcgtgcgggcttc
ctgatcggagacggagccggagttggtaaaggccgcaccgtcgctggaatcatcctggaa
aactactgctgtgggcggaagaaagcgttgtggttcagcgtctccaacgacctcaagtac
gacgctgagcgagatctgaacgacatcggagctcgcagcatccccgtgcacagcctcaac
aagataaagtacggcagcacggatcggcggatgcgggagggcgtcctcttcgccacgtac
tcggcgctcatcggcgagagcttcgccactggcaccatgcgcacgcgcatcaagcaggtg
ctggactggtgcgggcccgagttcgacggagtcgtggtgttcgacgagtgccacaaggcg
aagaacctgtgccccgtgggagccgccaagcccaccaagacgggcaaggccgtgctggac
ctgcagaacaagctgccgcacgcccgcgtcgtctacgccagcgccacaggtgcatccgag
ccgaagaacatggcgtacatgagccgcctcggaatctgggggaaggacactcccttcaac
accttcgacgagttcctgcagtcgattgagaggaggggcgtcggcgggatggagatcgtg
gcaatggacatgaagctgagcgggatgtacatcgcccgtcagctcagcttccacggcgtc
accttccgcgtggtggagattccactgccggagcagttccgcaacgtgtacgaccgcgcg
gtcaagctgtggctggagatgatggacaagtttgaccgcgcggccagcgtgtgcccggac
gtgtcgcgcaagtctctgtggggtcagttctggtcgtcgcaccagcggttcttcaagtac
atgtgcatcgcgggcaaagttcagcaagcggtaaccctggcgcatgaggcgctcaagcag
ggcaagtgcgtggtgatcggactgcagtcgaccggcgaggcacgcacccgggaggagttg
gagctcggaaacgggacgatcgacaagttcgtttcggcagctggtggagtcctcaaggct
ctgatcaagaagaatttcccgagcggaaaagcccgagtacgagccgcacccaagaggata
ataagacaggagtgtgcagatgcgtgcagcaaggcagacatgaaaagaagacggctcaat
gagcggtgcggcaggaaggggaagctggcgcggctgaaggagggcgcctcggccaccacc
gtcacgccggccatggcggccctcctgggctgcccgcaggcccgggacagtgacgacagc
ggcctggagttccgcagcgagggcgagagcgacgacggcggcgccgccgcgtctccgctg
ccgccgctgggcgctccaccgcccatgctgacgatgccgccgtacggctcggcgacgtcc
gcggcggcggccatgatgaacgcgttccgtacggcgcagcaggagaacggggggcggacc
atcaaggtggaggaggaggacgacgatgacgacgacgtcatcatcatcacgccggaagac
cccgcgcgagccatgacgtccgcggctgccgtccccattgactactcggggatgctgttt
gagatgaagcaggatctgctgaggaaggtggacgagctgaccaaggatctgcccctgaac
acgctcgacgagctcattgagaagctgggagggccttccatcgtggccgagatgaccggg
aggaaggggcgcatcgtgcagaaggcggacggcaaggtcgcgtacgagacacgcgcggag
cccggcgtccacatcgacatcgtcaacatcaaggagaagcagcggttcatgaccggcgag
aagcacgtcgccatcatttcggaggcggccagctcgggcatctccctgcaggccgaccgg
cgagccgagaacaagaggcggcgcgtgcacatgacgctcgaactcccgtggagcgccgac
cgcgccattcagcagttcggtcgcacgcaccgctccaaccaggtgtcggctccggagtat
ctcttcctcatctcggagctcgccggggagaggaggtttgcctccatcgtggccaagcga
ctggaaagcctgggagcgctgacgcacggagatcggcgagcgacggagtcgcgagacatg
agccgattcaacttcgacaacaagtacggcagggaggccatggagaaggtcctcaaatcg
ctcatcaaccagatcgacttccactacatggtcccaccgccggctagctacgagggtgac
ttcttcgaagatatgaggcaaggtctggtgggagtggggctgattacgaaggattataaa
ggcaactactccattgagaaaggcatgaaccagtactcgcacaatggcgtgcagttggga
ccgaatcaagcagagctgggcctcgcaaagttcctcaaccggattctgggcatggaggtg
acgaagcagaacgccatcttccagtacttcatcgaaacgtttgaggtcaccatcgacgcg
gccaagaaggaggggaaatacgacatggggattttggacctcgcgcccggcgtggaggag
atcaacgaggagaagaagcacacgttcaagatcccctcgtccatgggcagtgggcaggtg
gtgctctacacggtgaaggtcgaccgaggaattagctggaacgacgcgttggaaaggagc
aaaaagatgactggactgaacgacggattctacgtcatgaaactgatgcgctcgggccgg
caaatggcgatcctcgccgaggagtttgacaaggagaagaagctgttcgccatctaccga
ccaaacacggggaagcagcgtcaccaggaggagctccgggacctcagcaggaaatacgac
aaggtcacggaagaggaggcggaggatgtctggaagtaccagtacgactggtcgtttgac
agttgcagccacgccttctggagcggccgctgccgtaacgtggcggcgctcggctcgtgc
tcgcacggcggccgcctgtgcttgcaccacgtgctctgcggcacgctgctgagcgtgtgg
cgcggggtggaggacgccatccagcaggtcaccaactccaccagcatgcagatcgtgcgg
ctgcagaccaaggacaagcggcggcaagttggaatcaaaatcccggagaactgcctgagc
aaagtgatgaaggtgctggccaaccaggaccaggcgctgctgctggcacgcgagtcggtc
atcgtgccgtaccccagcagcccatcggcgttgttcatcgacgagtcctttcccgacggc
ctcaacggctaa
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integrated database retrieval system
