Lethenteron reissneri (Far Eastern brook lamprey): 133350384
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Entry
133350384 CDS
T09663
Name
(RefSeq) transcription factor Sox-5-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133350384
Transcription factors [BR:
lrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133350384
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Exonuc_VII_L
FapA
Motif
Other DBs
NCBI-GeneID:
133350384
NCBI-ProteinID:
XP_061420693
LinkDB
All DBs
Position
33:15332791..15611289
Genome browser
AA seq
724 aa
AA seq
DB search
MSGREATSPLGAEREAAGAGGGCARSAGSRGGEERDACFGRAPYSAHGLLYAGPDELPWG
APDVFVNSKASGSDSPPKSEEGGRESGAGGALGTPERRKGSLADVVDSLKQKKLEELTRG
DHHDASCVEQLLAKDWKERMLGMSSGDVAAEMQGSAEGLAEREHQLAGMISQLSSLREQL
LAAHDEQKKLATSQLEKQRQQMDLARQQQEQIARQQQQLLQQQQKINVLQQQIQQVQGHM
SPLMIPIFPQDQRALAAMTAAQQGLFLSPGFSYKPGDPFHMQFIPSAMSAAASSGLSPLQ
LQQLYAAQLAALQLSPGAKLHGVPPSGLPGSPSGHPQLHDKPKGSPPPKPKEDSSQPLNL
SAKPKSGEGSRSPDNAASSPPLHMFKCSSASLLRKPPPLPTTLSSPPSRTLPLDVLSSLH
PTSFLGEHEGLGRGGAHESSRSSDGKLSLAVGINHCLNERDKVMLSPLMHQLSGKAADDG
PFRHSVIDLTSANEDMEGSNSMSDARVFRESRSRGSNEPHIKRPMNAFMVWAKDERRKIL
QAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKLHLEKYPDYKYKPRPKRTCIV
DGKKLRIGEYKALMRNRRQEMKQFYNVGPQSQLPMSSASMVYPGTFAMASSAPSPQISER
SSGSGSPQSGLPPPVFANMSYGLGAPAVQPKEELNGDDSEMYEYEDEEAVEYSSGNEQES
EHHA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctggccgggaggcaacgtccccactgggtgccgagcgagaggcggcgggagcagga
ggaggctgcgcgcggtccgcggggtcgcgcggcggcgaggagcgcgacgcctgcttcggc
cgggccccctactcggcgcacggcctgctctacgcgggccccgacgagctcccctgggga
gcccccgacgtcttcgtcaacagcaaagcgagcgggagcgactcgccaccgaagagcgag
gagggcggccgggagagcggagccgggggcgccctggggacccccgagcggcgcaagggc
agcctggcggacgtggtggactcgctcaagcagaagaagctggaggagctcacgcgcggc
gaccaccacgatgcctcctgtgtggagcaacttctggccaaggactggaaggaacggatg
ctgggaatgagctctggagatgttgccgctgagatgcaaggctcggcggaggggctggcg
gagcgcgagcaccagctcgccgggatgatctcccagctgagcagcctgcgcgagcagctc
ctggccgcccacgacgagcagaagaagctggccacctcgcagctcgagaagcagcggcag
cagatggacctcgcgaggcagcagcaggagcagatcgctcgccagcaacagcagctcctg
cagcagcaacagaagatcaacgtgctgcagcagcaaatacagcaggtccagggtcacatg
tctcccctcatgatccccatcttcccacaagaccagcgggcactggcagccatgacagca
gcccagcagggactcttcctgtctccgggattctcctacaaaccgggtgaccctttccac
atgcagtttatcccgtcagccatgtctgccgcagcctcctcgggactgagccctctccag
ctgcagcagttgtacgcggcccagttggcagccctgcagctctccccgggtgccaagctg
cacggggtgccgccgtcaggcctgcccggctctccgtctgggcacccgcaactccacgac
aagcccaagggcagcccgcctcccaaacccaaggaagactcatctcagcccttaaacctc
tcggccaaacccaaatctggtgagggttccaggtccccggacaatgcagcatcctcccca
ccactgcacatgttcaagtgcagcagcgccagcctcctacgcaagccaccgcccctgccc
accaccctcagctctccgcccagccgcacgcttccccttgatgtgctgtcgtcgctgcac
cccacgtccttcctgggcgagcacgagggcctgggccgcggcggcgctcacgagtcgtcg
cgctcctccgacggcaagctctccctcgccgtggggatcaaccactgcctcaatgagagg
gacaaagtgatgctgtcacctctgatgcaccagctatctgggaaggcggcagacgacggc
cctttccgccacagcgtcatcgacctgacaagtgcaaacgaagacatggaaggaagcaac
tccatgtcggatgcaagagtattccgcgagtcaagaagcagagggagcaatgaacctcac
atcaagcggccgatgaatgcgttcatggtctgggcaaaggacgagaggcggaaaatcctt
caagctttcccggacatgcacaactcgaacataagcaagatactaggctcacgctggaag
agcatgtccaaccaggagaagcagccatattacgaggaacaagcgcgcctgagcaaactg
cacctggagaagtatcccgactacaagtacaagcctcgccccaagcgcacgtgcatcgtg
gacgggaagaagctccgcataggcgagtacaaggctctgatgcgcaatcggcgccaggag
atgaagcagttctacaatgtgggcccgcagtcccagttgcccatgtcctcggccagcatg
gtctaccctggcaccttcgccatggccagctcggcaccgtcgcctcagatctcggagcgc
tccagcggctcgggcagccctcagtccggcctgcccccccccgtctttgccaacatgagc
tacggcctgggggcaccggcagtgcagcccaaggaggaactcaatggggacgacagcgaa
atgtatgagtatgaggatgaggaggctgtggaatacagcagtgggaatgagcaggagagc
gagcaccacgcctag
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