Lethenteron reissneri (Far Eastern brook lamprey): 133350619
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Entry
133350619 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: extracellular matrix organizing protein FRAS1-like
KO
K23379
extracelluar matrix protein FRAS1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04512
ECM-receptor interaction
lrj04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133350619
04518 Integrin signaling
133350619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
133350619
NCBI-ProteinID:
XP_061421144
LinkDB
All DBs
Position
34:7278025..7333270
Genome browser
AA seq
2727 aa
AA seq
DB search
MQMTLVLLWTLAVITGAQPKKAGDGPVLLTNALVHVPEGGMFQITNMQLRAASGDASDSE
ILFMLTPEHDNPPFGDVVLLVPMPADGPSDGWELLPDGRAATPTTSFTQQDINEGIVWYR
SAAGTLSPRDAFTFTVTDGAKPPHVLSGQVFHVGIIPQHDSPPQLSPGVPSPLRMLAAKD
QITVIQSNYLSFVDNSGSEYLLYNVTQLIPPEYGALEHADRPGHSVTLFTQADVDMGKIV
YRPGYARTVPGPATAFRFTVSDGANTSPETEFTLQLYTPSKLPPVFQQASPAIHLSQGGT
APIGLEQLSAEDADSGPEELLFSVLEAPSHGLLTKYTAGRHLTLASGDVFTHDDLARSAL
HYVHDGNGVSGDDAASFSVSDGVATATVAVTVVVAPSDGQGPRQAPGTQLSITLPEKGTA
TITAAELAYSAGDSPAGQVRFMLTSVPMYGLLVISAAPGVEHELSDFSIFSMEDINGNRI
KYKTDFDLGGDPITDLFYFSVTDGQGNRLENQIFTLTITPGGNQPPSLTLTPSLKVDEGG
KVMISSNDIMATDADTPKQELVVKITDAPKLGYIVNTKSGPASARRSESSFSMQDVMDAA
VFYVQSVHRETEPVYDAFRLHVTDGHSASPSYLFNISIQRSNDEPPKLVTGTVACRPGEA
IVLREDAISVKDMDTPGPELVLTITHKPQHGKLSRKARRSERAGDGELAQGSTFTFQDVV
DGLLSYTHDGTDGAVDEFRLSVSDGAHSQNGRVAVSVEQSRSEIPRMAINRGLQIQAASA
TTITAQQLQATDVDSDTLQLKFFVVRDAPVGHLLLAQAGPKAGSKGQQTQQQVSVKGPVK
SFTQADINKGLLEYRHNKGEDGGSFAFKFDIVDQEGNKLIDQSFHITILEDRLPPVVEVN
KELVVEENSVAKLGTEVLSVTDADTEPGQLLYRVARGPSLGRLEMLANPGRAITSFSQAD
LAARRVQYVHTSSQEKHDDDFTFTVSDGSNEVRQTMQIRIAPVDDSLPVVQSLGMRVQEG
VRKPITEFELKATDADTQPDSITFTVVQPPRHGAIERGTGGGAGGLAGAGWQAASIFTME
DVYQGRVSYSHDGSNTLRDNFAFTVGDGTNPLFVLREGSAEVVTALPQKFQIEILPVDDG
TPRIVTNLGLQWLEYIEGKAANHITKKELLTLDPDTDDTQLVYEVTSNPKHGHLENKLKL
GVPVKAFTQEEVNLGVLRYVLEEGKVEETVDSFRFSVRDSKPNMVSDNVFHIQWSIISFQ
HRRYNTSETAGTVSVTVKRRGNLNQYAIVLCRTEPGTATSSSGAGSRRGAHDYVEYAAQV
QFEEREDTKTCTIVVNDDAVFEGEERFGVELSMPAYALLGERTRAAVAINDTEDEPTLQF
DTRLYRVNESDGTLQATVIRKGDTSSTVSAVCHTVSGSARGSGAGLLASGSDFVSRQRGE
ESRLVLAPGVTAASCAVTIVDDSESEPEEDFQVALAEPSPNARLGERTTARVVIAGPNDA
SLVHLGDSAFSVSEDAGTVDIPVVREGSDLSAAASVWCATRPSEPLSATPAIDYVATSRQ
VLFAPGRRDGTCTITILDDTQHPVIEGGETFVVFLSSPQGVQLTEPSHATVLINDTYQDI
PSVQFGKEGYAVQESEGSISVPVLRSGDLSAQSSVRCFTRRGSARVDHDYTERPDTDASR
ITFLPGEKTKNCTVRIVDDTEFEGDEEFRLHLGSALGSQSSGAKIGKNDVAIITITNEED
APTIQFEEASYQVREPSGPDGMAILTILVLRSGDRNKTSKVRCSTRDGSAQSGMDYNPKS
RILKFLPGVEQMEFPVEILANEDREWHESFSVVLGPDDPVEAVLGDITTATVTILDQEAT
GSLILPAPPIVVSLADYDSVEEVMKEGSKKDPSPGYPLVCVTPCDPHYPKYSLTRERCEE
AGINQSALYFSWEVSSPTDANGARSPFETVTDHTPFTSVNHKVLESVYFGRRFHVRCVAQ
ARDKKGQAGTPLRSNTVTVGTDNSICHTPVSAGSARALQAQSFIANLEYLDVKHKEHPNR
IHISIQXPHQDGMLPLISTMPIHNLHLLLSESIYRQQHVCSNLVSLRNLREAGFLDEEKA
ETLVLGPGFDRPYQFDGSVREPRTIQLYRHLNLKSCIWTFDAYYHMTELIDVCGGSVTAD
FQVRDSAQSFLTVTVPLYVSYIYVTAPRGWASLEHHTEMEFSFFYDTVLWRTGIQTDSVL
SARLQVIRIYIREDGRLVIEFKTHAKFRGQFVMEHHTLPAQKSHLAPPDHLGGIELELEL
VWSAQTFDSPYQLWRATSSYNRKDYSGEYTVYLIPCTVQPTQPWVDPGTKALSCTAQAPE
KFLLPISFQQTNRPVPVVYSLNTEFHLCNNDKVFLLDPGKSDVALPEMDYKGAFSMGQTL
YGRVLWNPDQNLKSAYKLQLEKVYLCTGRDGYVPFFDPTGTIYNEGPQYGCIQPNKHLKH
RFLLLDRNHPEAVDRYFHDVPFEAGFASDVPEFQALWDMPGVDGFSMKVDALYKVAAGHQ
WYLQVIYLIGPESHGPRLRRSASIGLPSRRQRRDLLDRDGKLALHDSVIYDEDESLGAGD
TDVRNGTNMKTLQLQQTGAAASLGPGSSGATAAAVVSALAVAVAVATCLVCVAARRRRAR
AKEGGTGRRAKVPVDYPLNTKVAAADAKRVDESERPLNPARPSALVKNVNLLNKNDDVEL
ARVKGVKVKRVNLEVKVQNNLHDGTEV
NT seq
8181 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgacactcgttttgctgtggacacttgctgtgatcactggagctcaaccaaaa
aaggctggcgatggcccggtgctgctcaccaacgctctcgtacacgtgccggaaggcggc
atgtttcagatcaccaacatgcagctgcgggccgcctcgggtgacgccagcgattcggag
atcctcttcatgctcaccccggagcatgacaaccctcccttcggcgacgtggtgctgctg
gtgccgatgccggcggacggcccgtcagacggttgggagctgcttcccgatggacgcgca
gccacccccactacgtccttcacgcagcaggacatcaacgagggcatcgtttggtaccgc
agcgcagccggaacgctctccccacgggacgccttcactttcacggtgacggacggagcc
aagcctccccacgtgctgtcgggccaagttttccacgttggcatcatccctcagcacgac
tcgcccccacagctctctcccggcgtgccctcccctctccgcatgctggcagcgaaagac
caaatcactgtcattcagtcaaactacctctcctttgtggataactctggcagtgaatac
ttgctgtacaacgtaacccagctcatcccacctgagtatggggcgctggaacatgcagac
aggccgggccactccgtcacgctcttcacgcaggccgacgtcgacatgggaaagattgtg
taccgtcctggatatgcacggaccgtcccagggcccgccacagccttccgcttcaccgtg
tctgacggtgctaacacctccccggaaaccgagttcacgttacagctctacactcccagc
aagctaccgccagtgttccagcaggccagccccgccatccacctctcacagggcggcaca
gcacctattggcttggagcagctgtctgcagaggatgctgactcgggtccggaggagctt
ctcttctccgttctcgaggcaccgagccacggacttctgactaaatacacagctggcagg
catctcaccctggcttcaggcgacgtatttacccacgacgacctcgcgaggagcgccctg
cactatgtgcacgacgggaacggcgtgagcggcgacgacgccgcctcgttcagcgtgtcc
gacggcgtcgccacggcgactgtcgcggtgactgtggtcgtcgcgccatccgacggccaa
ggaccacggcaggcccccggaacacagctgtcgatcacgctgcccgaaaaaggcaccgcg
accatcactgcggcggagctggcttactccgcgggcgactctccagcaggccaggtgcgc
ttcatgctcacgtcggtgcccatgtacgggctgctcgtgatcagcgcagcccccggtgtg
gagcacgagctctcagacttctccatcttctccatggaagacatcaacggcaacagaatc
aagtacaagactgactttgacctgggaggggatcccatcacagacctgttttacttctca
gtgacagacgggcaggggaatcggcttgagaatcagatcttcacactcaccatcacccct
ggaggaaaccagccgcccagcttgacactcacaccctcgctcaaggtagatgaaggaggc
aaagtcatgatttcttcgaatgacatcatggcaacagatgccgacactcccaagcaggaa
ctggtggtgaagatcactgatgctccgaaacttggctatatcgtcaacacgaaatctgga
ccggcgagtgcccgccgctcggagagctctttctccatgcaggacgtgatggacgccgcg
gtgttctacgtgcagagcgtgcaccgtgagacggagcccgtgtacgacgcgttccggctg
cacgtgacagacgggcacagcgcctcgccctcgtacctcttcaacatctcgatacagcgc
agtaacgatgagcctcccaagctggtgacggggacggtcgcctgccgccccggcgaggcc
atcgtcttgcgggaagacgcgatctccgtcaaggacatggacacaccgggccccgagctg
gtgctcaccatcacccacaaaccccagcacggcaagctgagccgcaaggctcggcggtcg
gagagagccggcgatggggagctggctcagggctccaccttcacgttccaggacgtggtg
gacgggctgctgtcctacacgcacgacggcacggacggcgcggtggacgagtttcggctg
tccgtgtcggacggagcgcactcgcagaacggccgtgtcgcggtgtccgtggagcagtcg
cgctccgagatcccgcgcatggccatcaaccgtgggctgcagatccaggccgcttcggcc
actacaatcacggcccagcagctgcaagccacggacgtcgactcggacactctgcagctc
aagttcttcgtggtccgtgacgcgcccgtgggccatctgctgctcgcccaagccgggccc
aaagctggctcgaagggccagcaaacacaacagcaggtctctgtcaagggccccgtcaag
agcttcacacaggccgatatcaacaaagggctgcttgagtacagacacaacaagggggag
gacggtggaagctttgccttcaagtttgacatcgtggatcaagagggaaacaagctcatc
gatcagtccttccacatcaccatcctagaggaccgccttccgcccgtggtggaagtgaac
aaggagctggtggtggaggagaactccgtggccaagctgggcacggaggtgctgtctgtg
actgacgcggacacggagccgggacagctgctctaccgcgtcgctcgggggccttcgctc
ggccgccttgagatgctcgccaatccgggccgggcgatcacgtcgttctcgcaggcggac
ctggcggcgcggcgcgtgcagtacgtgcacacaagctcgcaggagaagcacgatgacgac
ttcaccttcaccgtgtctgacggcagcaacgaggtgaggcagacgatgcagatccgcatc
gcgcccgtagacgattcgctgcccgtggtgcagagcctcggcatgcgcgtgcaggagggc
gtgcgcaagcccatcaccgagttcgagctcaaggccacagacgccgacacgcagccggac
tccatcacgttcacggtggtgcagccaccgcgacacggcgccatcgagcgcgggaccgga
ggaggggcagggggcctggccggcgctggctggcaggcggcctccatcttcaccatggag
gacgtgtaccagggccgtgtgagctacagccacgacggctccaacacgctgcgcgacaac
ttcgcgttcaccgtcggcgacggcaccaaccccttgttcgtgctcagggagggcagtgct
gaggtggtgacggccttgcctcagaagttccagattgaaatcctcccggtggatgatggc
acaccccgcatcgtgaccaacctgggcctgcagtggcttgagtacatcgagggcaaggca
gccaatcacatcaccaaaaaggagctgttgacccttgaccctgacacggatgatacccag
ctggtgtatgaagtgacctctaaccccaagcatggacacctagagaacaagttgaagctc
ggcgttcccgtgaaagccttcacccaagaggaggtgaacctgggcgtgctgcgctacgtg
ctggaggaaggcaaagttgaggagaccgtggactcgttccgcttctctgtgcgcgacagc
aagcccaacatggtcagcgacaacgtgttccacatccagtggtccatcatcagcttccag
caccgcaggtacaacacgagcgagacggcgggcacggtcagcgtgacggtgaaacggcga
gggaacctcaaccagtacgccatcgtgctgtgccgcaccgagcccggcacggccacgtcc
tcctccggcgccggctcacggcgcggcgctcacgactacgttgagtacgcggcgcaggtg
cagttcgaggagcgcgaggacaccaagacgtgcaccatcgtcgtgaacgacgacgccgtg
ttcgagggggaggagcgcttcggcgtggagctcagcatgccggcgtacgcgctgctgggc
gagcgcacacgcgccgccgtcgccatcaacgacacggaggacgagcccacgctgcagttc
gacacgcgcctctaccgcgtcaacgagagtgacggcaccttgcaggccaccgtcatccgc
aagggcgacacgagcagcacggtgtcggccgtgtgccacacggtgtcgggctccgcgcgc
ggcagcggcgcggggctcctggcgagcggctccgacttcgtgtcgcggcagcgcggcgaa
gagtcgcgcctcgtgctcgcgcccggcgtcacggccgcctcctgcgccgtcaccatcgtg
gacgacagcgagagcgagcccgaggaggacttccaggtggctctggcggagccgtcaccc
aacgcgcgtctgggagagcgcacgacggctcgcgtcgtcatcgccggccccaacgacgcc
tccctcgtccacctgggagactcggcgttcagcgtcagcgaagacgcaggcacggtggac
attcctgtggtgcgggagggatcggacctgtcggcggccgcctcggtgtggtgcgccacc
cgtccctcggagcccctctctgccactccggccatcgactacgtggccacctcacgccag
gtcctcttcgctcccgggagacgggacgggacctgcacaatcacgatcctggacgacacg
cagcacccggtgatcgagggcggcgagacgtttgtggtgttcctgagctcgccgcagggc
gtgcagctcacagaaccgtcccacgctaccgtgctgatcaatgacacctatcaggacatt
cccagcgtgcagtttggcaaagagggctacgcggtgcaggagagcgagggctccatctcg
gtgcctgtgctgcgcagcggcgatctcagtgcgcagtcgtccgtgcgctgcttcacacgc
cgtggctcggcgcgcgtcgatcacgactacacggagcggccagacacggatgcctcccgc
atcaccttcctgcccggcgagaagaccaaaaattgcacagtgagaattgtggacgacacg
gagtttgagggcgatgaagaattccgtttgcacctcggctcggcgcttggctcacaatcg
tccggtgccaagatcggcaagaacgatgtcgccatcatcaccatcaccaacgaggaagat
gctcccaccattcagtttgaagaggcgagctaccaggtgcgcgagccgtccggcccagac
ggcatggccatcctcaccatcctcgtgttgcgctcgggcgaccgcaacaaaacctccaag
gtgcgctgcagcacccgcgatggatcggctcagtccggaatggactacaaccccaagagc
cgcatcctcaagttcctgcctggcgtggagcagatggagttccccgtggagatcctggcc
aatgaggaccgcgagtggcacgagtccttctccgtggtgctggggccagacgaccccgtg
gaggccgtgctgggagacatcaccacggccacggtcaccatcctggaccaggaggccaca
ggcagcctcattctgccagccccaccgatcgtggtgtccctcgccgactacgacagcgtc
gaggaggtgatgaaggagggctccaagaaggacccgtcgccgggctacccgctggtgtgc
gtcaccccgtgcgacccgcactaccccaagtactcgctcacgcgcgagcgctgcgaggag
gcgggcatcaatcagtcggcgctgtacttcagctgggaggtgtcgtcccccacggacgcc
aacggagctcgctcacccttcgagacggtcaccgaccacactccgttcacgagcgtcaac
cacaaggtgctggagagcgtctacttcgggcgccgcttccacgtgcgctgcgtggcgcag
gcgcgcgacaagaagggccaggcgggcacgccgctgcgcagcaacacggtcaccgtgggt
acggacaacagcatctgccacacgcccgtgtcggccggctcggcgcgcgccctgcaggcg
cagtccttcatcgccaacctcgagtacctggacgtcaagcacaaggagcaccccaacagg
attcacatctcgatccatccgcaccaggacgggatgctgcctctcatctctaccatgccc
attcacaacctgcacctgctgctctccgagtccatctaccgccagcagcacgtgtgctcc
aacctcgtctccctgcgcaacctccgagaggctggattcctggacgaagagaaggcagag
acgctggtgctggggccgggctttgaccggccgtaccagttcgacgggagcgtgcgcgag
ccgcgcactatccagctctaccgtcacctgaatctgaagagctgcatctggaccttcgat
gcctactaccacatgacggagctcatcgacgtgtgcgggggctccgtcaccgccgacttt
caggtgcgagactcggcacaatccttcctgacggtcacagtgcctctctacgtctcgtac
atctacgtaactgctccacgcggctgggcctcgctggagcaccacaccgagatggaattc
tcattcttctacgacactgtgctctggaggaccggtatccagacggacagcgtcctctct
gcaaggctccaagtcatccgcatctacatccgcgaggatgggcgactcgtgattgagttc
aagacacacgcaaagttcagaggccagttcgtcatggagcaccacactctgccggcacag
aagtcccacctggctccacccgatcacctggggggcatcgagctggagctggagttggtg
tggagtgcccagacctttgactcgccctatcagctgtggcgtgccaccagctcctacaac
aggaaggactactcaggggagtacaccgtgtatctgattccatgcacagtgcagcccaca
cagccgtgggttgacccaggcaccaaggccctgtcctgcacggcacaggcaccagagaag
ttcctgctgcccatctccttccagcagacaaaccgaccggtgcccgttgtgtactcgctc
aacaccgagttccacctgtgcaacaacgacaaggtgtttctgctggatcccggcaagtca
gacgtggccctgcccgagatggactacaagggcgccttctccatgggtcaaacgctgtat
ggccgtgtgctctggaaccccgaccaaaacctcaagtcggcgtacaagctgcagctggag
aaggtgtacctgtgcacggggcgcgacggatatgtcccgttctttgacccgacgggaacc
atctacaacgaggggccgcagtatggctgcattcagcccaacaagcacctgaagcaccgc
ttcctgctgctggaccggaaccaccccgaggcagtggaccgttacttccacgacgtgccc
tttgaggcgggcttcgcgtccgacgtgccggagttccaggcgctgtgggacatgcccgga
gtggatggatttagcatgaaggtggatgccctctacaaggtcgccgccggacaccagtgg
tacctgcaggtaatttacctgatcgggccagagtcgcacggcccccgcctacgccgctcg
gcgtccatcggtcttccaagccgccgccaacgccgcgacctgctggaccgcgacggcaag
ctggcgctccacgactcggttatctacgacgaggacgagagcctgggcgctggcgacacc
gacgtccgcaacggcaccaacatgaagacgctgcagctgcagcagaccggcgcggccgcc
tccctggggcccggctcgagcggcgcgacggcggccgccgttgtctcggccctggccgtc
gccgtggcggtcgcgacgtgcctggtgtgcgtggcggcgaggcgcaggcgcgccagggcc
aaggaaggcggcacgggcaggcgcgcgaaggtgcctgtcgactacccgctcaacaccaag
gtggcggcggcggacgccaagcgggtggatgagtcggagcgcccgctcaaccccgcacgc
ccgagcgccctggtgaagaacgtcaacctcctgaacaagaacgacgacgtggagctcgct
cgagtcaagggagtcaaggtcaaaagggtcaacctagaggtcaaagttcagaacaacttg
catgatggcacagaggtgtga
DBGET
integrated database retrieval system
