Lethenteron reissneri (Far Eastern brook lamprey): 133350638
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Entry
133350638 CDS
T09663
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133350638 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133350638 (HERC4)
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133350638 (HERC4)
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
HECT type E3
133350638 (HERC4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
133350638
NCBI-ProteinID:
XP_061421211
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All DBs
Position
34:complement(7921999..7981935)
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AA seq
1060 aa
AA seq
DB search
MLCWGNTSFGQLGLGGIDEEIVKEPRRCTFFAGSSGGRAAGLRAVACGRRHTLFLMEDAT
VYSCGCNDLGQLGHDKTRKKLEQVSSLDTQTIVAVACGDSHTLALNDKGQLFAWGQASEG
QLGLPGTDEIVRVPRHVKTLAEVPIVQVACGHHHSLALAKDGRLFTWGSNRYGQLGVGSF
RGSQRTAQLVHTLQGVPLARLTAGKAHSLALTCSGAVFAWGQNNFGQLGLSDEIDKCYPA
LLKSLRTQKVVYICCGEDHTAILTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGS
IVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVQGAWMPHNGPCPS
NVEKEECCIVKRIFAGGDQSFAHYFPPEDSVEPDDFRLAEPHMQVCVLSGPLLEKWASLP
SGRLPSDVVNEIDMIFSSPSCINGSFLAYGSDEHYRTSGKVSGLDMNAMRRAFNKLLQSP
CTQILQQMAASLEKNLIPQLSTAPPDVEAMRLYLVLPEFPLMHDERNFSTLAISFAMAIT
KLGPTPAKVLENWWSMLTPPFFLKLVELYKAVVVFLLKLHKMGVPPAEEPIFQASLRSAL
VVLQILHRANTRTSVIQYDKFYIGEICDLVDIRRDYIAWIQQQAYRVDVNSAMAEEVPVT
LCSFPFVFDAQAKTTLLQTDAILQMQVAVDEATRRNFSSMFMPIDPENPCLVLMVRRDNI
VGDTLEMLRKQAKNLDFKKPLKVIFYGEDAVDAGGVRKEFFLLIMKDLLDPKYGLFKYYE
ESRLIWFSQQTFEDSNLFNLIGLICGLAIYNSTIVDLNFPLALYKKLLKVEPTLEDLKEL
MPDVGRSLQQLLDYPDDDVEETFCLNFTVAFENFGAMEVKELVPGGSDMVVNNANRQDFV
NAYVDYIFNKSVQQLFEAFHTGFHKVCGGKVLQLFQPSELMAMVIGNTDYDWAELEKNTE
YKGEYWAGHPTIKSFWEVFHDLDLELKKKFLLFLTGSDRIPILGMKSLKIVIQPTGGGEQ
FLPVAHTCFNLLDLPKFSGKAQLREKLLQSITHYQGFSLA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaacacgtcgttcgggcagctgggcctcggtggcatcgacgaggag
atcgtcaaagagccgcgccgctgcaccttcttcgcgggcagcagcggcggccgtgccgcg
ggcctccgggcggtcgcctgcggccggaggcacacgctcttcctcatggaggacgccacc
gtctacagctgcggctgcaacgacctgggccagctggggcacgacaagactcgcaagaag
ctcgaacaggtgagttccttggacactcagaccattgtggcggtggcgtgcggagactct
cacacgctcgctctcaacgacaagggacagctctttgcctggggccaggcatccgagggc
cagctcggtctgccaggaacggacgagatagtgcgtgtgcccaggcatgtgaagacattg
gcagaggtaccaattgtgcaggtagcctgtggacaccatcactcactggcgctcgcaaaa
gatggtcgcctcttcacgtggggcagcaaccgctatgggcagcttggcgtgggcagcttc
aggggcagccagcggactgcgcagctcgtgcacaccctgcagggtgtgccgctggcgcgc
ctgaccgccggcaaagcccacagcctggcgctcacttgctccggcgccgtcttcgcctgg
ggacaaaacaacttcgggcagctgggtctcagcgatgagatcgacaagtgctaccctgct
ctactgaagtccctccgcacacagaaagttgtttatatctgctgtggagaggaccatacc
gctattcttactaaggagggcggggtgttcacatttggcgcgggcggctacggacagctg
ggccacaactccaccaaccacgaggtcaacccacgcaaggtgtttgagctcatgggcagc
atcgtcacgcagattgcgtgcggcaggcagcacacgctggcgttcgtgccatcctcgggg
aggatctactccttcggcctgggagggaatggtcagctgggaacaggctccaccagcaat
cgcaagagcccgttcacggtgcagggcgcctggatgccacacaacgggccgtgcccctcc
aacgttgaaaaagaagagtgctgcattgtaaagagaatatttgccggaggagatcaaagt
ttcgcgcattactttcctccagaggactctgtggagccagatgacttccggctggcggag
ccccatatgcaggtgtgtgtgctgtctggccctctgctggagaagtgggcctctctgccc
agcggacggctgccgtccgacgttgtcaatgagatagacatgatattctcctctccaagc
tgtatcaacggaagcttcttggcctatggatcagacgagcactacagaacgagtgggaag
gtgtcgggtttggacatgaatgccatgcgccgtgccttcaacaagctcctgcagagccca
tgcacgcagattctgcagcagatggcagccagcctggagaagaacctgatcccccagctg
agcacggcccctccggacgtggaggccatgcggctctacctggtgctgcccgagttcccg
ctgatgcatgacgagcgtaacttctccacgctcgccatctccttcgccatggccattacc
aagctgggccccacgcccgccaaggtgctcgagaactggtggagcatgctgacgccaccc
ttcttcctcaagctggtggagctctacaaggccgtggtggtgttcctcctcaagctgcac
aagatgggcgttcctcccgccgaggagccaatcttccaggcctcgctgcgctccgccctc
gtcgttctgcagatcctgcaccgggccaacacacggacgtcggtgatccaatacgacaag
ttttacatcggggagatctgcgatctggtggacatcaggagagactacatcgcgtggata
cagcagcaggcctacagagtggatgttaactctgcgatggcagaggaggtgccggtgacg
ctgtgcagcttcccgtttgtgttcgacgcacaggccaagaccacgcttctgcagactgat
gccatcctgcagatgcaggtcgccgtggatgaggcgacacgccgcaacttctccagcatg
ttcatgcccatcgaccccgagaacccctgcctggtgctcatggtgcgcagggacaacatc
gtgggcgacacgctggagatgctgcgcaagcaggcgaagaaccttgacttcaagaagcct
ctgaaggtgatcttctacggggaggatgccgtggatgcgggaggagtgaggaaggagttc
ttcctactcatcatgaaggacctcctggacccaaagtatgggctcttcaagtactatgag
gagtcgcgactcatctggttctcacagcagacgtttgaggacagcaacctgttcaactta
attggtcttatctgtggcctggccatctacaactccaccattgtggacctcaactttcca
ctggcactctacaaaaagctgctcaaggtggagcccacgctggaagacctcaaggagctc
atgcccgacgtgggcaggagtctgcagcaactcctagactaccccgacgatgacgtcgag
gaaaccttctgcctcaacttcacggtggcctttgagaacttcggagcgatggaagtaaag
gaactggtgcctggagggtcagacatggtggtgaacaatgccaacaggcaggactttgtg
aacgcttatgtcgactacatctttaacaagtcggtgcagcagctgtttgaggcattccac
acgggctttcacaaggtgtgcggtggcaaggtgctgcagctcttccagccgagcgagctc
atggcgatggtgatcggcaacaccgactacgactgggctgagctggaaaagaacacggaa
tataagggcgagtactgggctgggcaccccacaatcaaatcattttgggaggtgttccat
gacctggacctggagctcaagaagaagtttctcttgttcctgactggaagcgatcgcatt
cccatcctcggtatgaagagcctcaagattgtgattcagccgacaggtggtggggagcag
tttctacccgtggctcacacctgttttaatcttctggacttgcccaagttctccggcaaa
gcgcagctcagggaaaaactacttcagtccatcacgcattaccagggattcagcctggcg
taa
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