Lethenteron reissneri (Far Eastern brook lamprey): 133350820
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Entry
133350820 CDS
T09663
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133350820 (RBM39)
Spliceosome [BR:
lrj03041
]
Common components
Common spliceosomal components
General mRNP proteins
133350820 (RBM39)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
133350820
NCBI-ProteinID:
XP_061421560
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Position
35:complement(3471839..3499526)
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AA seq
533 aa
AA seq
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MAEDFDIEAMLEAPFQKTEATKVGEANGHPLTDTKKKKSKSRSRSRDKKRSRSRDRRRRK
SRERRRRSRSRSRDRTRHREERGRFRSPIYGRKPENPDETHAGQGENIQTSHRKAPESGN
EPRPFLLHKRSRSKSRSPRGKFGNAPRPSTSTLTPEERDSRTVFCMQLAARIRAKDLEEF
FSAVGKVRDVRLISDRNSRRSKGIAYIEFVDLDSVPLAIGLTGQRLLGVPIIVQASQAEK
NRAAAAAAANLQKLASGPMRLYVGSLHFNITEAMLMGIFEPFGKIDNIQLMMDPETGRSK
GFGFITFASADCAKKALEQLNGFELAGRPMKVNYVSDHSDVIISVGSGGGGSSFLDNDEL
ERTGIDLTNTGRLQLMAKLAEGSGLTIPPVAQQALQMNGAIPLEALMPSLAASMNPTFTM
SPTIATQCFQLSNMFNPQSEVNSSWVQEIRDDVVEECNKHGGVVHIYVDQNSAEGHVYVK
CPNIPVALAAVNSLHGRWFAGKMITAAYVPVPTYHNLFPDSMNALQLLTPMRR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagactttgacattgaagccatgctggaggcacctttccaaaagacggaggcc
accaaagtgggtgaagcgaatggacacccgctaaccgacacaaagaaaaagaagagtaag
agtcgcagcagaagcagagacaagaagaggagccgcagccgagatcggcggcgcaggaaa
agccgcgagcgccgccgccgcagccgtagtcgcagccgggaccgaacccggcaccgcgag
gagcgtggacgcttccgcagcccaatctatgggaggaaaccggagaaccccgacgaaacc
catgcaggacagggggagaacatacaaacttcacacagaaaggcgcccgagtcgggaaac
gaacccaggcccttcttgctccacaaacgctcccgtagcaagagcagaagcccgagagga
aaatttggaaatgccccaaggccatccaccagcacgctcaccccggaggagagagacagc
cgcaccgtgttctgcatgcagcttgcagcgcgcatccgtgccaaggacctagaggagttc
ttctccgctgtgggcaaggtgcgtgacgtgcgcctcatctcggaccgcaactcgcgccgc
tccaagggcatcgcgtacatcgaatttgtggatcttgactcggtgccactggccatcggg
ctcacgggacagaggctgctgggtgtgcccatcatcgtgcaggcatcgcaggctgaaaag
aatcgtgccgcagctgctgctgctgccaaccttcagaaactggcatcggggcccatgcgc
ctgtacgtgggctcccttcacttcaatatcaccgaggccatgctcatgggcatcttcgag
ccattcgggaagattgataacatccaactgatgatggaccccgagactggcaggtccaag
ggctttggattcataacgtttgcaagcgccgactgcgccaagaaggcgctggagcagctg
aatggctttgagctagccgggcgacccatgaaggtgaactacgtgtcggaccactcggat
gtcatcatcagcgttggcagcggcggaggtggttcgtccttcctggacaacgacgagctc
gagaggacgggcatcgatctcaccaacacgggccgcctgcagctcatggccaagctggct
gagggttctgggctcactataccacccgtagcgcagcaggctctgcagatgaatggagcc
attcccctggaggcattaatgccctccctagctgcatccatgaacccaaccttcaccatg
tctccaaccatcgccactcagtgcttccaactctccaacatgttcaatccacagtcggag
gtgaattccagctgggtgcaagagatccgggacgacgttgtggaggagtgcaacaagcac
gggggcgtggtgcacatctacgtcgaccagaattcagccgagggccatgtgtatgtgaaa
tgtcccaacatacccgtcgcacttgctgctgtcaactctcttcacggtcgctggtttgca
ggtaagatgatcacggcagcatacgtccctgtgcccacctatcacaacctcttcccagac
tccatgaacgcattgcagctactcacgcccatgaggagatga
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