Lethenteron reissneri (Far Eastern brook lamprey): 133350853
Help
Entry
133350853 CDS
T09663
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lrj03037
]
133350853 (RTTN)
Cilium and associated proteins [BR:
lrj03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
133350853 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
DUF383
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
133350853
NCBI-ProteinID:
XP_061421634
LinkDB
All DBs
Position
35:6267933..6335805
Genome browser
AA seq
2320 aa
AA seq
DB search
MDVPSLVNKLGHHLEEIRVRALKNLLLKLEHGLLAEADLVQEKRLLVRLLEWFNFPSVPM
QKEVLGLLHKLSQHSSAAGLLVEIGALEFLAQLRPNVQASLQAPVDSIMDCLLRLPTVQP
ETPSVMYSANSPPEDTHQQGSLALKPMQADGNTGYFIHSKKEKDIPKNNIILPVNDVVKC
LKFSTFPWLCLTPNDKHVLTSTERSLRSKNASLIRSSCDFLLDVMMCDFPAETFLQRPNI
VENLLLLLRLAGGADGTHHLALHALRCLHHLCRNLTSRLCFHRDPAFFSTKPDVDYQNSS
VSSSGTSVESDERSATAAATSPRPSTQGHRDQRPRGDGRDGDLSSSASSTGSSESRNETS
SRATPSPLELGTTGGELDADFTLELQLQQWGLPNFCLMAMQPAIDMLKTGSSRDVLGVLE
LLASLSSLLSESLTSDVWQDNSLIGRDLAERMSGILESLAEVVSYHYTSRVAEGQPEPQR
AHHRLAFNGCALAFLRLVQMLVPLEQAGTILPGSVVSALSMISLDVPFCRTFPTACDAAW
SFLEQASSECHSLSTRVASVTQSMECTCTFLREFTNQDDGNMLELIELADQAVESIPYHL
HLPFIQHFITLCSKIHKTLQPSPTAAGESRKVLLKLLSHPVNVIRANVYSNCLNIVQESL
GIHNVTKSVSTACLGVRFLLHSRVLYELCAFGLQDSHKEVCLAARAIVLYLLQSRLLMCA
ATWGQLLEALTPVLPVLQGFAGEEGALGSAIVNLSETESQSGEGPIPRTDRLRASLRLLL
AKQLPVRSAGVQQLAWHLVSEEQAGHKRPHLPGTVLAGEPNLLIPDVPLRPDTETIGKSV
FKEDAVCKVYGIFMSEAVDLAVKKSAAEQLTIMMQDTILHGVLKKQGAVEKVISLLHQAV
HKDGRGLECMVRPCLTLLRRLVYHDPCLRHRLAYQPTLLLSLLRVLLVYQSEAVVQLEVS
VLLSLLLFDEVAQIEKWSDSYPLDGCDPQPLSLPLVVEQRFHLPLVMATHHVVSPHRVIP
PPPSDPLVAPPARDAIRLGWNLAWHQGVEALLQAHAASQLEATNQGFPELLRMNGSDVMG
LRLTHMPCSLQLCLEAVSRAASHGEAKLALLRLRLQLLNDALLPQPGAESKAAQMLLSMD
WRSTLKRFLVVRPVSNADEKLLGEVLAFLQALLHAQGDIPDHSMLQWILLLLKEESNHLL
DLLNKSNTQVDARHTVTESPTRKGLLKELSSLFNALVRALGCSPDKQSLAASNGVRCHLA
ALLLGRLKEADSSGFYELPSLEATLRGMAHATALPGWSVASTATQPNNLRLQYLASLQEI
VLSFSIGREGNGLSFLGKGVTKSAVVCLRQLASEMSDQAENQDWVSPWSWSRKGSGRGET
AAQLGLTWLISLWVDRDLEVRLASLGLGTALTSEEQGCMALVAACQNISGGLWGTALKIL
LDQYESSMVRLEAASILQNLLVLPMPASADEAGDGCWQGPCVHDEDTDLSLVGLPALLAL
LYHCRFYQHFAGMIANCCREARLVYASPPQDGKSSHGESSSASAELSDALGHPGGSPAAS
NPHPGPSCPSTSSTWDHLIPGNGVDGTRTGRYPANRLSAQGQSESEGQESVNSEGTQDAQ
WERRGVHADSSVVTPHLVSGMCRLVRNVLALAPEMTAHSLLQHQILSSLNRCADAGVLGA
SLCEIRNPTQTLHLARESKALVLSLLDLQAAVCELVEACAILSLGTVLEGSLLGDLLQNL
LAVFSQTKSKILDVEVQQAVHRVWEKSLSLQCVLLRKAGPTMLPPFVSAACHHWGALVGC
LKTCLKMSSSNRSLHIATMQFLAMLLVEESKRKLSLKSPENDGDEDDGVAPEAEDAHPHK
LCLQKADGSTNGKPISLDTGGVSRKTRSVRAERSRESRTRVGEGERRVRSSASMGAASGD
PATLMWLLDRDGSWEAPLAGSQLCKIILQCFECRSTDDLLGVHATSALCCLLAVSASAKN
YARQAGLIEGCVEQAKQAHSKLELDSLEQAKPAPRKKEDRLLRELRTLLEVLRNCLYESE
DCKVAASDERLAAVLLALWPYLLADDSTLLAALRLLCVFTTSCRAACLSCCIGGTGTCAT
AGGGSSLVHAVIRLCSVRAGDSSAVERHAFTLLSNLLLSHEGKGVLQKSNFLQQFASLHP
PKLSRASSPLVLHWLGLLVNLTTSEDGQQMVLRLGGSLELLLEMAGHQQAACHRAATLVL
HNLCFSTANKAIILANEKAVAFLARCLENETLEMRSLGSSALWALLYNSQKAKVSLKNPS
IKRKVDDALKAHRKGVRAEDFKLYTYCLKSLENVSTLLNT
NT seq
6963 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgccgtcgctcgtaaacaaactgggccaccatctggaggagatacgtgtgcgg
gcgctcaagaatctactgctcaagctggagcatggcttgctggctgaggcggacctggtg
caggaaaagcgcttgcttgtccgcttgcttgagtggttcaacttcccttctgtgcccatg
cagaaagaagtgctggggttgctgcacaagctttcccagcattcttctgcagcggggtta
ctggtcgaaattggagcacttgagttcctggcgcagctgcggcctaacgtgcaggcgtca
ctgcaggcacctgtggacagcatcatggactgcctactgcgcctcccaacagtgcagccc
gagaccccctctgtgatgtactctgccaattccccaccagaggacactcaccagcaaggt
tctcttgctttgaaaccaatgcaggcagatggaaacacgggctattttatacacagcaag
aaggaaaaggacattccaaaaaacaacataatcttgccagtaaacgacgttgtgaagtgt
ttaaagttttctacatttccatggctctgcctaactccaaatgataagcatgttctgact
tcaacggaaaggtccttacggagtaagaatgccagcctgattagaagttcctgcgacttt
ttattggatgtgatgatgtgtgattttcctgctgaaacattcttacaacggccaaatata
gtagagaacctgttgctgctattgaggctggccggaggagcagatgggacccaccatctg
gccttgcatgcgttacggtgcctccaccacctgtgccgaaacctcaccagccgactttgc
tttcacagggaccctgcgttcttttccaccaagccagatgtggactatcagaactcctca
gtatccagttcaggcacctcagtggaatcagatgagcgatcagctaccgctgctgccacc
agccctcgcccgtctactcagggtcacagggaccagcggccacgtggggacggcagggac
ggtgacctttcttcctctgcctccagcaccggttcatctgaaagccgcaatgagacctca
agtcgtgccacaccatccccactggaactgggcacgacgggaggtgaactggatgcagac
ttcactctggagttgcagctacagcagtgggggctacccaacttctgtctgatggcaatg
caaccagccattgatatgcttaaaacagggagcagccgtgatgtcctcggtgtgctggag
ctgcttgcgtcgctgagctcgctgttgtccgagtctctaacgtcggatgtttggcaggac
aacagcttgatcggtcgggacctggctgagcggatgtcgggcatcctagaaagcctggcg
gaggtggtgtcttaccactacacaagccgtgttgctgaagggcagcctgagccgcagcgt
gcacaccatcgcctcgccttcaacggctgtgccctagcatttctacggctggtgcaaatg
ctggtgcctctagagcaggcagggaccattctacctgggagtgtggtgtcagcactgagc
atgatttcgctggacgtcccattctgtcgcactttcccgaccgcctgcgatgcggcttgg
tccttcctggagcaggcgagctccgagtgtcactcgctgagcacacgcgttgcctccgtt
acccagtcgatggagtgcacctgcacttttctgcgagaattcaccaaccaggacgatgga
aatatgttggagctgatagaacttgctgaccaagctgtggaaagtataccgtaccacctg
caccttcccttcattcaacacttcataaccctgtgttccaaaatacacaagacattgcaa
cctagcccaactgcagctggtgaaagcagaaaagtcttgctaaagctcttgtcacaccca
gtgaatgtgattcgagctaatgtctacagcaactgtcttaatatagtccaggaatcatta
ggcattcacaatgtgacaaagtcagtgtccacagcctgcctcggagtacgcttcttgctg
cacagtcgggtgctgtacgaattgtgtgcctttggcctccaggattcccacaaagaggtt
tgcttggcagcccgggccattgtgctgtacctgctgcagagccggctgctcatgtgcgct
gctacctggggacagcttttggaggccctcactcctgtactgcctgttctgcagggtttt
gcaggagaggagggagctctaggctctgcgatcgtaaacctaagtgagacggagagccag
agtggtgagggtcccatcccgcggaccgatcgtctccgtgcctccctccgtctgctcctg
gccaagcagcttcctgttcgctcggctggagtgcagcagctcgcgtggcacctggtgtcc
gaggagcaggcaggacataagcggccccacttgcccggcaccgtgctggctggggagccc
aacctgctcatcccagacgtgccgctgcgtccggacaccgagaccatcggcaaatcggtg
ttcaaggaggacgcagtgtgcaaggtctatgggatttttatgtctgaggcggtggacctc
gctgtaaagaagtctgcagctgaacagcttaccattatgatgcaagacacaattctgcac
ggtgtattaaaaaagcaaggcgcagtggagaaggtgatttcactgctgcatcaagctgtg
cataaagatggaagggggctggaatgcatggtgaggccatgcttgacgttgctgaggcgt
ctcgtgtaccacgatccgtgtttgcgacatcgcttggcttaccagcccactctgctgctg
tctttgctccgagtgttgctggtttatcagtcagaagccgtggtgcagttggaggtttct
gttctgctgtctctcctgctgtttgatgaagtggcccaaatagagaaatggtctgattca
tatccattggatggctgtgatcctcagccattgagtctgcctcttgttgtagaacaacga
tttcatcttccgcttgtaatggcgacgcaccacgtggtgagcccgcacagagtgattcct
ccgccgccgtccgatcccttggttgctccgccagccagagatgccatcagacttggctgg
aacctcgcatggcaccagggtgtagaggctctgctgcaggcacatgctgcgtcacagctg
gaagcaacaaaccaagggtttcctgaactgctgcgaatgaacgggagcgatgtgatgggg
ctgcgcttaacgcacatgccctgcagcctgcagctgtgcctggaggcggtgagccgagcg
gcctctcacggcgaggcaaagctggccctgctgcgtctccgcctgcagctgctcaatgat
gctctgcttccccagccgggagcagagagcaaggctgcacagatgctcctcagcatggac
tggcgctccacattgaaacgcttcctggtggttcgtccagtgagcaatgcagatgagaag
ttgctgggggaagtgcttgccttcctgcaggccctgttacatgctcaaggagacattcca
gaccatagcatgctgcagtggatactgctgctcctcaaagaggaatcaaatcatcttctt
gatctgctcaacaagtcaaatacccaggttgatgcacgtcacactgtgactgaatctccc
actcgaaagggattattgaaagagctctcatcattatttaatgccttggtgcgagcactg
ggctgcagtccagacaaacaaagcttggcagcatcgaacggtgtccgttgccaccttgct
gctttgctgctgggtcggctgaaagaagcggatagctccggattctacgagctgccatct
ctggaagccacactgcgcggcatggctcatgccacggctctgccaggatggagcgtcgct
tctacggccacgcagccaaacaacctccgcctgcagtatctcgcctccctccaagagatt
gtgttgtcattcagcattgggcgagaaggaaatggcctttcattccttggcaaaggggtc
accaaaagtgccgtggtgtgcctgcgacagctggctagcgagatgagcgatcaggctgaa
aaccaagattgggtgagcccttggtcttggtctcggaagggtagtggccgcggtgaaaca
gctgcgcagctagggctgacctggctcatctctttatgggtggacagagatctggaggtg
cgtttggccagcctaggcctcgggacggcactgacttctgaggagcaaggctgcatggcc
ctagttgccgcatgccaaaacatctcaggaggcctttggggcacagcactgaagattctg
cttgaccagtacgagtccagcatggtccgcttggaggctgccagcatcctgcagaacctg
ctagttctgccaatgccagcgtcagcggatgaagcgggggatggctgctggcagggccca
tgcgtgcacgatgaggacacagacctctcgcttgtggggctgccagctctgctggccctt
ctctaccactgccgcttttaccaacactttgccggcatgatcgcaaactgttgccgagag
gcgcgtctggtgtacgccagcccaccacaggacggcaagtcgtcacacggagaaagcagt
tcggcctctgccgagctgagtgatgccctcggacacccgggcggtagcccagcagcatcc
aacccccacccagggcccagctgcccatccacctcctccacgtgggatcatttgattcct
ggaaatggagtcgacggcactcgcaccggcagatatcccgccaacagactttccgcgcaa
gggcaaagtgaaagtgaggggcaggagtctgtgaacagtgaaggcactcaagacgcccag
tgggaacggcgtggcgtgcatgctgacagtagtgtagtgaccccccacctcgtctctggc
atgtgccgacttgtccgcaacgtgcttgcccttgctcccgaaatgacagcccactcactc
ctccagcaccagatcctgtccagcctcaacagatgtgcagatgcaggcgtgctgggtgcc
tctctctgcgagatcaggaaccccacacagactctgcaccttgccagggagtccaaggct
ctggtgctgtcactgctggatctgcaggcggctgtgtgcgagctggtggaggcttgtgcc
attctctctctcggcacagtgctggagggaagtctgctgggagatcttttgcagaacctc
cttgccgtcttttcccaaaccaagtccaagatcttggatgtggaggtacagcaggcagtg
cacagagtatgggagaagtcgcttagtctgcagtgtgtgctgctaaggaaggctggaccc
accatgctgcccccgtttgtctctgctgcatgccatcactggggtgctcttgtcggatgc
ttgaagacgtgcctcaaaatgtcttcatccaaccgctctctgcatatagccaccatgcaa
ttcctggccatgctgttggtagaagaaagcaaaagaaagctgagtttgaaatcaccagaa
aatgatggcgatgaggatgatggagtagcacctgaagcagaggacgcccaccctcacaaa
ctctgccttcagaaagcggacgggtcaacgaatggcaaaccgatttctcttgataccggt
ggcgtaagtcggaagacaagatcggtacgagcagagcggtcaagagaatctcgtactcgt
gttggagaaggcgagcggagagttcggtcatcggcgagcatgggagcagcgtctggtgat
ccagccacgctgatgtggctgctcgatagagatggctcgtgggaagcgccactcgccggg
agccagctctgcaagatcatcttgcagtgctttgagtgcaggtctactgatgatctactt
ggagtgcatgccacgtctgctctctgttgtctcctcgctgtcagcgcatcagccaagaat
tatgcccgtcaagcgggcctgattgagggctgtgtggagcaagccaagcaagctcacagc
aagctcgagttggactcactggagcaagcaaaaccagccccgaggaagaaggaggaccga
ctgctgagagaattgaggactcttctggaagttttgaggaactgtctctatgagagcgag
gattgcaaggttgcggcgtcggatgagcgtctggccgccgtgctcctggccctctggccc
tacctcctcgcagacgactccactctgttggctgccctccgcctcctctgcgtctttaca
accagctgtcgcgcagcgtgtctgtcctgctgcattggaggcactggcacctgtgctacc
gcagggggtggctcctccttggtgcatgcggtgattcgcttgtgctcggtgcgtgcggga
gactcctctgccgtcgagcgtcacgccttcacgttgctgtccaacctcctgctctcgcac
gagggcaagggggtcctgcaaaagagcaacttcctgcagcagtttgcgagtttgcaccct
cctaagctgagccgagcttccagcccactcgtgctgcactggctgggcctactggtcaat
ctcaccacatcggaggatgggcagcagatggtgctgcgcctgggcggtagcctggagctg
ctgctggagatggcagggcaccagcaggccgcctgccaccgtgccgccactctcgttctg
cacaacctgtgcttcagcacagccaacaaggccatcatcctggccaacgaaaaagctgtc
gccttcctggccagatgtctggagaatgagaccctcgagatgaggtcccttgggtccagc
gcgctgtgggcactgctctacaactcacagaaggctaaagtaagcttgaaaaatccatcg
atcaagagaaaagttgatgatgcattaaaggcacatcgaaaaggtgtgagagcagaggat
ttcaagctgtacacatattgcctcaagagcctggagaatgtgtctaccttactgaacacc
tag
DBGET
integrated database retrieval system
