Lethenteron reissneri (Far Eastern brook lamprey): 133350977
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Entry
133350977 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133350977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133350977
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133350977
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
133350977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
133350977
NCBI-ProteinID:
XP_061421826
LinkDB
All DBs
Position
35:13405900..13428178
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AA seq
1011 aa
AA seq
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MEALTDDGDICRVCRSEGTAEKPLYHPCVCTGSIKYIHQDCLLQWLKHSKKEYCELCKHR
FAFTPIYSPDMPSRLPLRDILAGLFRSVCTGVRFWLHYTLVAFAWLGVVPLTACRIYKCL
FTGSVSSLLTLPLDLLSTDNLLADCFQGCFVVTCTLCAFISLVWLREQILHGGAPPWLEQ
NQQARNANPDANPNANLDVNPNANDNGPGQPAPHDAQAEEVVDLGAPPARDGAEDGEPAG
GGAAEGAGPQDGVVPPVVAEPAGDGAPGPRDVEEGPQEEEEEEVEGELEEEVEVGDGEEE
ENVEDEAAADGVDGAAQGGNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTL
FILVFAFCPYHVGHFSVVAMGVKEHVMCPCVRGLCHQVAASHFEGLITTIVGYVLLALAL
VLFHALASLVRFQRSKRILGLGYVVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLK
DREASFQSAPGTTMFLHWLVGMVYVFYFAAFILLLREVLRPGLLWFLRNLNDPDFNPVQE
MIHLPIYRHVRRFILSVIVFGSIVLLMLWMPIHIIKSLLPTFLPYNVMLYSDAPVSELSL
ELLLLQVVLPALLEQGHTRQWLKGLVRAWTLAAGRLLDLRSYLLGDEAEGDTATEPHAGA
DHQPGPNNNNNAAELEEGVAAAPPMPAPAAAPAAAPALGGLNMAHQAMLQQGGPVGFQPY
HRPSHFASRVMMLLALLCFTLMVASLVCLIVPVLAGRWLMSFWTGETRIHELYTAACGLY
VCWVAARAITISAAWLPQGRTVLLQKVKEWSLLLIKSVVVAVLMAGVVPLLLGILFDLVV
VAPLRVPLDQTPIFFPWQNWALGVLHAKIITAITLMGPQWWLKSIIEQIYANGLRNMNLW
FIIRELAAPVVTVLLLYLCIPYVIAAGAVPLLGAAPEMQTLVRRRIYPLVLMVVMLLGFV
SFQAQQFRRLYEHIKNDKYLVGQQLVNYEQKSAAARSAQAAASAVPPPPPL
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggaggccctcacagacgacggcgacatctgccgggtgtgccggtccgaaggcaccgcc
gagaagccgctctaccacccgtgcgtgtgcacgggcagcatcaagtacatccatcaggac
tgtttgctacaatggctgaagcacagcaagaaggaatattgcgagctgtgcaagcacaga
tttgcgtttacaccaatctactcgcccgacatgccgtctcggctgccgctgcgcgacatc
ctggcggggctgttccgcagcgtgtgcacgggcgttcgcttctggctgcactacactctc
gtggccttcgcctggctcggggtcgtgcccctcaccgcctgccgcatttacaagtgtctc
tttactggctccgtgagctccctgctgaccttgcccctggaccttctttctacggacaat
ctcctggccgactgcttccagggctgcttcgtggtgacgtgcacgctgtgcgccttcatc
agcctcgtgtggctgcgcgagcagatcctgcacgggggggcgccgccctggctggagcag
aaccagcaggcgcgcaacgccaaccctgacgccaaccctaacgccaacctcgacgtcaat
cccaacgcgaacgacaacggccccgggcagccagcgccgcatgacgcgcaggctgaagag
gtcgtcgatctgggggcaccaccggccagagatggagccgaggatggagagccggcgggc
ggaggagcggcggagggcgcaggtccccaggacggggtcgtgcctcccgttgtggctgag
cccgcgggggatggcgcaccagggccgcgggacgtcgaggagggcccgcaggaggaggag
gaagaggaggtggagggggagctggaggaggaggtggaggtgggggatggggaggaagaa
gagaacgtagaagatgaagctgcagctgacggtgttgatggtgctgcccaaggagggaac
tggaacgcgctggagtgggaccgagcggcagaggagctcacgtgggagcggatgctcggc
cttgatggatccctcgtgtttctggaacacgtcttctgggtcgtgtcgttgaacaccctc
ttcattttggtgtttgcgttttgcccctaccacgtgggccacttctctgtggtggccatg
ggagtcaaggagcatgtgatgtgcccgtgtgttcgtggtctctgccaccaggtggcagct
tcgcatttcgagggcctcatcaccactatcgtgggctacgtgctgctcgcccttgcgctc
gtgctcttccacgccctggcgtcgctggtgaggttccagcgttccaagcggatccttggt
ctcggctacgttgtggtcaaggtgtctctgctggtcgtggtggagatcggggtgttccca
ctcatctgcggctggtggctggacatttgttcactggagatgtttgacgcgacgctgaag
gatcgagaggcgagcttccagtcggcgccgggcaccaccatgttcctgcactggctggtc
ggcatggtctacgtcttctacttcgccgccttcatcctgctgctgcgcgaggttttgcga
ccgggacttctgtggtttctccgaaacctcaacgatccagacttcaaccccgtacaggag
atgatccacctgccgatttaccgacacgttcgcaggttcatcctctccgtgattgtgttt
ggctccatcgtgctgctcatgctgtggatgcccatccacataataaagtctctcctgcca
acgttccttccctacaacgtcatgctctacagcgacgcccctgtgagtgagctatcgctg
gagctgttgctgctgcaggtggtactgccggcgctgctggagcagggccacacacgccag
tggctcaagggcctggtgcgcgcgtggacactcgccgccggccgactcctggacctgcgc
tcctatttgcttggggacgaggctgaaggagacaccgctacggagccgcacgccggtgcc
gatcaccagccggggcccaacaacaacaacaacgccgccgagctggaggagggggtggcg
gcagcgccgcccatgccggcgcccgcggcggcgccggcggcggcgccagccctgggaggt
ctcaacatggcacatcaggccatgctgcagcaaggaggccccgtgggcttccaaccgtac
caccggcccagccactttgcgtcccgggtgatgatgctcttggctcttctgtgtttcacg
ctaatggtggcaagtcttgtctgccttattgtaccagtgctggcaggacgttggctcatg
tcgttctggacgggcgagacgcgcatccacgaactctacacggccgcgtgcggcctctac
gtgtgctgggtggcagcgcgggccatcaccatctcggccgcgtggctgccccagggccgc
acggtgctgctgcagaaagtgaaggagtggagtttgctgctcatcaagtccgtggtggtg
gctgtgctgatggcgggcgttgtgcccctgctgcttggcatcctgtttgacctggtggtg
gtggcgcctctccgggtgccactggaccagacgccaattttctttccctggcagaactgg
gcactcggagtcctgcacgccaagatcatcacggccatcaccctcatgggcccgcagtgg
tggctcaagagcatcatcgagcagatctacgcgaacgggctgcgcaacatgaacctgtgg
ttcatcatccgcgagctggcggcgcctgtggtcaccgtgctgctgctctacctgtgcatc
ccctacgtcatcgccgctggcgccgtgccgctgctgggggccgcgccggagatgcagacg
ctggtccggcgcaggatttacccgctggtgctcatggtggtgatgttgctcggatttgtc
tcctttcaagctcagcaattccgccgcctctacgagcacatcaagaatgacaagtacctg
gtggggcagcagcttgtcaactacgagcagaaatccgcggcagccaggagcgcgcaggct
gctgccagcgctgttccaccgccgccgccgctgtga
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