Lethenteron reissneri (Far Eastern brook lamprey): 133351154
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Entry
133351154 CDS
T09663
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133351154 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133351154 (LIG3)
Enzymes [BR:
lrj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
133351154 (LIG3)
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
133351154 (LIG3)
BRITE hierarchy
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
133351154
NCBI-ProteinID:
XP_061422132
LinkDB
All DBs
Position
36:complement(11971428..11992320)
Genome browser
AA seq
1012 aa
AA seq
DB search
MPLASFWTTTVSPLLLLLGRWAVGQARCTALPPPLPRTGSQRLTWPLKSTRSVFLLQRGP
VSFLLRRDPPLLASAIAAMTEQRYCVDYARLGTAGCKKCKEKIAKGLVRIGKIVANPFGD
GGGEMKEWHHVRCIFERLERSRPSTRRIEELSDLEGYERLLDPERELINGCIEDLLMKRG
ASPRKPAGQTKPALASPFRMEVSSGPSMTGPRKFSGFSATPTTTITAAAAAAAAPSRPSG
TAAYDPSHKDCLFREFRKLCAMIAEQPSYNSKTQIVHDFLRKGTSGDGFRGDVYLTVKLL
LPGVVKSVYNIKDKQIVKLFSSVFNCSLDDMVRDLEKGDVSETIRVFFEASSNFTPTAKS
TLTIQEVEGFLGRLALLTKEEEQQGELQDIARRCTSNDLKCIIRLIKHDLKMNAGAKHIL
DGLDPNAYDAFKASRNLEDVVDRVLQNWQDGSRKALSVTASLMTPVQPMLAEACKSVAYA
MKKCPNGMYAEIKYDGERVQVHKNGDSFQYFSRSLKPVLPHKVAHFRDFIPKAFPGGTSM
ILDAEVLLIDTTTSKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNGESLMDRSIKDRRK
FLHDNMIEIPNHILFSEMKHVTRASDLAEMISRVIKEGLEGLVLKDVLGIYEPGKRHWLK
VKKDYLNQGAMADTADLAVLGAYYGHGSNGGIMSIFLMGCYDENLGRWCTVTKCSSGYDD
ATLNRLQKELEMVKISKSASKIPDWLKINKTYFPDFIIRDPKKAPVWEITGAEFSKAEAH
TADGISIRFPRCTRMRDDKDWRTATTLQQLKELFKKSKENSDVMDLLGSSVKNDSESAPA
TPGGSTNGSGSSSPKQGPSTTTTSSSSSKAKASQKASRGASASRKPKQPSRADTKPVLAP
AVIPPVMPPAPVKRKRTTEAQEETLLNIFTGVRLHLPASAEGSDRARRYFFAYDGDLVPD
HDMDSATHAVAAAAAAPADSGEPPAALPPKAQRVSVDWIWQCVKRRRLVPPC
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgccccttgcttctttctggacaacgacggtgtcgccgctgctgctgcttctgggccgg
tgggctgtcggccaggcgcggtgcaccgcactacctcctcccctgccacgcacgggcagc
cagcgtctgacgtggccccttaaatccacgcgctccgtcttcctccttcaaaggggcccc
gtctccttcctcctccgccgagaccctcccctccttgccagcgccattgcagccatgacg
gagcagcgctactgtgtggactacgccaggctgggcacggcgggctgcaagaagtgcaag
gagaagatcgccaagggcttggtgcgcatcggcaagatcgtggccaatccgtttggcgac
ggcggcggcgagatgaaggagtggcaccacgtgcgctgcattttcgagagactggagcgt
tctaggccctccacccgccgcatcgaggagctgagcgacctggaaggctacgagcggctc
ttggaccccgagcgggaactcatcaatggctgcatcgaagacctcctcatgaagagggga
gcgtcaccacgtaagccggcaggccagaccaagccagcattggcctctccttttaggatg
gaggtgtccagtgggccatcaatgacaggcccacgcaagttctccgggttctcagccact
cccacgacaacaataacggcggcggcggcggcagcggcggcgccctcccggcccagcggc
accgcggcatatgacccgagccacaaggactgcttgtttcgcgaattccgcaagctgtgc
gccatgatcgccgagcagcccagctacaacagcaagacgcagattgtccacgacttcctg
cgcaagggcacgtccggagatggtttcagaggcgacgtgtacttgacggtgaagctgctc
ctaccgggcgttgtcaagtccgtctacaacatcaaggacaagcaaattgtgaagctcttc
agcagcgtgttcaactgcagcctggatgatatggtgcgcgacctggaaaagggcgacgtg
tcggagacgatccgcgtcttcttcgaagcgagcagcaacttcacccccaccgccaagagc
acgctgaccatccaggaggtggagggcttcctggggagactcgccctgctcaccaaggag
gaggagcagcagggcgaactgcaggacatagcgcgccgatgcacctccaatgacctcaag
tgcattatccgactcatcaagcacgacctcaaaatgaatgccggcgcaaagcacatactg
gatgggctggacccgaacgcgtacgatgcgttcaaggcgtctcggaacctggaggacgtc
gtcgaccgtgtcctgcagaactggcaggatgggtcgcggaaagcactttccgtcacggcc
tccctcatgacgcccgtgcagcccatgctggcggaggcgtgcaagtctgtggcgtatgcc
atgaagaagtgtcccaacggcatgtacgctgagatcaaatacgatggggagcgcgtgcag
gtgcacaagaacggagactccttccagtacttcagccgcagcctcaagcccgtgctgccc
cacaaggtggcgcacttcagagactttatccccaaggcattcccggggggcaccagcatg
atcctggatgcggaggtgctgctcatcgacacgaccacaagcaaaccgctgcccttcggc
acgctcggggtgcacaagaaagctgcatttcaggacgctaacgtgtgtctgtttgtgttc
gactgcatttacttcaacggggaaagcctcatggacaggagcatcaaagatcggagaaaa
ttcctccacgacaacatgatcgaaatccccaaccacatcttgttttcggagatgaagcac
gtgacgagagcctcggacctggctgaaatgatctcccgggtcattaaggagggtctggaa
gggctggtattgaaggacgtcttgggaatctacgagccgggcaagcggcactggctcaag
gtgaagaaggactacctcaaccagggcgccatggcggacacggcagacctggctgtgctg
ggcgcgtactatggccacggcagtaatggtgggattatgtccattttcctcatgggctgc
tacgacgagaacttggggcgctggtgcacagtgacgaagtgctccagtgggtacgatgac
gccaccctcaatcggctgcagaaggagctcgaaatggtcaagatcagcaagagtgcatca
aaaatccccgactggctgaaaatcaacaagacatacttccccgacttcatcatccgcgac
ccaaagaaagcgccggtgtgggagatcacgggtgcagagttctccaaggccgaggcgcac
acggccgacggaatctccatccgcttcccgcgctgcacgcgtatgagggacgacaaggac
tggcgcaccgccacgaccctgcagcagctcaaggagctcttcaagaagtctaaggagaac
tcggacgtgatggacttgctcggatcatccgtgaagaatgactccgagtcggcgccggcc
acgccggggggcagcaccaacggctcgggctcctcctctcccaagcagggcccctccacc
accaccaccagcagcagcagcagcaaggccaaagcctcgcagaaagcctcacgcggtgcc
tctgccagccggaagcccaagcagccgagtcgtgccgacacgaaaccggtgttggcaccg
gctgtaattccgcccgtgatgccacctgcgccggtgaagaggaagaggaccaccgaggct
caggaagagacgctgctcaacatcttcacgggcgtgcgcctgcacctgccggcgtccgcg
gagggctccgaccgcgcgcggcgctacttcttcgcctacgatggcgacctggtgcccgac
cacgacatggactcggccactcatgcggtggcggcggcggcggcggcaccggcggacagc
ggggagccccccgcggcactcccgcccaaggcccagcgcgtttccgtcgactggatctgg
cagtgcgtcaagcggcggcgcctcgtgccgccgtgctga
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integrated database retrieval system
