Lethenteron reissneri (Far Eastern brook lamprey): 133351155
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Entry
133351155 CDS
T09663
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrj03009
]
133351155
Enzymes [BR:
lrj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
133351155
Ribosome biogenesis [BR:
lrj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133351155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
133351155
NCBI-ProteinID:
XP_061422134
LinkDB
All DBs
Position
36:complement(12011401..12032183)
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AA seq
942 aa
AA seq
DB search
MRASAEPSSAAWRFIITFHRPPHFTPWPSSRDIGTRSQQRQHPHCTADESPLSSQPNRHL
CNDPARSDLIAPSPRSYGGVVRFSTTTAAHSRETCRSLERRRGDDSSREDHLDCDFLPLG
VVEEHMGRRRSRTIISSGAMGRRLDPSKRVLKGPGRKSKKQRGAETEVAWALRKDPGVEV
KLSSHGRKRAAKRFAKEVQKVENKSGFSKPKKQLLSVGVTQDDEDDDSTGDGAAGSDEEL
SGADSADDAILEVKRTKVYSDENAAWLTPAKRKRLDDDDDDDDDDDEESDLENGGEGLCA
DFDGSDDDDDDDEDDEGEGDEDGDDELLPIEKAAKKQRSRMEKAKKLLQEDEDDLQTNIV
ESERFVLPSGQEIEKEAVQPPDLQIIHQRMQDNLAVLGDFTNRREPGRTREEYLELLKRD
LAMYYSYNDFLMSLLSGLFPLSELIEFLEANEVHRPVTIRTNTLKTRRRELAQALINRGV
NLDPLGKWSKVGLVIFDSSVPVGATPEYLAGHYMLQGASSLLPVMALAPQENEKLLDMCA
APGGKTSYAAQLMRNTGAIVANDVNSERLKSVVGNLHRLGVTNSIVCNYDGRTLAKVMTG
FDRVLLDAPCSGTGIISKDPSVKTSKDEKDILRCAHLQKQLLLTAIDCLDAASTTGGFLV
YCTCSVTVEENEWVVDYALRKRNVKLVPTGLDFGKEGFTRFKERRFHPSLKLTRRFYPHT
HNMDGFFVSKFKKISNDIPKSATDARDVELFMDEQDDDEVGSGPDSAGASKKAAATAAAA
AKNGIHSAKTNHMNKRRRLNGGTDNRPGPKQAPKQQQQSGPGRGHKGQTARQQGGQPKGQ
SAQRPPASKLAGHIGNANNKGKAVGKTTLKVAGSATRIPQVGKAAFRVTGKATGKPGGVK
AGGKFGGKKSATPTRKAGASPGPGKFPSPKQFRNKKGKPAKV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgagcgccgagcccagctccgccgcgtggcgcttcatcatcaccttccaccgc
ccgccgcacttcaccccgtggcccagcagcagggatatcggcacaaggagtcaacaaaga
caacacccgcactgcactgctgatgaaagcccgctctcctctcagcccaatcgccatctc
tgcaacgatccagcccgctccgatctcatcgctccgtctccacggtcgtacggcggagtt
gttcgcttctccacgaccaccgccgctcactccagagaaacctgccgctcgttggagaga
cgccgcggagatgattcgagccgagaggaccacctcgactgcgatttcctccctctcggg
gtcgtggaagagcacatggggaggaggcggtctcgaaccatcatttcttccggagccatg
ggcagacgtctcgaccccagcaagagggtcctcaagggccccgggagaaagagcaagaag
cagcgcggagcggagaccgaggtggcttgggccctgcgcaaggacccgggtgtggaggtg
aagctctcaagtcacgggcggaagagagctgcaaagcgttttgccaaggaggtccagaag
gttgaaaacaaatctggattttccaaacccaagaagcagctgctgagtgttggagtgacc
caagatgacgaggacgacgactccacgggcgatggcgcggctggctccgacgaggagttg
tcgggggccgactcggcagacgacgccatcctggaggtgaagaggaccaaggtatacagc
gacgagaacgccgcgtggctcacgcccgccaagcgcaagcggctcgatgacgacgatgat
gatgacgacgatgatgacgaggagtccgacctggagaatgggggcgaggggctgtgcgct
gattttgatggctccgatgatgacgacgatgatgatgaagacgatgagggggaaggtgac
gaggatggtgatgatgagctcctgccaatcgagaaggctgcgaagaagcagagaagtcga
atggagaaggccaagaagctcctgcaggaggatgaggacgacctgcagaccaacatcgtg
gagagcgagcgctttgtgctgcccagcggacaggagatcgagaaggaagccgttcagccg
cccgacctgcagatcatccaccagcggatgcaggacaacctggcggtgctgggagacttc
acaaaccggcgcgaaccgggcaggacccgggaggaatacctggagctcctgaagcgtgac
ctcgccatgtactacagctacaacgacttcctcatgagcctcctcagcggactcttcccc
ctctccgagctcatcgagttcctggaggcgaacgaggtgcaccggcccgtgacgatccga
acaaacacgctgaagacgcggcgcagagagttggctcaggctctcattaaccggggcgtg
aacctcgaccccctgggaaagtggtcaaaggtcggcctcgtcatcttcgactcgtcggtg
cccgtcggcgccaccccggagtacctcgccgggcactacatgctccagggcgcctccagc
ctgctgcccgtcatggcgctcgcgccgcaggagaacgagaagctgttggacatgtgcgcc
gcgcccggcgggaagacctcgtacgcggcccagctgatgaggaacacgggggcgatcgtg
gccaacgacgtgaactcggagcggctcaagagtgtggtggggaacctgcaccgcctcggc
gtcaccaactccatcgtgtgcaactacgatggccggaccctcgccaaggtgatgaccggg
tttgaccgcgtgctgctcgatgctccctgcagcggcaccggcatcatctccaaggaccca
tctgtcaagaccagcaaggatgagaaggacatcctgcgctgcgctcacctgcagaagcag
ctgctgctcacggccatcgactgcctggacgcagcatccaccacgggggggttccttgtc
tactgcacctgctccgtcacggtggaggagaacgagtgggtggtggactacgcgctgcgc
aagcgcaacgtgaagctcgtgcccacgggcctcgacttcggcaaggagggattcacgcgc
ttcaaggagcgccgcttccacccgtcgctgaagctgacgcggcgcttctacccacacacg
cacaacatggacggcttcttcgtgtccaagttcaagaaaatctccaacgacattcccaaa
tccgccacagatgcccgtgatgtggagctcttcatggacgagcaggacgacgacgaggtt
ggctcggggcccgattctgccggggcatcgaagaaggccgctgccacggccgctgccgct
gccaaaaatgggatccactcggcaaagacgaatcacatgaacaagagaagacgtctcaac
ggcgggacggacaaccgacctggcccaaaacaagcaccgaaacagcagcagcagtctgga
ccgggacgggggcacaaagggcagactgcgaggcagcagggagggcagccgaaaggacag
tccgctcaacggccgcccgccagcaagcttgcaggacacatcggcaatgctaataataag
gggaaggccgtggggaaaaccacgttaaaggttgcaggcagtgccaccaggattcctcag
gtaggtaaggctgcgttcagggtcacagggaaggcgaccggcaagcccggcggcgttaag
gccggaggtaaatttggtgggaagaagtcggcaacgccgaccagaaaagccggggccagt
cctgggcccggcaagttcccttctcccaaacaattccgtaacaagaagggcaagcctgcc
aaggtttag
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