Lethenteron reissneri (Far Eastern brook lamprey): 133351164
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Entry
133351164 CDS
T09663
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03020
RNA polymerase
lrj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133351164 (POLR2D)
09124 Replication and repair
03420 Nucleotide excision repair
133351164 (POLR2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133351164 (POLR2D)
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133351164 (POLR2D)
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
133351164 (POLR2D)
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
133351164 (POLR2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
133351164
NCBI-ProteinID:
XP_061422143
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All DBs
Position
36:complement(3091652..3097001)
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AA seq
171 aa
AA seq
DB search
MGGGVESIPLKSHRIDCLARGRQRKGCWAMAAGGVDTKQGDFEEDASQLQFPKEFENAET
LLISEVHMLLEHRKQQNESAEDEQELSELFMKTLNYTGRFSRFKNRETIASVRSLLLQKK
LHKFELASLANLCPETAEEAKALIPSLEGRFEDDELQQILDDIQTKRSFQY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgggggggggtgtggaatcgattcccttaaaatctcaccgaatcgattgcctggcacgg
ggaaggcaacgtaagggctgctgggcgatggcggccggcggcgtggacacgaagcagggc
gacttcgaggaggacgcctcgcagctgcagttccccaaggagtttgagaacgcggagacg
ctgctcatctccgaggtgcacatgctgctggagcaccgcaagcagcagaacgagagcgcc
gaggacgagcaggagctgtccgagctcttcatgaagacgctcaactacacgggccgcttc
agccgcttcaagaaccgcgagaccatcgccagcgtgcgcagtttgctgctgcagaagaag
ctgcacaagtttgagctggcgagtctggccaacctgtgtcctgagacagctgaggaggcc
aaggctctcatccccagcctggagggtcgattcgaggacgatgaactgcagcagatactg
gacgacattcagacgaaacggagcttccagtactga
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