Lethenteron reissneri (Far Eastern brook lamprey): 133351172
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Entry
133351172 CDS
T09663
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133351172 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133351172 (DHX36)
03012 Translation factors [BR:
lrj03012
]
133351172 (DHX36)
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133351172 (DHX36)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
133351172 (DHX36)
Translation factors [BR:
lrj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133351172 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
HA2_N
nSTAND3
ATPase
AAA_19
AAA_16
NACHT
AAA_23
NB-ARC
Motif
Other DBs
NCBI-GeneID:
133351172
NCBI-ProteinID:
XP_061422160
LinkDB
All DBs
Position
36:complement(12497341..12525645)
Genome browser
AA seq
1028 aa
AA seq
DB search
MATRGGRFARGRARARCYDGPDFASMDEAGGGGGGGGGGGGGFGPPLGGRGRHPSHLKGR
DIGLWYSRKSVGKGRARDRRDRAVVEMDGAREQHITQLLHAVKKEDREEACRDMDAVQTP
GTSWRVQPMDGDASLKSLAKVEPPDWWDHSDGEEEGDRGQVPPPNEIEEVDEMAGQPLER
DHELDERLRQELHKNREGNREFVKMQEFREKLPAYRMKRDLLALINNHRVVVISGETGCG
KTTQVPQFILDDQIERGKGSACRVVCTQPRRISAISVAERVAVERAESCGNGNSTGYQIR
LQSRFPRKQGSVLYATTGIVLQWLQTDRLLRGTSHLVLDEVHERSLQSDFLLTIVRDVLP
HRPDLSVIVMSATLNAQMFSRYFGGCPIIHIPGFTFPVQEYLLEDVLEMTRYCPLQRPQQ
RSRRNLFMHGRQRRQAEQEMQQEYEQRWPEYLDSLHGKYSMSTVQALEMIDDELIDADLI
AALIRHVVLHAEDGAILVFLPGWADISKLHTTLTADQMFSAEHFIIIPLHSLMPTISQTK
VFERPPPGVRKIVIATNIAETSITIDDVVHVIDCGKIKETHFDVDNNISTMKPEWVSLAN
SKQRRGRAGRVQAGFCYHLYNGLRANMLSDYQLPEMLRTPLEELCLQIKILKLGRIEDFM
KRTMQPPSEQAVLLAITNLIGLNALSRAEELTALGFHLARLPVEPHIGKLILFGAMFSCL
DPVLGIAACLGFKDPFVIPLGKEKLADAKRRELSQNCKSDHLTIVYALQRWEQGRRGHGR
SVNDFCWEYFLSQNTLQMLHNMKDQFAEHLQAAGFVDNSNPRDPKANLHSGNEKLVKAVI
CAGLYPKVAKIRPSFSKKRRGVKVYTKPDGKVSIHPKSVNAEESDFRHQWLVYHLKLKTT
NIFLYDCTEVSPYSLLFFGGEISMQRDQDQDTISVDEWIVFRSPFRIASLVKDLRKQLDS
LLEQKITRPSPVEWQRESSESALLKAIIDLITTEEGGGGGGGGGGGGFGGGGGFGGGGGF
GGPSHRAY
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgtggaggccgcttcgctcggggcagggcccgggcccgctgctacgatggc
ccggattttgcgagcatggacgaggctggaggaggaggaggcggcggcggcggtggtggt
ggaggcttcgggccgccgctgggaggcagaggtcgccatcccagccacctcaagggccga
gatatcggcctctggtattcccgcaagtccgtcggcaagggcagggcgcgcgaccggcga
gaccgcgctgtggtggagatggacggagctcgggagcagcacatcactcagctgctacat
gccgtcaagaaggaggacagggaggaggcttgcagagatatggatgccgtccagactcct
ggcaccagctggagggtgcagccaatggacggtgatgccagtttgaagtcgctcgccaag
gtggagccccccgactggtgggaccactcagatggggaggaggagggtgatagaggacag
gtccctccgcccaatgaaatcgaggaggtggacgagatggctgggcaaccgttggagcgc
gatcacgaactcgatgaaagattgcggcaggagttgcacaagaatcgggaaggcaacagg
gaatttgtaaagatgcaggagttccgagagaagttgcctgcttatagaatgaaacgggac
ctgctggcgttgatcaacaatcaccgcgtggtggtcatcagcggggagacgggctgcggc
aagacgacgcaggttccccagttcatcctcgacgaccagatcgagcgcggcaagggctcg
gcgtgcagggtggtgtgcacgcagccgcgccgcatcagcgccatctcggtggcggagcgg
gtggcggtggagcgagcggagagctgtggcaatgggaacagcacgggctaccaaatcaga
ttacagagccggtttcctaggaagcaaggttcggtcctttacgccacaacagggatcgtg
ttgcagtggctgcagacagaccggctgctccgcggcacgagccacctggtgctggacgag
gtgcacgagcggagcctgcagtccgacttcctgctcaccatcgtgcgcgacgtcctgccc
caccggcctgacctcagcgtcatcgtcatgagcgctacgctcaacgcgcagatgttttcc
cgatactttggtggctgtcccatcatccacatacccgggttcactttcccagtgcaggag
tacctcttggaagatgtgctcgaaatgaccaggtactgcccactgcagcggccgcagcag
aggtcacgccggaacctgttcatgcacgggcggcagcggcggcaggccgagcaggagatg
cagcaggagtacgagcagcgctggcccgaatacctcgactcgctgcacgggaagtattcc
atgagcaccgtccaagcgctggagatgatcgacgatgagctcatcgacgcagatctcatc
gcggcactcatccgccacgtcgtgctgcacgcggaggacggagccatcctggtgtttctg
cctggctgggctgacatcagcaagctgcacacaactctcaccgcagaccagatgtttagt
gcagaacatttcatcatcatccctctgcactctctcatgcctacaatcagccaaacgaag
gtgtttgagaggcctccgcctggcgtgcgcaagattgtcatcgccacgaacatcgcggag
accagcatcacgatcgacgatgtggtgcacgtcatcgactgcggcaagatcaaggagacg
cactttgacgtcgacaacaacatctccaccatgaagcccgagtgggtgagcctggccaac
tccaagcagaggcggggacgtgctggccgagttcaagccggattctgctatcacttgtac
aatgggctgcgagctaatatgctgtctgactaccagctccccgagatgctccgcacgcca
ctggaggaactctgcttgcagattaagattttgaagctgggtaggatcgaggatttcatg
aaacggacgatgcaacccccttcagagcaagccgtgctgctggccatcaccaacctcatc
ggcctgaatgcgttgagccgcgcggaagagctcaccgcgctgggattccacctggcgcgg
ctgcccgtggagccgcacatcgggaagctcatcctcttcggggccatgttcagctgcctt
gacccggtgctgggcatcgccgcctgcctcggattcaaggatccgtttgtcatccctttg
ggaaaggagaagctcgcggatgccaaacggcgggagctctcccaaaactgcaagagcgac
cacttgaccattgtgtacgccctgcagcgctgggagcagggacggcggggtcacggccgg
tcggtcaacgacttctgctgggagtacttcctctcccagaacacactgcagatgttgcac
aacatgaaggaccagtttgcggagcacctacaggcggccggctttgtggacaacagcaat
ccccgcgaccccaaggccaacctgcactcaggcaacgagaagctggtgaaggcggtcatc
tgcgcaggcctttaccctaaggtggccaagatccggcccagcttcagtaagaagaggaga
ggggtgaaggtgtacacgaagcccgacggcaaggtctccatccaccccaagtcggtgaat
gccgaggagtcggacttccggcaccagtggctcgtctaccacctcaagctcaagaccacc
aacatcttcttgtacgactgcacggaggtgtcgccttactcgctgctcttcttcggcgga
gagatcagcatgcagcgcgaccaggaccaagacaccatctcggtagacgagtggatcgtg
tttcgctcgcccttccgcatcgcctccctcgtcaaggacttgagaaaacagctggactcg
ctgctggagcagaagatcacgcggccgagccccgtggagtggcagcgcgaatcgtccgaa
tcggcgctcctcaaggccatcatcgacctcatcaccacggaggagggcgggggtgggggt
gggggcggtggtggaggagggttcgggggtggaggagggttcgggggcgggggagggttt
gggggcccgtcccatcgcgcctactag
DBGET
integrated database retrieval system
