Lethenteron reissneri (Far Eastern brook lamprey): 133351206
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Entry
133351206 CDS
T09663
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133351206 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133351206 (COPB2)
Membrane trafficking [BR:
lrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
133351206 (COPB2)
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
133351206 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
BBS2_Mid
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Septum_form
HEAT_GCN1
WD40_2
Motif
Other DBs
NCBI-GeneID:
133351206
NCBI-ProteinID:
XP_061422255
LinkDB
All DBs
Position
36:complement(13734809..13756187)
Genome browser
AA seq
975 aa
AA seq
DB search
MPLRLEIKRKLTARSDRVKCVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWMVAGSDDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPSQPFLLTSSDD
MLIKLWDWEKKWTCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSTPNFT
LEGHEKGVNCVDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERAWCVSGLRGSNTIALGYDEGSIIVKLG
REEPAMSMDSSGKIIWAKHSEVQQANLKAMGEAEIKDGERLPLAVKDMGSCEIYPQTISH
NPNGRFVVVCGDGEYIIYTAMALRNKTFGSAQEFVWAHDSSEYAIRENSSTVKLFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSMSGLAFFDWESTELVRRIEIQPKNIFWSDSGELVALA
TEDSFFILRYHSEKVVAAQETHQGVTEDGVEDAFEVLGEIQEVVKTGLWVGDCFIYTNSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNMVSYSLLLSVLEYQTAVMR
RDFDMADKVLPTIPKEQRTRVAHFLEKQGFKSQALAVSCDPEHRFELALQLGELKIAYQL
ATEAESEQKWKQLAELATSRCQFQLAQECLHRAQDYGGLLLLATASSDQAMVTRLAQGAE
RDGKNNVAFLSYFLQGNLDKCLEVLINTNRLPEAAFLARTYLPSEVSRVVKLWRESLAKS
NQKAADSLADPTEYENLFPGLREAAAGELYLRTTSSTRLACQYPLVTPNEERNVLEEAKG
YTPKETTAAKQLVVGGIQEKPTIVQEEEKVEEEEEVEEEVEDDVAAEEQGENDNDPDDDD
ADVVEDTDKKHLELVTADSDDCTPGAGAEAANIHKSEPVLSKEEKMLQELEEDLDNLEID
ENIDTSDINLDEDFE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcgactggagataaagcgcaagctaacggcacgctcggaccgcgtgaagtgt
gtggacctacacccgagcgagccatggatgctggccagcctctacaacggcagcgtgtgc
gtgtggaaccacgagacgcagacgctggtgaagacgtttgaggtgtgcgacctgccggta
cgcgctgccaagtttgtggctcgcaaaaactggatggttgctggctcggatgacatgcag
atccgtgtattcaactacaatacgctggagcgtgtgcacatgttcgaggctcactcggat
tatatacgctgcatcgccgtgcacccgagccagcccttcctactcaccagcagtgatgac
atgctcatcaagctgtgggactgggagaagaagtggacgtgctcacaggtgtttgaaggc
cacactcactacgtcatgcaaattgtcatcaaccctaaggacaacaaccagtttgccagc
gcttcgctggaccgcactatcaaggtgtggcagttgggttcgtccaccccgaacttcact
ctggagggacatgagaaaggggtcaactgcgtcgactactacagcggtggcgacaaaccc
tacctcatctcgggtgccgatgaccgcctcgttaaaatctgggactaccagaacaagacg
tgcgtccaaacactggaggggcacgcacagaacgtgtcgtgcgtctccttccaccccgag
ctgcctatcatcatcaccggctccgaggacggtacggtgcgaatctggcactcaagcacc
taccgtctggagagcacgctaaactatggcatggagcgcgcctggtgcgtgtctggactg
cgcggctccaacaccatcgccctgggctacgacgagggcagcatcattgtcaagttggga
cgcgaggagccggccatgtcgatggactcgagcggcaagatcatctgggcgaagcactct
gaagtgcaacaggccaatctgaaggccatgggcgaggcggagatcaaggacggcgagcgg
ctgcctctagctgtcaaggacatggggagctgcgagatttacccacagactatctcgcac
aaccccaacggccggttcgtggtggtgtgcggtgacggggaatacatcatctacactgcc
atggctctgcgcaacaagacctttggctcggcgcaggagtttgtctgggcccacgactcg
tctgagtatgctattcgagagaacagcagcactgtgaaactgttcaaaaacttcaaggag
aagaaatctttcaaacccgactttggagcagaaggaatctacggcggctttctgttgggt
gtgcgctccatgagtgggttggcgttcttcgactgggagagcacagagctcgtccgacgc
attgagatccagcccaaaaatatcttctggtcggattctggtgagctggtcgccttggca
acggaggactccttcttcatcctgcggtaccactcggagaaggtggtggccgcacaggag
acgcaccagggcgtcacagaggatggcgtcgaggatgcgttcgaggtgctgggcgagatc
caggaggtggtgaagaccggcctatgggtcggggattgcttcatctacactaactcagtc
aaccgcctcaactattacgtgggcggcgagattgtcaccattgcgcatctggacaggacg
atgtacctgcttggctacatccccaaggacaaccggctgtacctgggcgacaaggagttg
aacatggtgagctattcgctgcttctgtccgtgctggagtaccagacggccgtgatgcgg
cgcgacttcgacatggccgacaaggtgctgcccacgatccccaaggagcagcgcacgcgc
gtcgctcacttcctggagaagcagggattcaagtcgcaggcgttggccgtatcatgtgac
cccgagcaccgctttgagttggcgctgcagctcggggaattgaagattgcgtaccagctc
gccaccgaggcagagtctgagcagaagtggaagcagctggcggagctggcgacgtcacgc
tgtcagttccagctggcgcaggagtgcctgcaccgtgcgcaggactacggcggcctgctt
ctgctcgccacggcctcgtcggaccaggccatggtgacgcggctcgcgcagggcgccgag
cgcgatggcaagaacaacgtcgccttcctctcctacttcctgcaggggaacctggataag
tgtcttgaggtgctgatcaacaccaatcgcctgccagaggcggcattcctcgcccgcaca
tacttgcccagcgaagtgtcaagggtggtgaagctgtggcgcgagtcgctcgccaagagc
aaccagaaggcggccgactcgctcgccgaccctaccgagtacgagaacctcttcccaggc
ctgcgcgaggccgccgccggcgaactctacctgcgcactacgtcttctacacggcttgcg
tgccagtaccctcttgtgacgccaaacgaagaacgcaacgttcttgaggaggctaagggc
tacacacccaaagagacgacagctgctaaacagttggttgttggtggcattcaggaaaaa
cctacaatcgtgcaggaggaggaaaaggtggaggaggaggaggaggtggaagaggaggtg
gaggatgatgtggcagcggaggagcagggagaaaacgacaatgaccctgatgatgatgat
gctgatgttgttgaggacacggataaaaaacatcttgaattggtcaccgctgacagcgat
gactgcacacccggagctggagccgaggcagcaaacatccacaagagtgagcctgttctt
tcaaaggaggaaaagatgttgcaggagctggaggaagacctggacaacctggagattgac
gagaacatcgatacatccgacatcaacctcgacgaggactttgagtga
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