Lethenteron reissneri (Far Eastern brook lamprey): 133351207
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Entry
133351207 CDS
T09663
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04120
Ubiquitin mediated proteolysis
lrj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133351207 (UBE4B)
04120 Ubiquitin mediated proteolysis
133351207 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133351207 (UBE4B)
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133351207 (UBE4B)
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
U-box type E3
133351207 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
133351207
NCBI-ProteinID:
XP_061422260
LinkDB
All DBs
Position
36:complement(13761239..13796294)
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AA seq
1311 aa
AA seq
DB search
MEELSPDEIRRRRLARLAQPATPLTSPQRETAPPIAGPATPVASSPPATAQGPSIAQGPS
TSPSVPVEMSQSSSLSSSPSAGAESQSQGLSRSQSMEIDRSAPDKSGSQVDVDSGIENME
VEESDRKDKRGLNVKGLMQASDDTEMTKDQLLQLVCKILRVSWKQPGRDLIYLPALAAEF
LAAPRSVFSDWKDLVGQILVEVLVNLTRSDAQAPADLPGSVDSVEENPFAGLATGPLAAS
QPVPVPPGRRDVSGSDPVALCSFPRSPGACGGEGASSSLGGSQGTSLYSASPSPWFRGLG
ASALPSRPSPRPSPPSPFPATAGAASPTPGQFVLNTPAVHSPMFIGTPQRAALAASPRLD
DPVALLLSLVAAHGSRRHRSGHGGDDDDFDDNDDEDEEGVLGTSSNSSAAIGSDATALCL
PAEHRRDVFSMESCAETHALNYLVECFDRVAMEERAAPKMCSLPEVGRVLGQIRTQCVAH
ATLVLQGALTQPRSALHPSLLVPYLLCRNLPVGFIQEMVRASCLDQDAFSQVFMPVVQGL
AQACCECSLENDNFKFPLMALAELCEVKVGNTRPICSLVALHELWLPDSLTGGGGRELQR
LSFIGSVFSLSAFSEDDPKVAEKYFSGPTLTLDNTRVVSQALQHHLETARMEQFKVLHSM
LLNGGTREATLAYMAAVVNRNGKKSQLQTDDRLVSSDGFMLNFLWVLQHLAARIKLETID
PLYPFHPRCRLTLGPDETRLKATREELAVWLERLRSEPCCQADVKFPTECFFLTLHCHHL
SILPACRRYTRRLREIRDLNRSLEELKSKEEETPSTGRHRELLKRFKARLRRLVRAKACA
DVVLLDENLLRRCLHFYGSMVCLLFRIVDPVNPKPLLPLNPEIPEAFSALPEFYIEDIAE
FLLFIIQYSPQVLQSEPCGPDLATFLLVFVCSHTYLRNPYLLAKLVEVLFVLNPSVQPRT
ARFHEMLENHQLGTRHLAPSLMKFYTDVEQTGASSEFYDKFTIRYHISAIFKSLWSNPAH
QATFLEEFNSGSQFVRFINMLINDTTFLLDESLDSLKRIHELQEEMRNKEAWDRLSQEQQ
QSRASQMSQDERQCRSYLTLAMETLDMFHYLTKQVQKPFMRPELSDRLAAMLNFNLQQLC
GPKCRDLKVESPEKYGFEPRRLLDQLTDIYLHLDSPEFAHAIANDERSYRKELFEDAVGK
MKKAGIKTAIAVERFRLLAERVDEMVQHNVQADHDYSDAPEEFRDPLMDTLMRDPVRLPS
GKVMDRSIIIRHLLNAHTDPFNRQPLDETMLVPETELKERIQAWMREKHRK
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcagcccagacgagatccgcaggcgccgcctcgctcgtttggcgcagccg
gccacgccgctcacgtcaccgcagcgagagacggcaccgcctatcgcggggcccgcaact
cccgtagcctcatcacccccggccacggcccaggggccatccatagcccagggtccgtcg
acctcgccgagcgtgcccgtggagatgagccagagcagctctttgagcagctccccgtcg
gccggcgccgagtcgcagtcgcaaggcctatcgcgctcacagagcatggagatcgaccgc
tctgcacccgacaagagtggatctcaggtggatgtggactcggggatagagaacatggaa
gtggaggagagcgaccgcaaggataagcgaggcctgaacgtaaagggcttgatgcaggcc
tcggacgacacggagatgaccaaggaccagctgctacagctggtgtgcaagatcctgcgg
gtgtcgtggaagcagcccggccgggacctgatctacctcccagcgctcgcggccgagttc
cttgccgccccacggagcgtgttttccgactggaaggacctggtgggacagatcctcgtg
gaggtgctcgtgaacctgacacgctcggatgcgcaggctcctgcggatctccctggctcg
gtggactccgtggaggaaaatccgttcgccggtcttgccaccggacccctcgcagcatcg
cagccggtgcccgtgccccccgggcggcgagatgtctccggcagcgaccccgtggcgctg
tgcagctttcccagaagccccggcgcatgcggtggagagggtgccagctcgagtctgggt
ggcagtcagggcacaagtctgtacagtgccagccccagcccctggttccggggtctcgga
gcatcagccctcccatcccgcccctctcccagaccatccccgccgtccccctttcctgcc
accgccggcgctgcttctccgaccccagggcagttcgtgctcaatactcctgctgtgcac
agtcccatgttcattggaaccccgcagcgcgcagcgttggcagcgtcgccacgccttgac
gacccggtcgccctcctcctgtctctcgtggcggctcacggatcgcgccgccaccgctcg
ggccacggcggtgatgatgacgacttcgatgataacgatgatgaggatgaggagggtgtg
ctcggcaccagcagcaacagcagcgccgcaatcggcagtgacgcgacggcgctgtgcttg
ccagcggagcaccgcagagacgtcttctcgatggagagctgcgcagagacgcacgcgctc
aactacctcgtcgagtgcttcgaccgcgtcgccatggaggagagggcagcgcccaagatg
tgcagccttcccgaggtcggccgcgtgctggggcagatccgcacgcagtgtgtggctcac
gcaacgctcgtgctgcagggggcgctgacccaaccgcgatctgcactacatccgtcgctg
ctggtgccatacctgctgtgccggaatttgccggtcggcttcattcaggagatggtgagg
gcctcctgcctggaccaggatgcgttcagtcaggtgttcatgccagtggtgcaaggcctt
gcccaggcctgctgcgagtgctcgctggagaatgacaatttcaagttcccgctcatggca
ctggcggagctgtgcgaggtgaaagtgggaaacactcgccccatctgctccttggttgca
ctgcacgagctgtggctgcccgactcgctcactggtgggggcggccgcgagctgcagcgt
ctctccttcatcggctctgtcttctcactctccgccttctccgaggacgaccccaaggtg
gcagagaagtatttctcggggccaacactcacactggacaatacgcgcgttgtcagccag
gccctgcagcatcacctggagacggcgcggatggagcagttcaaggtgctgcacagcatg
ctgctcaatggaggcacgcgggaagccacgctcgcgtacatggctgccgttgtcaaccgc
aacggcaagaagtcacagctgcagacggatgaccgcctggtgtcgtccgatggcttcatg
ctcaacttcctgtgggtgctgcagcacctggcggcgcggatcaagctggagactatagac
ccgctctacccattccacccgcgctgccggctgacactgggccctgacgagacgcggctg
aaggcgacgcgcgaggaacttgctgtctggctggagcgactgcgctcggagccgtgttgc
caggccgacgtcaagttccccacggagtgcttcttcctcacgctgcactgccaccacctc
tccattctccctgcgtgccgacgctacacacggcgcctgcgcgagatccgcgatctcaac
cggagcctagaggaactcaaaagcaaagaggaggagacaccaagcactgggcgccaccgc
gagctgctcaaacgcttcaaggcgcggctcaggaggctggttcgtgcgaaggcatgtgcg
gacgtggtcctgttggacgagaatctgctgcggcgttgcctgcacttctatggctccatg
gtctgtctgctcttccgcatcgtcgaccccgtcaaccctaagcccctgctgccgctgaac
cccgagattccagaggcattctcagctttgccagagttctacatcgaagacatcgccgag
ttcctgctcttcattatccagtacagcccgcaggtgctgcagagcgagccgtgcgggccc
gacctcgccaccttcctgctggtgttcgtgtgcagccacacatacctgcgcaacccgtac
ctactcgccaaactggtggaggtgctgttcgtgctgaaccccagtgtgcagccacgcacc
gcgcgcttccacgagatgctggagaaccaccaactgggtacgcgccacctggcgccatcg
ctcatgaagttctacacagacgtggagcaaacaggcgccagcagcgagttctatgacaag
ttcaccatccgctaccacatcagcgccatcttcaagagcctgtggagcaatccggcacac
caggccaccttcctggaggagttcaactcggggagtcagtttgtgcgcttcatcaacatg
ctgatcaacgacacaacgttcctgctggacgagagcctggactctctcaagaggatccac
gagctgcaggaggagatgcgcaacaaggaggcgtgggatcgcctctcccaggagcagcag
cagagccgggcgtctcagatgagccaggacgagaggcagtgtcgctcctacctcacgctc
gccatggagaccctcgacatgttccactacctcaccaagcaggtccagaagcccttcatg
cggcccgagctgtctgatcgcttggcggccatgctgaacttcaacctgcagcagctgtgc
gggcccaagtgccgggacctgaaggtggagagccctgagaaatacggcttcgagccgcgc
cgcctgctcgaccagctcaccgacatctacctgcacctcgattcgcccgagtttgcgcat
gcaattgccaatgacgagcgctcgtaccgaaaggagctgtttgaggatgccgtgggtaag
atgaagaaggccggcatcaagacggcaatcgccgtggagcgcttccgcctgctggcggag
cgagtggacgagatggtgcagcacaacgtgcaggccgaccacgactacagcgatgcgccc
gaggagttccgcgacccgctcatggacacgctgatgagggaccctgtgcgcttgccgagt
ggcaaggtgatggaccgcagcatcatcatccggcacctgctcaacgcgcacaccgaccct
ttcaaccggcagccactcgacgagaccatgctggtgccagaaacggagttgaaggagagg
atccaagcgtggatgcgagagaagcacaggaagtga
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