Lethenteron reissneri (Far Eastern brook lamprey): 133351287
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Entry
133351287 CDS
T09663
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133351287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133351287
03021 Transcription machinery [BR:
lrj03021
]
133351287
03036 Chromosome and associated proteins [BR:
lrj03036
]
133351287
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Helix-turn-helix
ARID
133351287
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133351287
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133351287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
133351287
NCBI-ProteinID:
XP_061422369
LinkDB
All DBs
Position
5:complement(3753368..3790805)
Genome browser
AA seq
1875 aa
AA seq
DB search
MHAAALGPYPPSGGPGGYPPQPGGGLYGPQQGNYQRPSGYGNMPNAAAYAGTGPAMGMAG
NSSMQASGPAQAYGGMGAMGRGPPSGLQGRPYNQAMGGPANSVPGHAGLSSMVPNSAMGG
GGGSGHGLGSNSMGGGGGGGAGTPGPGQGPGVVGQAGGLPMAAGGIALGQGSVGMGPPSS
GINRKAQEAAAAVMQAAANSTHTRAQYSRPQPQSYPAQPGPTVRPMYPPQHPNYGNAQAQ
AAMLHQHEQYGQSGYQGMNQAGGMMGGGSPYGQQQQQLSGGGPTMMNQGGPPYSVPGHMG
PNSTGNSGPPQHIMSPPGTPGMTPGPEGGMGLQDGKTPPPPPSENKSKKSGSSTTTGESI
SRLYELGCEPERRLWVDRYLSFMDERGTPVPALPAVGRKPLDLYRLYVSARDIGGLTQVN
KCKKWRELATGLGVGTSSSAASSLKKQYIQFLFAFECKVERGEEPPSDLINPPVPADTKK
HAAKVQPPSPAGSGSMQGPQTPQSTSSSMTEGAAEMKPPTPASTPHSQPPPTAGNRNSTI
SLQDPFSENGDPAFQRRNALTPNPTNAPYHSLTPPAGAGPDALARAAYEQGRAEGQYGAP
RDPRDPRDPRDPRDPYNPMRKAVPVPDPYGSQGPSARLPPDPYGRGPPTGLAGLGSMSQR
HPYPYAPGYDRRAEHALSVEAGVGPVNPLVPPSVADPGMYSPGGRGPPQPRHDNYGQPYP
GQGPHQGQPPYPPPGQHAMYQQQQQQPQPQPNYKRPMEGMYGPPAKRHESEAYGLAYPAQ
PPSDPYAGYPVPGAAGAYGDRRPPPTHAPAPASQFPFGYAPPDRAPPQAPQAIVGADSGP
PPAQGSAGGQPGWGPARAGGGPATGGPGDAAYPPYPSRPPSQAPPYPGAAGGGRGAGEDG
GAPAGEPPGPRAPGEWHYAQRPAPYAATPAPQPHGHATPGQRPQYRTAGPAGYPQVSPSK
PPYLSAGGVRMQKVGPPVPASQLPGGGPPAPLALLPPPRKDPPFPPGCVEATQAAVKARR
RLTAKDVGTPEAWRVMMSLKSGLLAESSWALDSINVLLHDDATVASFSLSQLPGLLELLV
EYLRRCLIHIFGILRECEIGGRAAYDDDDDDEEEDEEEEEDGEDGAAQDAEEHAAAWAGH
WVDDDDEEEEGEEGEEGEGEEDPGWDEEEQEEQEEQEDEEDEEEEEEEDDEACPAGPPDD
DVNDDAGGDGAVAARANANERPRRRGGAAAPRRPPGPSAERKRKQASRFDRRPLALALED
ADGAYVLDRSARLGQPREFDSGLRHWRVGGGDTTCHIQTHFERRDERPRSPAPPRQPQQS
PQQHEQQQQQQQRPAQQQRQQNGPVEGARPNGESNGARADGEPAGGEEGDAPPVRNGTGG
EEAAERAAGGGEPAPGSPDGAGLARGSPKPAARAGNDADRRPSASSRRETAQRGQRQQLG
QQRKRQQMLEDEPQGRDEAPLSRTRPWQESLVGRCACVSNIVRSLSFVPGNDAEMARHPG
LLVILGRLVLLCHVHPDRRPPLRQCRRPPPDASGDEAGGDARRPAAAGERGPKEEREEPA
ATKAEKRPDGDDGDGAAREPADGAGRTERRPCGGGDAWGGWGAWAPASVVPAAWQEEWLL
ECVETLRENALVTLANIAGRLDLSLYAESVCLPVLDGLLHWAVCPAAEARDPFPSLAPCA
VLSPQRLALETLSKLGVQEGNVDLILATPPFSRLECLLSALVRFVAERRNPVCREMSVAL
LASLVQGGGADGVPARAVARHKGTVGSLVCFLEDGLMAALQQTQQQTQQTQQQQQAQQQG
GGGGGGGGAAASLEPPSVDMLRRAAGVLLALARLDGCRAEFVLYEGRLLDIAMSHILNPY
ISPVVADVLYVLGHT
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggccgccctggggccttacccgccctccgggggcccgggggggtaccctccc
cagccagggggaggcttgtacggaccgcagcaaggaaactaccagcgcccgtccggctac
ggcaacatgcccaacgcggcggcctacgccggcacgggccccgccatgggcatggccggc
aacagcagcatgcaggcctcggggcccgcccaggcctacggcggcatgggagccatgggc
cggggcccgccctcgggcctgcagggccggccctacaaccaggccatgggcggccccgcc
aacagcgtgcccgggcacgccggcctctcctccatggtgccgaacagcgccatgggcggc
ggcggcggcagcggccacggcctgggcagcaacagcatgggggggggcggaggaggaggg
gcggggacgccgggcccaggtcaaggccccggggtcgtgggccaggcgggcggcctgccc
atggccgccgggggcatcgctctgggtcagggcagcgtcgggatggggcctccctcgtcc
ggcatcaaccgcaaggcgcaggaggcggccgcagcggtcatgcaggcggcggccaactcg
acgcataccagggcgcagtacagccgccctcagccgcagagctacccggcccagcccggc
cccaccgtgcggcccatgtacccgccacaacaccccaactacggcaacgcccaggcgcag
gccgccatgctgcaccagcacgagcagtacgggcaaagcggctaccagggcatgaaccag
gcgggaggaatgatgggcggaggctctccttacgggcagcagcagcagcagctgagcggg
ggcggcccgaccatgatgaatcaagggggcccaccctactccgtcccagggcacatgggg
cccaactccacaggaaactcaggccccccccagcacatcatgtcccccccggggaccccg
gggatgaccccggggcccgagggaggcatgggcctccaggacgggaagacccctcctcca
ccgcccagcgagaacaagtctaagaagtccggctcgtccacgacgacgggcgagagcatc
agccgcctgtacgagctgggctgcgagcccgagcgccgcctctgggtcgaccgctacctc
tcgttcatggacgagcgtggcacgccggtgcccgcgctgccggccgtcgggcgcaagccg
ctcgacctctaccgcctctacgtgtcggcgcgcgacatcggcggactcacgcaggtgaac
aagtgcaagaagtggcgcgagctggcgacggggctgggcgtgggcacgtcgagcagcgcc
gccagctcgctcaagaagcagtacatccagttcctgttcgccttcgagtgcaaggtggag
cgcggcgaggagcccccctccgatctcatcaacccgcccgtgccggccgacaccaagaag
cacgccgccaaggtgcagccgccgtcgccagccggctcgggctccatgcaggggccccag
acgccgcagtcgaccagcagctccatgacggagggggcggccgagatgaagccccccact
ccggcatccaccccgcacagccagccgccccccaccgcgggaaacaggaacagcaccatc
agcctgcaggaccccttctcggagaacggggacccggccttccagcgccgcaacgcactc
acccccaaccccaccaacgccccttaccacagcctcaccccgcccgccggtgcggggccc
gacgcgctggcgcgggccgcctacgagcagggccgggcggaggggcagtacggtgccccc
cgcgacccccgcgaccctcgcgacccccgcgacccccgagacccctacaaccccatgcgc
aaagcggtccccgtgcccgacccgtacggctcccaggggccgtcggcccggctgcctccc
gacccctacggccgggggcctcccacgggtctggccggcctgggcagcatgagccagagg
cacccgtacccctacgcgccgggctacgaccgccgggcagaacacgcgctgtcggtggag
gccggagtgggcccggtaaacccgctcgtcccgccgtccgtggcggaccccgggatgtac
tcccccggggggcgcgggcccccccagcccaggcacgacaactacggacagccgtacccg
gggcagggcccccaccagggccagccgccctaccccccgcccggccagcacgcaatgtac
cagcagcagcagcagcagccgcagccacagccgaactataagcgacccatggagggcatg
tacggcccgccggccaagcggcacgagagcgaggcctacggcctggcctacccggcccag
ccgccctccgacccctacgcgggctaccccgtgccgggggccgcgggggcctacggggac
cgccggccgccccccacgcacgccccggcccccgccagccagttccccttcggctacgcg
ccgcccgaccgcgcgcccccgcaagccccccaggccatcgtgggcgccgactcgggcccc
ccgccggcgcaggggtcggcgggggggcaaccgggctgggggccggcgcgcgccgggggg
gggccggcgacgggcggccccggggacgcggcgtaccccccctacccgagccgcccgccc
tcgcaggccccgccgtacccgggggcggcggggggcggccgcggcgcgggcgaggacggg
ggggcccccgcgggggagccgccgggcccgcgggcgccgggcgagtggcactacgcgcag
aggcccgcgccgtacgcggcgacgccggcgccgcagccccacggccacgcgacgcccggc
cagaggcctcagtaccgcacggccggccccgccggatacccgcaggtgtctccgagcaag
ccgccgtacctctccgccggcggcgtgcggatgcagaaggtggggccccccgtgccggcg
tcgcagctgccggggggcgggccccccgcgccgctcgctctgctgccccccccgcgcaag
gacccccccttcccgccgggatgcgtggaggcgacgcaggcggccgtgaaggcgcgccgc
cgcctcaccgccaaggacgtgggcaccccggaggcgtggcgggtgatgatgtcgctcaag
tcgggcctgctggcggagagcagctgggcactggactccatcaacgtgctgctgcacgac
gacgccaccgtcgccagcttcagcctctcgcagctgcccggcctgctggagctcctcgtc
gagtacctgcgccgctgcctcatccacatcttcggcatcctgcgcgagtgcgagatcggg
ggtcgcgccgcttacgacgacgacgacgacgacgaggaggaggatgaggaggaggaggag
gacggcgaggacggcgccgcgcaggacgcggaggagcacgcggccgcctgggccggccac
tgggtcgacgacgacgacgaggaggaggagggagaggagggagaggagggagagggagag
gaggacccgggttgggacgaggaggagcaggaggagcaggaggagcaggaggacgaggag
gacgaggaggaggaggaagaggaggatgacgaggcctgccccgccggccctcccgacgac
gatgtcaacgacgacgcaggcggtgacggcgccgttgccgcgagggcaaacgccaacgag
cggccgcggcgacgggggggagcggccgccccccgccggccgccggggccgtccgccgag
cgcaagcgcaagcaggcgagccgcttcgaccggcggccgctggcgctggctctggaggac
gcggacggggcctacgtgctggaccgctcggcccgcctgggccagccgcgggagttcgac
agcggcctgcggcactggcgggtgggcggcggcgacaccacgtgccacatccagacgcac
ttcgagcgccgggacgagcggcccaggagcccggcgccgccgcggcaaccgcaacagtca
ccgcagcagcatgagcagcagcagcagcagcagcagcgaccggcgcagcagcagcggcag
cagaacgggcccgtggagggcgcgcggcccaacggcgagagcaacggcgcgcgcgcggac
ggggagccggcgggcggggaggagggcgacgcgccgcccgtgcggaacggcacgggcggc
gaggaagcggcggagcgagcggccgggggcggcgaaccggcgccgggctcgccggacggc
gccggcctcgcccggggcagccccaagccggcggcgagggccgggaacgacgcggaccgc
aggccgtcggcctccagcaggcgggagacggcgcagcggggccagcggcagcagctgggc
cagcagcggaagcggcagcagatgctggaggacgagccgcagggccgcgacgaggcgccg
ctgagccgcacgcgtccctggcaggagtcgctggtggggcgctgcgcctgcgtctccaac
atcgtgcgcagcctgtccttcgtgccgggcaacgacgccgagatggcgcgccacccgggc
ctgctggtcatcctgggccgcctcgtgctgctgtgccacgtccaccccgaccgccggccg
ccgctgcgccagtgccggcgccccccgccggacgcctctggcgacgaagcggggggggac
gctcgccgccccgcggccgccggcgagcgggggccgaaggaggagcgggaggaaccggcg
gcgacgaaggccgagaaacggccggacggcgacgacggcgacggcgccgcgcgcgagccc
gccgacggcgccggcaggacggagcggaggccgtgcggcgggggcgacgcgtgggggggg
tggggggcgtgggccccggcgtccgtggtgcctgccgcctggcaggaggagtggctgctg
gagtgcgtggagacgctgcgcgagaacgcgctggtgacgctcgccaacatcgcgggccgc
ctcgacctgtcgctctacgccgagagcgtctgcctgccggtgctcgacggcctcctgcac
tgggccgtgtgcccggcggccgaggcgcgcgaccccttcccgtcgctggcgccgtgcgcc
gtgctctcgccgcagcggctcgcgctggagacgctgtcgaagctcggcgtgcaggagggc
aacgtggacctcatcctcgcgacgccgcccttctcgcggctcgagtgcctcctgagcgcg
ctggtgcgcttcgtggccgagcggcgcaacccggtgtgccgcgagatgagcgtggcgctg
ctcgccagcctcgtgcagggcggcggcgccgacggcgtgccggcccgcgccgtggcgcgg
cacaagggcaccgtgggcagcctcgtgtgcttcctcgaggacgggctgatggctgcgctg
cagcagacgcagcagcagacgcagcagacgcagcagcagcagcaggcgcagcagcagggc
ggcggcgggggcggagggggcggggcggccgcctcgctggagccgcccagcgtggacatg
ctgcggcgtgccgccggcgtgctgctggcgctggccaggctggacgggtgccgcgccgag
tttgtgctgtacgagggccggctgctggacatcgccatgtcgcacatcctcaacccctac
atctcccccgtcgtggccgacgtgctttacgtgctgggccacacgtga
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