Lethenteron reissneri (Far Eastern brook lamprey): 133351738
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Entry
133351738 CDS
T09663
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03083
Polycomb repressive complex
lrj04980
Cobalamin transport and metabolism
lrj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133351738 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
133351738 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133351738 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133351738 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133351738 (HCFC1)
03029 Mitochondrial biogenesis [BR:
lrj03029
]
133351738 (HCFC1)
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133351738 (HCFC1)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
133351738 (HCFC1)
HMT complexes
COMPASS/SET1 complex
133351738 (HCFC1)
MLL-HCF complex
133351738 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
133351738 (HCFC1)
Mitochondrial biogenesis [BR:
lrj03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
133351738 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
133351738
NCBI-ProteinID:
XP_061423183
LinkDB
All DBs
Position
38:complement(6031883..6068034)
Genome browser
AA seq
1618 aa
AA seq
DB search
MAAPTLKWKRITGSTGPVPRPRHGHRAVTIKELMVVFGGGNEGIVDELHVYNTATNQWFI
PAVRGEIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPKPPKHG
PPPCPRLGHSFSLIGNKCYLFGGLANDSEDPKNNIPRYLNDLYVLELKPGSGVMGWDIPV
TQGAPPPPRESHTAVVYPQPPETSPGTPTQPALTQPLGRRPMLVIYGGMSGCRLGDLWTL
DVDTMTWSQPMMSGIAPLPRSLHSATVIGPKMFVFGGWVPLVLEDAKVATHEKEWKCTSN
LACLNLETMTWQSVPTDTSEDNNPRPRAGHCAVSINSRLFVWSGRDGYRKAWNNQVCCKD
LWYLETERPPAPGRVQLVRASTDSLEVSWGAVSTADAYLLQLQKYDIPPPAGATPVQAPA
GVSAMDQASASAAAAAAAAMAGDKSPSHAATAPLMAAGIPTSPMPQMTTTGGIRLLGASA
AGGIGAANAQGTTVVRVQTTQGAGASSSPIFTVTRKPTNPGITVSALPTTVSGTPQMSGM
AALAAAAAATQKIPAGASSLAATTTTLAAGSTGIPGTIKVPPGTVVRHSLQVNAPATSML
KSAMAQVSSPGTVSGTSGRPIITVHKSGTISVMPQAQVVTTMIGGVTKTITLVKSPLSVA
GGGTLLSNLGSLVTLMQTKPVQSGVVTSQASSLAHFIQTKGTLPPGATIVKLVTSADGKP
ATLITTSQAGGMTGTAQILNIGAMAGHTGTVMGKPGGATIIKTIPMSALMGQAGATGGTQ
AGGMKSPITYITTKVMTSGTGAPGKIITAMPKLGSTQSGVTQVLLRGTGPAGTILRAVTP
MSAATMMGGVRLVSPATVTAGKPALTTLVVKGTTGMTTLGTVTGALSTQTAAGVTCVPAA
LATPVTTLATIAALSSQVAGVAGPSAPNVTLTHVTSTTAVPATSINQPVMLAQQLVKPQT
VAVSVVPVAQPPAEVVAPPECKSPPHETSETNTTNTSTTTTASMDPNQVQPPPTGEGGIP
ESVHGETATAGTTNTATNTVSAAQPRAVTNVTQSTPAPGPAISSVASLHLQTIASTSDQA
ASSETAATTSNSGGGGGAAAVASTVSATTTIATAATATVTVAAAVAIPPAPKAGEAAPQP
AQTVNTAVNPPASTNVAPAPATVAAVVVAPPQPPSSSAPSAPAAAAAATAITMTATTATV
AIKVAVPAPLPTTTIILPPTNAAPASVSTPACLSSAETATVVLQPASHAGSLLPSKIEPL
APSDALAPADSLNDPAPESNHFPVLAGLAPSSTLLTAPVPTVVPILPTVPILPTVVPILP
TVPILPTIPIVSTVPASPAKLQAATVLAQVANNVPSSPTIITIAKPEVVEAAPKPLAKKE
SAPWFDVGIFKVTNTVVTRYHLPPDDSSMEDGDASSGILDHSSLKLQSLQPGTAYKFRVA
GVNALGRGSFSEISAFKTCLPGFPGAPSAIKISKTPEGAHLTWEPPALKFGRILEYAVYL
AVKRPNQPPAQAAGDGKTGAPAAAAQLAFARVYCGAEPSCLVANASLAGAHLDTGAKPAI
IFRISARNQKGYGPATQVRWLQDAGKDAPGSKPMAKRPITSPETKTPMGLKKPKQEAV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccacgctcaagtggaagcggatcactggctcgacgggacctgtgccgcgg
ccgcgccacggccaccgcgccgtcaccatcaaggagctcatggtggtgttcggcggcggc
aacgaaggcatcgtggacgagctgcacgtctacaacacggcaacaaaccaatggttcatc
ccggcggtgcgtggcgagatcccaccgggctgcgcagcgtacggcttcgtgtgcgatggc
acacggctgcttgtgttcggcggcatggtggagtacgggaagtacagcaacgacctgtac
gagctgcaggcgagccgctgggaatggaagcgcctaaaaccgaaacccccgaagcacggg
ccgcccccgtgtccccgactgggccacagcttctcgctcatcggcaacaagtgttacctt
tttgggggtcttgccaacgatagcgaggaccccaagaacaacattcccaggtatctgaac
gacttgtacgtgctggagctgaagccgggctcgggggtgatgggctgggacatccccgtg
acacagggtgccccgccacccccccgcgagtcccacacggctgtcgtctacccccagccc
cctgagacctcccctggaaccccgacacagccggcactcacccagccgctgggacgtcgg
cccatgctcgtcatctacggaggcatgagcgggtgccgcctcggagatctgtggacgctc
gacgttgacacaatgacctggagccagccaatgatgtcgggcattgctcctctccctcgc
agtcttcactctgccacagtcatcggacccaaaatgttcgtatttggaggatgggtgccc
cttgtgttggaagatgcaaaagtagcgacacatgagaaggaatggaaatgcaccagcaac
ctcgcctgcttaaacctggaaacgatgacctggcagtcagtgccgactgacacgtctgag
gataacaacccgcgcccgcgcgctggccactgtgccgtgtccatcaactcacgcctgttt
gtctggagcggccgagatggctaccgcaaggcctggaacaaccaggtgtgctgcaaggac
ctgtggtacctcgagacagagaggccaccggcgccgggtcgtgtgcagctggtgcgcgcc
agcacggactcgctcgaggtgagctggggtgcagtcagcacggctgacgcctacctccta
cagctacagaagtatgacatcccgccgccagccggcgccaccccagtgcaggcccctgca
ggcgtcagcgccatggatcaagcctctgcctctgcagccgccgctgctgctgccgccatg
gccggcgacaagagcccctcgcacgctgccacggcgccactgatggctgccggcatcccc
actagccccatgccacagatgactacgaccggaggcatccgtctgctgggcgcatcggcg
gccggaggaattggggcagccaacgctcaaggaacgaccgtggtgcgggtgcagaccacg
cagggagccggtgcatcctcttctccgatcttcaccgtcacacgcaagcccaccaacccg
ggcatcaccgtttccgccctacccacgaccgtttctggcacgccacagatgagtggcatg
gcagcgcttgctgctgcggctgccgccacccaaaagatccctgcaggggcctcttcgttg
gcagccaccacaaccacactcgcagctggatccacaggcatcccaggcaccattaaagtt
cctcccggcactgttgtgcgccattcccttcaggtgaacgctcctgcgacctccatgctg
aagtcggccatggcccaggtgtcttcacctggaacagtgtcggggacctcgggcaggccc
atcatcaccgtgcacaagtccggcaccatctcggtaatgccgcaggcgcaggtggtcacc
accatgatcggaggcgtcaccaagaccatcaccctcgtcaagagccccctgtccgtggct
gggggcggcacactgctctccaatctgggctctctggtgacgctgatgcagactaagcct
gtgcagtctggggttgtcacttcgcaggcgagctctctcgcccacttcattcagaccaag
ggcaccctgcctccgggcgctaccatcgtgaagctggtgacatcggcggacggcaagcct
gccacgctcatcaccacctcgcaggcgggtggcatgactggcacggcacagatcctcaac
atcggtgccatggccggccacacgggcaccgtcatgggcaagcccggcggtgccaccatc
atcaagaccatcccaatgtcggcgctcatgggccaagctggggctacaggtggaactcaa
gcaggtggaatgaagtcccccatcacttacatcaccactaaggtcatgacctctggaacc
ggagctccaggaaagattatcacagccatgcctaaactaggcagcacccagtccggagtc
acacaggtgctgctgcgtgggacaggccctgccggtaccatcctgcgcgccgttactccc
atgtcggccgccaccatgatgggaggggtgcgtctggtttcccctgcaaccgtcactgca
gggaagcctgcccttaccacactggtcgtcaagggcaccacaggcatgacgacactgggc
acagttaccggtgccctcagcacacagactgcggctggcgtgacgtgcgtcccggccgca
ctggcgacgcctgtcacgacgctggccaccatcgccgccctctcatctcaggtggctggc
gtggcggggccgtcggcacccaacgtaaccctcacccatgtcaccagcaccacggccgtg
cctgccacatctatcaaccagccggtgatgttggcacagcagcttgtcaagccacagacc
gtggctgtgtcagttgtccccgttgcccagcccccagcagaggtggttgcaccgcccgag
tgcaaaagcccgccgcacgagacgtcggagaccaacaccaccaacacgtcaaccacaacc
acagccagcatggaccccaaccaggttcagcctccccctacgggcgagggtggtattccg
gagagcgtgcacggggagaccgccacagccggcaccaccaacacggccaccaacaccgtg
tcagccgcccagccccgcgccgtcaccaacgtcacgcagtcaacgcccgccccggggccc
gccatctcgagcgttgcatcgttacacctgcagacgatcgcatccacttcggaccaagcg
gccagttcagagactgcagccaccacctccaacagcggtggtggtgggggggcggcagca
gtagcatccacagtttcggcgacaacaacaatagcgacagcagcgacggcaacggtgaca
gtagcagcagcagtcgcgatcccaccagcaccaaaggcaggcgaggccgccccccaaccc
gcacagacggtgaacactgccgtgaatccaccggcaagcactaatgtggccccggcgcca
gcaaccgtagcagcagtagtagtagctccaccacagcccccttcatcctcggcaccatca
gcccctgctgctgctgctgccgccaccgccatcaccatgactgcaaccactgccactgtg
gccatcaaggtggccgtcccggcaccgctccccacgaccaccatcatcctgcccccgaca
aacgcggcaccagcgtcggtcagcacccccgcgtgcctgtccagcgccgagacggcaacc
gtcgtccttcagccagcgtcgcacgcaggttcgctactgccctccaagatcgaacctcta
gcgccatcagatgcgctggccccagctgacagcctcaacgaccccgctccggagtcgaac
cacttcccagtgcttgcaggccttgctccgtccagcacacttctcaccgctccggtgccc
accgtcgtgcccatcctgcccaccgtgcccatcctgcccacagtcgtgcccatcctaccc
accgtgcccatcttacccaccatacccatcgtgtccaccgtgcccgcgagccccgccaag
ctgcaggcggccaccgtgctggcccaggtggcaaacaacgtcccgtcaagtcctactatt
atcactatagcgaagccggaggtggttgaggctgcgcctaaaccgctcgccaagaaggag
tctgcgccctggtttgacgtgggcatcttcaaagtgaccaacaccgtggtgactcgctac
cacctgcctcctgacgacagcagcatggaggacggtgacgcttcgagtggcatccttgac
cacagctctctcaagctgcagtcactgcagcccggcacggcctacaagttccgcgtggcc
ggcgtcaacgccctcggtcgcggttccttcagcgagatttccgccttcaagacctgcctg
ccgggcttccccggggcgccctccgctatcaaaatcagcaagaccccggagggagcgcac
ctgacgtgggagccgccggccctgaagttcggccgaatcctcgaatacgctgtctacctg
gcggtgaagcggcccaaccagccccctgcgcaagcggccggcgacggcaagaccggcgcc
ccggccgccgcagcccagctcgcgtttgcgcgcgtgtactgcggcgccgagccgtcgtgc
ctcgtggcaaacgccagcctggccggcgctcacctcgacacgggagccaagcccgccatc
atcttccgcatctcggcgcgcaaccagaaaggctatggccccgccacacaagtgcggtgg
ctgcaagatgctggcaaagatgccccaggaagcaagccgatggcaaagcgacccatcaca
tcgccagaaaccaaaaccccgatgggcttgaagaaacccaaacaggaagctgtgtaa
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