Lethenteron reissneri (Far Eastern brook lamprey): 133351857
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Entry
133351857 CDS
T09663
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133351857 (TRMT13)
Enzymes [BR:
lrj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
133351857 (TRMT13)
Transfer RNA biogenesis [BR:
lrj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
133351857 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
133351857
NCBI-ProteinID:
XP_061423410
LinkDB
All DBs
Position
39:complement(639486..655761)
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AA seq
633 aa
AA seq
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MEVAVAAADGGDAGLPSPAPGCCAFFVERKRRYCKMSVAAGRALCGEHAACSGTSAPVAN
ERRRIVCPLDSKHTVYEDVLGKHLKKCNAREKPKPAYYVRDINCGENDELPSKEQVALSS
LSAEEMSALISKVQGVFQGAEAALELRVLSHPALQQELTDPSNGKSALKHLQQQASIVGH
LSSLGLLGADRCYVEFGAGRGKLSHWVRRALPSATRGISFLLVERCSTRFKVDGKHQEGD
VDFRRLLIDIQHLHLGNRASLFRCHSSRIRGRPWWPSGSICVERQQTWPCAALWRRYRGT
APGVQRQGSPPRQGSPPLQGSPPRQGSPPRQGSPPLQGSPPRQGSPPRQGCSPRQGSPPR
QGSPPRQGSPPRQGSPPRQGSPRVGRRRPPARPMWAPPHWASPSRCAATTAAAGRPTSGR
SIFALRAWAQRSLTSSKGCPAGRPVAGGDRRTRRTKCRTTDVEMKMPQEKGARADKTEWS
GMRRRRWRPWIMLHLVRQKIKSATAGAERSGSSWAGCASGCWTRAECATCASGASQPGCS
ATWRPPPPWKTCSSLPALPPEATGPRRLERLAPSVCRADAWRLGRQENVSWAASVGRHPH
LPWNRHRAQKYVYVRMLISTVGKTKKSLSVQCC
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggcggtggcggccgcggatggcggagacgcagggctcccgagccccgcgccc
gggtgctgcgcgttcttcgtggagaggaagcgacgctactgcaagatgagcgtggccgcg
ggcagggcgttgtgcggggagcacgccgcctgctcgggcacgagcgcgccggtggctaat
gagaggagacgaatcgtctgtccacttgattcaaagcatacagtttatgaagatgttttg
ggaaaacacctgaagaaatgtaacgcaagggaaaaaccaaaaccggcttactacgtgcga
gatatcaactgtggagaaaacgatgaactgccttcaaaagaacaggtcgcgttatcctcg
ctgtcagcagaagaaatgtcagcgctaataagcaaagtacaaggtgtatttcaaggcgca
gaggcggcgctggagcttcgtgtcctgtcccacccagccctgcagcaggagctgacagat
cccagcaatggaaagtcagccctcaaacatctccagcagcaggcatccatagtgggccac
ctgtcgagcctgggcctgctgggagccgaccgctgctacgtggagtttggcgccgggcgg
gggaagctgtcccactgggtgcggcgcgccctgccgagcgccacgcgcggcatctccttc
ctgctcgtggagaggtgcagcacgcgcttcaaggtggacgggaagcatcaggaaggggac
gtggatttccgtcgcctgctgatagacattcagcacctccaccttggtaatagagccagt
ctcttcaggtgccacagctccaggataaggggacgtccgtggtggccatcgggaagcatc
tgtgtggagcggcaacagacctggccctgcgctgccttgtggagacgctaccgcggcacg
gcacccggagtgcagcgccagggctctcctccgcgccagggctctcctccgctccagggc
tctcctccgcgccagggctctcctccgcgccagggctctcctccgctccagggctctcct
ccgcgccagggctctcctccgcgccagggctgttctccgcgccaaggctctcctccgcgc
cagggctctcctccgcgccagggctctcctccgcgccagggctctcctccgcgccagggc
tctccgcgtgtggggaggaggcggccccctgcgagaccgatgtgggcccccccgcactgg
gcatcgccatcgcgctgtgctgccaccaccgctgcagctggccggcctacgtcgggaaga
agtatttttgctctcagggcctgggcccaaaggagtttgacctcatccaaaggatgtcca
gctgggcgacctgtggctggaggagaccgacggactcgacggaccaagtgccggacaacg
gacgtggaaatgaaaatgccacaagagaagggagcgcgagcagacaagacggagtggagt
ggcatgcggaggaggagatggaggccatggatcatgctgcaccttgtcaggcagaagatc
aaatcagcgacggccggagccgagcggagcgggagcagctgggccggctgtgcaagcggc
tgctggacgagggccgagtgcgctacctgcgcgagtggggcctcgcagcccggctgcagc
gctacgtggaggccgccaccaccgtggaaaacgtgctcctcactgcccgctctgcctcct
gaagccaccgggccgcgccgtctggagaggcttgcgccaagcgtgtgccgagctgatgct
tggcgtctagggcgccaagagaacgtgtcttgggcggcatcagtaggaagacatcctcat
ctaccatggaatcgccaccgtgcccagaagtatgtatatgtacgtatgttgatttcaact
gtagggaaaacgaagaagagcctgagtgtacagtgctgttag
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