Lethenteron reissneri (Far Eastern brook lamprey): 133351953
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Entry
133351953 CDS
T09663
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133351953 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133351953 (PRPF38A)
Spliceosome [BR:
lrj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133351953 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
133351953 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
133351953
NCBI-ProteinID:
XP_061423560
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All DBs
Position
39:complement(11774835..11786351)
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AA seq
314 aa
AA seq
DB search
MANRTVKDAHSIRGTNPQYLVEKIIRTRIYESKYWKEECFALTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLVLKMLQIQPEKDIVVEFIRNEDFKYVRLLGAMYMRLTGTPMDCYKYL
EPLYNDYRKIKRQARSGEFEMIHVDEFIDELLREERVCDIILPRLQKRFVLEVVEELEVR
VSALEEDLDGGESSDEDEDDEDHHEAKRVEVAPLQDVERRKHRDAERPRRTPSPRFRRSK
TPPRRRSRSPKRRSLSPRRERHRSKSPPRRHRSRERERRHRSKSPGQHRSHRHRSHSRSP
DRSKRKSKRSHKGE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgctcacagcatccgcggcaccaacccgcagtacctg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggaatgcttc
gcgctcacggccgagctggtggtggacaaggcgatggagctgcgtttcgtgggcggagtg
tacgggggaaacataaagcccactccctttctgtgcctggtgctcaagatgttgcagatc
cagccagagaaagacatcgtggttgagttcatccgaaacgaggacttcaagtatgtgagg
cttctgggagccatgtacatgcggctgactggaacccccatggactgctacaagtatttg
gagccactctacaacgattacaggaagatcaaacgacaggcacggagcggtgaatttgaa
atgatccatgtggatgaattcatcgatgagctgctgagagaggagcgggtttgcgacatt
attctgcccaggctgcagaagcggtttgtgctggaggtggtggaggagctggaggtgcgg
gtgagcgccctggaagaggatctggatggaggagaatctagtgatgaagatgaagatgat
gaagaccaccatgaagctaagagggtggaggtggccccgctgcaagacgtggagcgccgg
aaacaccgcgacgccgagcggccacgacgcacgccctcgccgcggttccgccgcagcaag
acccctccacgcagacggagcagatcaccaaagaggagaagtttgtccccccggcgcgaa
cggcaccgcagcaagagccccccccggcggcaccgatcgcgtgagagggaacggcgtcac
cggtcaaagtcgcccggtcaacatcgcagccaccgccaccgtagccactcgcgctcacca
gatcggtccaagagaaagagcaagcgcagtcacaagggggagtga
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