Lethenteron reissneri (Far Eastern brook lamprey): 133352003
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Entry
133352003 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133352003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lrj04091
]
133352003
Lectins [BR:
lrj04091
]
C-Type lectins
Lecticans
133352003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
133352003
NCBI-ProteinID:
XP_061423666
LinkDB
All DBs
Position
39:complement(8768646..8830470)
Genome browser
AA seq
2288 aa
AA seq
DB search
MKLAPWLPLLALLLGLALEPQPASASLVVVNRGLAVPRGGRALLTSQELRVEETAAASGD
ACRLEVVHNEPITQRAGKVAPHVFNCRWAPGEVSYTHHGTPLLDHDLVLLRLYRFSDSDT
QLELVRLLVTIAEPAPGTALLLPGPSPLRVASFMGTSGALDRSVLSLAPDAENPARGRSC
WIRVPSEETGLPAHGRLVAPHRDGAADADSGPDPEGGRGDTPHSFGAGDGGGELAPPPSP
GGERLSAVGAVLGRVPCERFLSMGLRYEHLSPPGPDVDYVPLVLEIRDGSRGQPHKVEHM
WLPVHIEGAVPNQPPHAAPMSSFILEVDQFILTPISVASLDAKDGETPRHDLVFNVTEPP
AEGFLTHLSDHTRPVTSFTWRDLNEMLVAYQPPNSSHAERRTYEAEFEVHDSYFARSAPL
MLHISIRNTETNAPRVSWNMGLDLLEGQSRAITWDRFQVVDNDDLAAVRILAVDGLQHGR
LSVRGGKGFSFSVRDLRDGAVRYHHDGSDGARDHVAFRVTDGRHSARHSFPVRVAPVDDT
PPALVVALALAACAGETVPVSPEVLRASDPDEPHDDGRVLFTVTAPPAAGRLLRKDEPGG
PGQPVERFLQRDLFDGLIFYEHRGGKELHDSFEFVLSDTHEPPNVSDKQTMTVHVTPVDN
EVPREVAGGVGRALAVRETELAVLTREMLRFSDADTPPQELLYVLVRPCRFVDGAGGSLD
AGKLVSMDSMTKATKDASVAEIRSFTQHAVNHMKVAYMPPMADVGPWPRSVEFAFTVTDR
HGGVAEGFTFNITVLPVDNQPPQLEVFPVHVDEGAWCALGEEALSVWDADSEAAALALLV
SRRPRHGELLLDGVALLEGDRFTAAHVRDLRLTYQHDSSETLEDDVVITATDGTNTAEGV
LHIQVSPVNDESPQLLAGLLPELPCPEGGAVPVTVAHLAARDADSATGRLLYLVARAPSL
GALTRAGVPTLRFTQGDVARGLIAYTHTGGEIGLHPVHDTVTLVLSDAEAGSRADGAGGD
DDDDGAEGGEPPPLPAHDSLPIHDLNITVTPVDNEAPSLTVGAVLLVEEAGRVRVSAEHL
TALDPDTPPERLLLVLVAPPRFGFVENTRPSPGHERSNAGISVGSFSLHDLLAGHVNYVQ
SRHERVEPTGDQLALHATDGERRSRDLVLHVLIAPANDEPPALVAHNITVLEGHSRELGP
SVIDAVDLDVPADALRFSVVAEPRHGILVCGARGADPTRRRRLTGTQQHDGAESHAGGDD
AVMTSFGMEQLKQGLALTYVHDGSESADDAFSVRVWDGAHAATATVNVRVQPVNDEPPRL
TRNAGAWVDWGESRVISSAELDSEDGDTGRDGVSFVLAGAPQQGSLQHKSDGGEWRELLA
GAAFSQEDVDENRVRYRHRAAPAPAAAALHDSFRFTLTDGDNAAPTSSFVVSIRDALKGD
IALRTGRVSVAARDSASLSADALLASDASGRPDELLFVVTAPPALGRLELASSPGVGAGR
FTQADVAAGAVRYVHTGPAGAARDSFSFLVSNGLRTKLGSVDIDVESRDVLPPTLERNGG
LRLAEGTLAAITSAALHLTDPDTAPQDLRYVVTEPPRHGALYLRGQLLAVDESGSPAFTQ
LDVDQSDVAYRHSGGPAHLDHFSFLVRDPTDQGVLLEGRLTPQPIVFSIQVEPLDRVAPR
VTLLSPPRSVESLRGGRYGIRITIRHLRATDHDDDAAGNDEDITFSIMRPPLYGYLENTA
NGDFIRGSFCQRELREKRVMYIVNPSLDVTEDSLEFRVSDRAGNTGETQTLQLEWARVQM
AEVSVRVCENVGTLAVRLLRSGCAQDSAFVGIKVRGLSAVVGKDFTHSSASLVQFDPGVT
SRTWNVAIKDDGLEEATERLRVYLHAPVNAVLGAQDSTLVAIADGTAGRCDTSHGGDLDD
GGDDDDDDAAAPLTIRMESLQPGYVSVRGDVPDFHEKLSGRGAGGGGGGAGGGGAGGGSW
HVPGQLDVAAGRPVVAAPRQTARLRAIGSGKVVPPSSVIRNKTDVMWTYHGLVPLRLEKE
AVGGAALSQASVSVRARQAPESLPFSPAAYPPQEPPVQADKPAPAPGPQDSQQQVFAEST
FPKHCTPELKDLMHFDANSNRLFKCDGITWRAWDPKHTEAVGRRCPSAWTLHGGRCFLLV
ASVSANWAEAERSCRQIHDGSLVSVRSREEMSWLWDFGSRQPFWIGLSDRQEEGSWQWSN
GDPVTFTNWRGGGRSERDAAPRGGGGGGRRRRPRGGAHGGCVLAQQRGKWARRGCRGGAS
LPYVCVRE
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggcaccgtggctcccgctgctggcgctgctgctggggttggcgctggagccc
cagccggcgagcgcctcgctggtcgtcgtgaaccggggcctggcggtgccgaggggcggc
cgggccctgctgacgagccaggagctgcgggtggaggagacggcggccgccagcggtgac
gcgtgccgcctggaggtggtgcacaacgagccgatcacgcagcgagctggcaaggtggcg
ccgcacgtgttcaactgccgctgggccccgggggaggtgagctacactcaccacggcact
ccgctgctggaccacgacctcgtactgctgcggctctaccgcttctcggactcggacacg
cagctggagctggtgcgcctgctcgtgaccatcgccgagccggcgccgggcaccgcgctg
ctcctgccgggcccctcgccgctccgcgtcgcgtcgttcatgggcacgagcggcgccctc
gatcgctccgtcctgtcgctggcgcccgacgccgagaacccggcgcgcggccgcagctgc
tggatccgcgtgccgagcgaggagaccggcctgccggcgcacggccgcctcgtcgcgccc
caccgcgacggggcggcggacgcggattccggtccggatccggagggcggccggggagac
acgccgcactccttcggcgccggcgacggcggcggagagttggcgccaccgccgtcgccg
ggcggcgagaggttgagcgcggtgggagcggtgctgggcagggtgccctgcgagcgcttc
ctgagcatggggctgcgttacgagcacctgagcccgccgggccccgacgtggactacgtg
cccctggtgctggagatccgggatggctcgcgcggccagccgcacaaggtggagcacatg
tggctgcccgtgcacatcgagggcgccgtgcccaaccagccgccgcacgccgcccccatg
tcgtccttcatcctggaggtggaccagttcatcctgacgcccatcagcgtcgcctcgctc
gacgccaaggacggcgagacgccgcgccacgacctggtgttcaacgtcaccgagccgccc
gccgagggcttcctcacccacctgagcgaccacacgcggcccgtcacctccttcacctgg
agggacctcaacgaaatgctcgtcgcgtaccagccgcccaactcgagccacgccgagcga
cgcacctacgaggcggagttcgaggttcacgactcatacttcgctcggagcgccccgctg
atgctccacatctccatccgcaacacggagaccaacgcgccccgcgtctcctggaacatg
ggcctggacctgctggaggggcagtcgcgggccatcacgtgggaccgcttccaggtggtg
gacaacgacgacttggccgctgtgcgcatcctcgccgtggacggcctgcagcacgggcgg
ctcagcgtgcgcggaggcaagggcttctcgttctcggtgcgcgacctgcgcgacggcgcc
gtgcgctaccaccacgacggcagcgacggcgcccgcgaccacgtggcgttccgcgtgacg
gacggccgccactctgcgcgccactccttccccgtgcgcgtggcgcccgtcgacgacacg
ccgccggcgctcgtcgtcgcgctggcgctcgccgcgtgcgccggagagacggtgcccgtc
tcgcccgaggtgctgcgcgccagcgaccccgacgagccgcacgacgacggcagggtgctc
ttcaccgtgacggcgccgcccgccgccgggcggctgctccgtaaggacgagccgggcggc
cccgggcagcccgtggagcggttcctgcagagggacctctttgacggcctcatcttctac
gagcaccgcggcggcaaggagctgcacgactccttcgagtttgtgctctcggacacacac
gagcctcccaacgtgtccgacaagcagaccatgacggtgcacgtgacgccggtggacaac
gaggtgccgcgtgaggtcgcgggcggcgtcgggcgcgccctggcggtgcgcgagacggag
ctggcggtgctgacacgggagatgctgcggttcagcgacgccgacacgcccccacaagag
ctgctctacgtcctcgtgcggccctgccgattcgtggacggcgccggcggatccctggac
gccgggaagctcgtgtcaatggacagcatgaccaaggcgacgaaagacgcttcggtggct
gagatccgctccttcacacagcacgccgtgaaccacatgaaggtggcgtacatgccgccc
atggccgacgtggggccctggccgcggtccgtggagtttgccttcaccgtcaccgaccgg
cacggcggcgtggccgagggcttcacgttcaacatcaccgtgctgcccgtggacaaccag
ccgccacagctggaggtgttccccgtgcacgtggacgagggcgcgtggtgcgccctgggg
gaggaggcgctctccgtgtgggacgccgactcggaggcggcggcgctggcgctgctcgtg
tcgcgccgcccgcgccacggggagctgctgctcgacggcgtcgcgctgctcgagggcgac
cgcttcacggcggcgcacgtacgggacctgcggctcacttatcagcacgacagctcggag
acgctggaggacgacgtcgtgatcacggccaccgatggcaccaacaccgcagagggagtc
cttcacattcaggtctcccccgtcaatgacgagtccccccagctgctggccgggctgctc
cccgagctgccgtgccccgaggggggcgcggtgcccgtgacggtggcccacctggcggcg
cgcgacgccgacagcgcgacgggccgcctcctctacctggtggcgcgggcgccgtcgctc
ggcgcgctcacgcgggccggcgtgcccacgctgcgcttcacgcagggggacgtcgcgcgg
gggctcatcgcgtacactcacacgggaggggaaatcggactgcatcccgtccacgacacg
gtgacgctggtgctgtccgacgccgaggctggcagcagagcggacggcgccggcggcgac
gacgacgacgacggtgcagagggaggcgagccgcccccgctccccgctcacgactcgctg
cccatccacgacctcaacatcaccgtgacgcccgtcgacaacgaagcgccgtcgctcacc
gtgggcgcggtgctactggtagaggaggcgggccgcgtccgcgtgtcggcggagcacctg
acggcgctggaccccgacacgccgccagagcggctgctgctcgtgctggtggcgccgccg
cgcttcggcttcgtggagaacacgcggccgtcgcccggccacgagcgcagcaacgccggc
atcagcgtcggctcgttctcgctgcacgacctgctggcgggccacgtgaactacgtgcag
tcgcgccacgagcgcgtggaacccacgggcgaccagctggcgctgcacgcgacggacggc
gagcggcgctcacgcgacctcgtcctgcacgtgctcatcgcgcccgccaacgacgagccg
cccgccctcgtcgcgcacaacatcacggtgctggagggacacagcagggagctgggaccg
tcggtcatcgacgccgtcgatctggacgtccccgccgacgccctccgcttctccgtggtg
gcggagccccggcacgggatcctcgtgtgcggcgctcgtggcgccgaccccacgcggcgg
cgccggctcacggggacgcagcagcacgacggcgcggagagccacgccggcggcgatgac
gccgtgatgacgtcgttcggcatggagcagctcaagcaaggcctggcgctgacgtacgtc
cacgacggctcggagagcgccgacgacgcgttctcggtgcgcgtgtgggacggggcgcac
gccgccacggccaccgtcaacgtgcgcgtccagccggtcaacgacgagccaccgcgcctt
acgcggaacgccggggcgtgggtggattggggcgagagccgcgtgatttccagcgccgag
ttggactctgaggacggagacacgggacgcgacggcgtctcctttgtgctcgccggcgcg
ccccagcagggctcgctgcagcacaagtcggacgggggcgagtggcgtgagctcctcgcc
ggcgccgccttctcccaggaggacgtggacgaaaaccgcgtgcgctaccggcaccgcgcg
gcgccggcgccggcggcggcggcgctgcacgactcgttccgcttcacgctcactgacggg
gacaacgctgcccccacttcctccttcgtcgtctccattcgcgatgcgctcaagggtgac
atcgctttgcggacgggccgcgtgtcggtggcggcgcgcgactccgcgtcgctgtcggcc
gacgcgctgctcgcgagcgacgcctcgggccgccccgacgagctgctgttcgtggtgacg
gcgccgccggcgctcgggcgcctggagctggcgtcgagcccgggcgtcggcgcggggagg
ttcacgcaggcggacgtggcggcgggcgccgtgcgatacgtgcacacggggcccgcggga
gccgcgcgcgactcgttcagtttcctggtgagcaatggcctccgcacgaagctaggctcg
gtggacatcgacgtcgagtcccgggacgtcctgccgcccacgctggagcgcaacggcggc
ctgcgcctcgccgaggggacgctggcggccatcacgagcgccgccctccatctcaccgac
cccgacacggccccccaggacctccgctacgtcgtcacggagccccccagacacggcgcc
ctgtaccttcgaggacagctgctggcagtggacgaatcgggctcgccggcgttcacccag
ctcgacgtcgaccaatcggacgtggcgtaccggcactcgggaggacccgctcacctcgac
cacttctccttcctggttcgcgaccccaccgaccagggcgtcctattggagggacggctc
acgccacagccaatcgtcttcagcattcaggtggagcctctggaccgcgtggcaccgcgc
gtcacgctgctctctcccccgcgctccgtcgagtcgctccggggcggccgctacggaatc
cgcatcacgatccgtcacctccgtgccaccgaccacgacgacgacgccgccggcaacgac
gaggacatcactttctccatcatgcggccgcccctctacggatacttggagaacaccgcc
aatggtgacttcatccgcgggagcttctgccagcgagagctgagagagaagcgcgtgatg
tacatcgtcaacccctcgctggacgtcacggaggacagcctggagttccgcgtgtccgac
agagccggcaacacgggggagacgcagaccctgcagctggagtgggcgcgtgtgcagatg
gcggaggtgtcggtgcgcgtatgcgagaacgtcggcacgctggcggtgaggttgctgcgt
agtggctgtgcccaggactcggcgttcgtcggaatcaaggtgcgagggttatcagctgtt
gtcggcaaggacttcacgcacagctcggcctctctcgtgcagttcgatccaggcgtcact
tccaggacgtggaacgtggcgataaaggacgacgggctggaggaggccacggagcggctg
cgtgtttatctgcacgcgcccgtcaacgccgtgctgggcgcgcaggacagcacgctcgtc
gcgatagccgatgggacggccggccgctgcgacacatcgcacggcggggatttggacgac
ggcggcgacgacgacgacgacgacgctgccgctccgctcacgatccgcatggagtcgctg
cagcccggctacgtgtcggtgcgcggtgacgtgccggacttccacgagaagctgtccggt
cgtggcgccggcggtggaggaggaggagctgggggaggaggagctgggggaggatcgtgg
cacgtgccaggccaactcgacgtggcggccgggagaccggttgttgccgcaccccggcag
acggcacggctgcgcgccatcggctcgggcaaagtggtgcctccgtcctccgtcatcagg
aacaagacggacgtcatgtggacgtaccacggcctcgtgccgctacgtctggagaaggaa
gcggttggcggcgcggcgctatcgcaggcgagcgtgtcggtgcgggcccgccaggctccc
gagagcctccctttctcgcccgctgcctacccgccacaagagccgcctgttcaggcagac
aaaccagcaccggccccaggcccgcaagactcccagcaacaggtgttcgctgaatccacc
tttcccaagcattgtaccccggaactgaaagatctcatgcactttgacgcgaacagcaat
cggctgttcaagtgcgatgggattacgtggcgtgcctgggaccccaagcacacggaggcg
gtggggcggcggtgcccgtcggcgtggacgctccacgggggacgctgcttcctgctcgtg
gcctccgtgtccgccaactgggccgaggccgagcggagctgccggcagattcacgacggc
tccctggtgagcgtgcggtcccgggaggagatgtcctggctctgggactttggcagccgc
cagccattctggatcggcctgagcgaccggcaggaggagggcagctggcagtggagcaac
ggcgacccggtcaccttcaccaactggcgagggggcggccgctccgaacgcgacgcggcc
ccacgcgggggcggcggcggcgggcggcgtcggaggccccgcgggggggcccacggcggc
tgcgtcctggcccagcagagggggaagtgggccaggcgggggtgcagggggggcgcgtcg
ctcccctacgtgtgcgtgcgagaatga
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