Lethenteron reissneri (Far Eastern brook lamprey): 133352064
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Entry
133352064 CDS
T09663
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133352064
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
133352064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
SGL
EGF
AJAP1_PANP_C
TMEM154
Motif
Other DBs
NCBI-GeneID:
133352064
NCBI-ProteinID:
XP_061423783
LinkDB
All DBs
Position
39:12008259..12034742
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AA seq
926 aa
AA seq
DB search
MNQRSLLLSLGLVALLAASLASGEFARCDPSRFQCRNGRCVPEAWRCDGGNDCGDGSDET
GCGPCRKDQFSCADGMCINRRWRCDGRPDCPDSSDESPAECGLRSCASDEFDCGRNVTSQ
RCIQHSWVCDGDRDCESGEDEQGCAPVVCAEHEVTCRSGKCVDEKFACDGDDDCGDGTDE
EGCPTVPPCAAGSLACPSDPAVCVPPMLQCDGHADCPGGEDEADERCPGEGRLDPSCRSN
AFRCRSGHCVHEGWRCDGDPDCDDGSDEEGCKVEACSANQLRCTDGSCVPGSSQCDGFRD
CHDGSDEHDCNNTAVDCTGPGWFRCRSGECLQDRQVCDGTRDCHDWSDEPLSLCNVNECA
TTNGGCSHTCWDRPLGFECGCPAGYELLDEYTCGDTDECKQPGVCSQLCINYKGGYKCDC
YEGYTMDPATQACKATEHQKTYLIFANQRDVRRVDLHTRSYKQLISRTRNTVAVAVEITA
NRIYWSDLGQKQVYSALMDEAHDSTRHTSVLGEAPVFVEGIAIDWVHGNLYWTDSKAKTV
AVAKPDGSRRRTLFGQGLSEPRAIAVDPLSGFVYWSDWGQPAKIEKAGMNGVSRQVIVSK
DIEWPNGITLDLVNKRLYWVDSKLRTLSSVNLAGGERHEVMHQTDALHHPFAIAIFEDKV
YWADGEKEAIYSADKHTGSGISSVVEDLHSPQDLLVYHPLLQPNGTDWCSTAPLPNGGCA
YLCLPAPHITAGSPRFTCACPDGEFLANDGRGCSKDRPPVVVMTTGPKDVTSREPQRTSP
RPATASSSTTTTTTTTLSDRPAAVTTDDAARQHQRTSTAPATSPTATNSHMLARKEEAST
SVVPVALGITIPIVLLLLLAAGAAMLWRSWKRRSAKSIHFENPVYRKTTEEQEEEEREMS
FGMTRNGSVSSAHSYTPIVQVHVEED
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcggagcctcctcctctcgctcggcctcgtcgcgctgctcgccgcctccctc
gcctcgggcgagtttgctcgctgtgacccgtctcgcttccagtgccgcaatgggcgctgc
gtgcccgaggcgtggcgctgcgacggcggcaacgactgcggggacggcagcgacgagacg
ggatgcggaccttgcaggaaggatcagttcagttgcgccgatgggatgtgcatcaaccgc
aggtggcggtgcgacgggcggcccgactgccccgacagctcggacgagagcccagccgag
tgcggcttgcgctcttgcgcatctgatgagtttgactgcggtagaaacgtgacgtctcag
cgctgcatccagcacagctgggtgtgcgacggagaccgcgactgcgagagcggggaggac
gagcagggctgtgcccccgtggtgtgtgcagagcacgaggtcacgtgccgcagcggcaag
tgcgtggacgagaagttcgcgtgcgacggcgacgacgactgcggcgacggcacggacgag
gagggctgccccacggtgccgccgtgtgccgccggctcgctggcgtgcccgtccgacccg
gccgtgtgtgtgccgccgatgctgcagtgcgacgggcatgccgactgccccggcggtgag
gatgaggcggacgagcgctgccccggtgagggccgcctggatcccagctgcaggagcaat
gcgtttcgctgccgctcgggccactgcgtgcacgagggttggcgctgcgacggggacccc
gactgcgacgacgggtctgacgaggagggatgcaaggtggaggcttgcagtgcgaaccag
ctgcgctgcacggatgggtcgtgcgtgcccggtagcagccagtgcgacggcttcagggac
tgccacgatggctccgacgaacacgactgcaacaacacagccgtggactgcacgggcccc
ggctggttccgctgccgctctggcgagtgcctgcaggaccgtcaagtgtgcgacgggacg
agagactgccacgactggtcggacgagccgctcagcctgtgcaatgtgaacgagtgcgcc
accaccaacggaggctgctcgcacacatgctgggaccggccgctaggcttcgagtgtggc
tgccccgcgggatacgaactcctggacgagtacacgtgcggagacacggacgagtgcaag
cagcccggcgtttgcagccagctgtgcatcaactataagggcggatacaagtgcgattgc
tacgagggatacaccatggaccccgccacgcaggcctgcaaggccactgagcaccaaaag
acctacctgatcttcgcaaaccagcgtgacgtgcgccgcgtagacctgcacacgcgcagc
tacaagcagctcatctcgcgcacgcgcaacactgtcgccgtagccgtcgagatcacggcc
aaccgcatctactggtccgacctgggccagaagcaagtttacagcgcactaatggatgag
gcgcatgattccacgcgccacaccagcgtgctgggcgaggcgcctgtctttgttgagggc
atcgccatcgactgggtgcacgggaacctctactggaccgactcgaaagccaaaaccgtt
gccgtggccaaacccgacggctcccggcgccgcacgctcttcggtcaagggttgagcgag
ccccgtgccatcgccgtagacccgctgagcgggttcgtctactggtccgactggggtcag
ccggctaagatcgagaaggccggcatgaacggcgtaagccgccaggtcatcgtgtcgaag
gacatcgagtggcccaacggcatcacgctcgacctggtgaacaagcgtctgtactgggtg
gactcaaagctgcgcacgctgtccagcgtgaacctggccgggggcgagaggcacgaggtg
atgcaccagacggacgcgctccaccaccccttcgccatcgccatcttcgaggacaaggtg
tattgggctgacggggagaaggaagccatctacagtgctgacaagcacacggggagcgga
atttcctccgtggtggaggacctgcacagcccccaggacctgctcgtttaccaccccctg
ctgcagccaaacggcacggactggtgcagcacagcgccgctcccgaacggcggctgcgca
tacctgtgcctgccggcgccgcacatcaccgccgggtcgccgcggttcacgtgcgcgtgc
cctgatggggagttcctcgcaaacgacggccgcggttgcagcaaagaccgcccccctgtc
gtcgtgatgacaaccggaccgaaggacgtcacgagtcgggagccacagcggacgagccca
cggcccgcgaccgcctcgtcctccaccacgaccaccacgaccaccacgctctcagaccgc
ccggctgccgtgacgacggatgacgcggctcggcagcaccagcggacgagcacggcgccc
gcgacctcccccaccgcgaccaactcccatatgctggctcgcaaggaggaggcctcaacg
tctgtggtgcccgtggcactggggatcaccatccctattgtgctgctgctgctgttggca
gcaggtgcagcgatgctgtggcgtagctggaagcggcgtagtgccaaaagcattcacttt
gagaacccggtttaccgcaaaaccacggaggagcaggaggaggaggagcgagagatgagc
tttggcatgactcgcaacggctccgtgagcagcgcccactcctacacgccgattgtgcag
gtccacgtagaagaggactag
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