Lethenteron reissneri (Far Eastern brook lamprey): 133352590
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Entry
133352590 CDS
T09663
Symbol
VPS54
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133352590 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133352590 (VPS54)
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133352590 (VPS54)
Membrane trafficking [BR:
lrj04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
133352590 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
133352590
NCBI-ProteinID:
XP_061424314
LinkDB
All DBs
Position
41:complement(4596521..4620628)
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AA seq
1005 aa
AA seq
DB search
MASGRQGXPSSTATPASAALARGRAAEELGKGGVVTAAAAARAKALHPSRSLPDVCPNDS
SVPRVQDGLREARDGPSVVTDQHKWTVYHSKVNLPAALNDPRRAKRESDFFTKTWGLEFT
EVPVQPSPHLPEVTREDFEKYLSSTSKCYAVHQKCQATCPQKDEVDRVLDAVSCTHGKQQ
SDLEQVPKMFLKPDFALEDPATFNTVLPWSQFGGAQKRVGARNAPAVPDGFSSRLLQEKL
SHYLDVVEVNLARQISLRSDAFFQAMESQRDVQEHLRRAALTVRSLRSLVGRVDTVLASG
SLRVLRLATARRNAALLHGKLKLMAAVQQTQPTVQLLLSTAEYSGALDLIATTQEVLQQE
LQGVHSFRHLGSQLCELEKLIDKMMVEEICRYAEVDLNRTLQEGEAVLEEERLVSLVFGL
LRQRRLDFLDMYNDRIVMAVRNIVKQTVMEAISQVDEIDTEIVTKLADQIRLMIFPLWLE
LLQKVFSNLLVFLRRVKATLGVMRDVVHMALERAYERARELEERTRPPPRGPSQRSHNAA
ERSDLPVLECRPGGELPNVGQQEDAAGGGDTPSSGSASDTEQTTDSSASCDKALASSKAH
EGLQLQLLGEELRLSVLELERVSSSVQELLHSTSDCCHDRCVKFIMARARQDGSLERLSP
AEFVALSQAVEGFVAVSEEISGRKSTSLRGALQSQASRFVQRFHEERRTKLSLLLDNERW
KQAEVPAEFQQLVDSMAGGVIALSERKPAASQNKKLADYLFVDGQKYTVVSTVLLLIRMV
LEYCQCVEDIPSVTTDMLPRLTDLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASR
CLQLILQYIPLIRAHFEARLQPKQYNMLRHFDHMTKDYSDHIGEISAKLVAIMDSMCEKL
LFRYEVKAPVPSACFRNVSKQMAKMHEAVCELLPNEQVQLLFLRINACFKQHLKGQLSRL
GVVSDGGPQHGLVTSDLAFYVGNLRGLNGLEQLDLNLTEIWEQKR
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggccagcggcaggcaaggcnncccctcgtcgacagctacaccggcgtcggcggcgttg
gcgcgcggcagggccgccgaggagcttggcaagggcggcgtcgtcaccgcagcagcagcg
gcccgcgccaaggcactccacccgagccgctcgcttccggatgtgtgccccaacgactct
tcggtgccacgtgtgcaagatgggttgcgggaggcccgggacgggccgagcgtggtgacg
gaccagcacaagtggacggtgtaccactcgaaggtgaacctaccggcggcgctcaacgac
ccgcggagggccaagcgcgagtccgacttcttcaccaagacgtggggcctcgagttcacc
gaggtgcctgtccagccgtcgccccacctgccggaggtgacgcgcgaggactttgagaag
tacctgagcagcaccagcaagtgttacgcagtccaccagaagtgccaggctacatgtccg
cagaaggacgaagtggatcgggtccttgatgctgtcagttgcacgcacggcaaacagcaa
agtgatctggaacaagtgcctaaaatgtttctgaagccagactttgccctggaggatccg
gccacgttcaacacggtgctgccctggtcacagtttggcggcgcgcagaagcgcgtgggc
gccaggaacgccccagcggtgcccgacggattctcttcgcgcctcctgcaggagaagctg
agccactacctggacgtggtggaggtgaacctggcgcggcagatctcgcttcgctccgac
gccttcttccaggcaatggagtcccagcgcgacgtgcaggagcacctgcggcgagcggcg
ctcacagtgcgctcgctgcgctcccttgtgggccgcgtggacacggtgctggcgagcggc
tcgctgcgggtgctgcgcctcgcgacggcgcgacgcaacgccgcgttgctgcacggcaag
ctgaagctgatggcggccgtgcagcagacgcagcccaccgtgcagctgctgctgtcaacg
gccgagtacagcggcgccctcgacctcatcgccaccacgcaggaggtgctgcagcaggag
ctgcagggggtgcacagcttccggcacctcggctcccagctgtgcgagctggaaaagctc
atcgacaagatgatggtggaggagatctgcaggtatgccgaggtggacctcaacaggacc
ctacaggaaggggaggccgtgctggaggaggagcggctggtgtccctcgtgtttgggttg
ctgcgtcagcggaggttggacttcctggacatgtacaatgaccgcatcgtcatggccgtg
aggaacatcgtcaagcagactgtgatggaagcaatttctcaagttgatgaaattgacact
gaaatcgtgacaaagctggcagatcaaatacggttgatgatctttcctctctggctcgaa
ctcctccagaaggtcttctcgaaccttctcgtatttctacgtcgggtgaaggcaacgctg
ggcgtgatgcgggacgtggtgcacatggcgctggagcgcgcttacgagagggcccgcgag
ctggaggagaggacgcggcctcctccccgcggtccatcgcagcgcagccacaacgccgcc
gaacgctcggacctccccgtgctggaatgcaggccgggcggcgagctccccaatgttggc
cagcaggaggacgctgctggcggaggtgacacgccgtcgagtggctctgcgtccgacacc
gagcagacgacggactcctcggccagctgtgacaaggccttggcttcctcgaaggctcac
gagggccttcagctgcagcttttgggggaggagctgcgactcagcgtgctggagttggag
cgagtgtccagcagcgtccaggagctgctgcacagcacctcggactgctgccacgaccgc
tgcgtcaagttcatcatggccagggcacgccaggacggatcgctcgagaggctgagcccc
gcggagttcgtggccctctcgcaggccgtggaggggttcgtggccgtatcggaggagatc
tcgggccgcaagagcacctcactgcggggggcgttgcagagccaggcgagccgcttcgtg
cagcgcttccacgaggagcggagaacaaaattgagcttgctgctcgataacgagcgatgg
aagcaggcggaagtccccgcggagtttcagcagctcgtcgactcgatggccggaggagtg
atcgcgttgtcggagagaaagcccgcagcatcacaaaacaagaagctggctgactacctc
tttgtggacgggcagaagtacacggtggttagcaccgtgctgctgttgatccgcatggtg
ctggagtactgccagtgtgtggaggatatcccgtccgtcaccacggacatgctgcccagg
ctcacagacctcctgaagcacttcaactctcgcagctgtcagctcgtgctgggcgctggg
gccttgcaggtggtcggcttgaagaccatcaccaccaaaaacctcgcgctggcatcgcgc
tgcctgcagctcatcctgcagtacatcccgctcatccgcgcacacttcgaggcccgcctc
cagcccaagcagtacaacatgctgcgacactttgaccacatgaccaaggattacagcgac
cacataggggagatttccgccaaattggtcgcgataatggacagcatgtgcgagaagctg
ctattcagatacgaggtaaaggcgcccgtgccgtcggcgtgcttccgcaacgtgagcaag
cagatggccaagatgcacgaggccgtgtgtgagctgctgccaaacgagcaggtgcagttg
ctcttcctgcggatcaacgcctgcttcaaacagcacctcaaggggcagctgtcccgtctc
ggcgtcgtgagcgacgggggaccgcagcacgggctggtgacatccgacctggcgttctac
gtggggaatctgcgtgggctgaatggcttggagcagctggacctcaatctgactgagatc
tgggagcagaagaggtga
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