Lethenteron reissneri (Far Eastern brook lamprey): 133352616
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Entry
133352616 CDS
T09663
Symbol
BRF1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133352616 (BRF1)
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
133352616 (BRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
133352616
NCBI-ProteinID:
XP_061424353
LinkDB
All DBs
Position
41:complement(5266020..5282395)
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AA seq
730 aa
AA seq
DB search
MAGGKVCQNCGCSDIETDSARGDAVCTACGSVLEDNIIVSEVQFQEGGGGASSVVGQFVS
SEGLGKAPSFGTGLYTGLGKESRALTLQNGRRHITQLGSQLQLNQHCLDTAFNFFKMAVS
KRLTRGRKMTHVVAACLYLVCRTESTPHMLLDFSDLLQVNVYVLGKTFLLLARSLCINAP
AIDPCLYIPRFAHMLEFGDKTHEVSMTAMRLVARMKRDWMHTGRRPSGLCGAALLVASRM
HDFRRTVKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMRIDLEAECDPPSFISGKR
KAKVQQMDLEVSKQELDEYEEEISSFQQEIETELESRRPKLRGLYASLLKEVCSDSKDDL
MPDLEEDKEGAGQDGQDEDDLVLMDANLPLGTDDIESEIRSDREPSEPPRDSPCPPRSPA
VWRSPGLEVDNSLRAVLGPLPTAASLGLKESIEECMAINEAEPLAEEEDGDLDLTDIDDL
EIEAYLLSKQEIDIKTELWMKENAAFLQEQQEKADREAKEKELGIYKEKKPKKSGKRREP
IRASTAGEAIEKMLAQKRISSKINYEVLKDLNNKGGGSAASTPRRDDTAATTAVPASPRP
ESRDRMRLTSINSLGKRIKPLLSSQSAKKLVLDKTASVRKEPPAVPALGGPALALTEASG
PARVADPAHVAAAAVVVESGPVRFQADEEAAAAAEEEEEDEEEEPCVSALALMGQADYGC
DDDEEFDDAY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggccggtggcaaggtttgccagaactgcggctgcagtgacatcgagacagactcggct
cgcggggatgctgtctgcacggcttgtggctcggtgcttgaggacaacatcatcgtgtcc
gaggtgcaattccaggagggcggtggaggagcgtcgtcggttgtcgggcagttcgtctca
tcggaaggtctaggcaaagcaccctcatttggcacaggtctctacactggccttggaaaa
gagtctcgtgcacttacgctacagaatggtcggaggcacataacccagctgggtagccag
ctgcagctgaatcaacactgcctggacacggcgttcaacttcttcaagatggcagtgagc
aagcggcttacgcgtggtcgcaagatgacccacgtggtggcagcttgcttgtatctggtg
tgccgcacagagagcacaccacatatgttgctggatttcagtgacctcttacaagtaaat
gtttatgtacttggaaaaacattccttcttttggcaagatccctgtgcatcaatgccccg
gcgatagacccttgcctgtacattccgcggtttgcccacatgctggagtttggagacaag
acgcacgaggtgtccatgacggccatgcgcctggtggcgcgaatgaaacgcgactggatg
cacacaggacgccgcccctcaggcctctgcggagccgcattgctggtcgcatcacgcatg
catgacttcagacggaccgtaaaggaagtaattcgcgtggtgaaagtgtgtgagtcgacc
ttaaggaaaaggctcacagagtttgaggatacgcccacaagccagctgacgatcgatgag
ttcatgcgcattgacttggaggcggagtgcgacccaccctcattcatcagcggcaaacgc
aaggccaaagtgcagcagatggacctggaagtatcaaagcaagaactcgatgaatatgaa
gaggagatcagctctttccagcaggagattgagaccgagcttgaatcgcggaggcccaag
ctgagaggactttatgccagcttgctcaaggaagtgtgcagcgacagcaaggacgacttg
atgcctgacctcgaggaggacaaagagggcgccggtcaggatggtcaggacgaggatgat
ctcgtgctgatggacgccaacttgccgctgggcacggacgacatcgagtcggagatacgc
agcgaccgcgagccctcggagccgccgagagactcgccgtgtccaccgcgcagccccgcg
gtgtggcgctcgcccggcctggaggtggacaacagcctgcgtgcggtgctggggcccttg
cccaccgctgccagcctgggcctcaaggagtccatcgaggagtgcatggccatcaatgag
gcagagccacttgcggaggaggaagatggggacctggacctcaccgacattgatgacttg
gaaattgaagcttaccttttaagcaagcaagaaattgacatcaaaacagaactctggatg
aaagagaatgcagcatttctccaggaacaacaagaaaaagctgaccgagaagccaaagag
aaggaacttggcatatacaaggagaagaagcccaagaagtcgggcaagaggcgagagccg
atccgggccagcacggcaggagaggccatcgagaagatgctggcccagaagaggatctcc
agcaagatcaactacgaggtgctcaaggacctgaacaacaaagggggcggctcagcggct
tcgacgccgcgtcgcgatgacactgcggccaccacggccgtaccggcatcgccgcgtccc
gagtcccgggaccgcatgaggctgacctcgatcaactccctgggcaagaggataaagcct
ctattgtcatctcagtcggccaagaagttagtcctggacaagactgccagcgtgcgcaaa
gaaccaccggccgtcccagcactgggaggtcctgccctggccctgacggaagcctcggga
ccggcaagagtcgcggatccagctcacgtggcggcggcggcggtggtggtggagagcggg
cccgttcgcttccaggctgacgaggaggcggcggcggcggcggaggaggaagaggaggat
gaggaggaggagccgtgcgtcagcgcgctcgcgctcatgggacaggctgactacggttgc
gatgacgatgaagaatttgacgacgcctactga
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