Lethenteron reissneri (Far Eastern brook lamprey): 133352722
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Entry
133352722 CDS
T09663
Name
(RefSeq) poly(A) polymerase beta-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133352722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133352722
Enzymes [BR:
lrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
133352722
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
133352722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
133352722
NCBI-ProteinID:
XP_061424531
LinkDB
All DBs
Position
41:complement(409827..433938)
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AA seq
749 aa
AA seq
DB search
MQGSQSSQSGRQHGITSPISLAEPREADRVLTRHLMNTLLPFGVFEEEEELNHRMVVLGK
LNNLAKAWVREVGESKNLPPAILENGGGKIFTFGSYRLGVHTKGADIDALCVSPRHVERI
DFFSTFIEMLKNQEGVKDLRSVEDAFVPVIKLTFDHIEIDVLFARLALQVIPDNLNLRDN
ALLKNLDIRCIRSLNGCRVTDEILHLVPNVEHFRMTLRAIKLWAKRRGIYSNMLGFLGGV
SWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPKPVLLKQPEECNLNLPVWDPRVNPT
DRYHVMPIITPAYPHQNSTYNVTMSTRTVMVEEFKQGLAITDEILMGKAEWSKLFESPNF
FLKYKHYIVLTASALTEEQHLEWVGLVESKIRILVGNLERNEYITLAHINPQSYPGPKDN
PDKQGVTTVWFIGIIFKKLENPENVNVDLTLDIQSFTDTVYRQAAHISMLKEGMQIEAIH
VKKKQLSQFLPGDVLQKKKKENGRSGSARTSLNSSSVLDSSRDSDCSFSSPTIIRVLNSD
SNQPSSPVTGENGSVSSPSASPPVAADDKSPSPRTPSPENPSMPVAGNAIPVISTRPLHA
ASVPSGTVVRVVTPTRLVNTPPPATGAAATAGHPTPPQGVKRPQSPGSKTSPPKRHKSPP
SEAAPAGDSDMDTDSQPLKNSDTGNAVTKTGASEDSDILELQEETTPIQTTDVQTETQKQ
ASNELSDGSAPVPTAVKVVKNSIRLKLNR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcagggatctcagtcttcccagtcagggaggcagcatggcatcacatcgcccatcagc
ctggcagagccacgcgaagccgaccgtgttctcacacgacacctcatgaatactcttctg
ccatttggggtctttgaagaggaggaggaacttaaccaccggatggttgtcttgggaaaa
ttaaataacttggcaaaagcatgggtccgagaagttggtgaaagcaagaatcttccacca
gcaattttggagaatggtgggggtaaaatatttacgtttgggtcctatcggctgggagtt
cacacaaaaggtgccgacattgacgctctgtgtgtttcgccgcgacacgtggaacgtatc
gacttcttctcgactttcatcgagatgttaaagaatcaggagggagtaaaagacctccgg
tctgtggaggatgcctttgtacctgtcatcaagcttacgtttgaccacattgagatcgac
gtgttgttcgcacggctggctctgcaggtgatccccgataacctaaacctccgtgacaac
gcactactcaaaaacctcgacatccgatgcatccgcagcctcaatggctgccgcgtgacg
gatgaaattttgcacctcgtgcccaacgtggaacacttccgcatgacgctgcgcgccatc
aagctctgggcaaaacgccgtgggatctactcgaatatgctgggcttcctgggtggcgtg
tcgtgggcaatgcttgtggcacgaacctgccagctctaccccaacgccatcgcctccacc
ctcgtgcacaagttcttccttgtcttctccaagtgggagtggcctaagcctgtccttctc
aaacagcccgaggaatgcaacctcaacctgcctgtgtgggacccacgggtgaacccaaca
gacaggtaccacgtgatgcccatcatcacacctgcgtaccctcaccagaactccacctac
aacgtcaccatgtccacacgcaccgtcatggtggaggagttcaagcaaggactcgccatc
accgatgaaattctgatgggcaaagcggaatggagtaagctgtttgagtcgccaaacttt
tttctcaagtacaagcattacatcgtactgacggcaagtgcactcacggaagaacagcac
ctcgagtgggtgggactcgtggagtcgaagatccgcatcctcgttggaaaccttgagcgc
aacgagtacatcactctggctcacatcaacccgcagtcctaccccggccccaaggacaac
ccggacaagcaaggcgtgacaacggtttggttcatcgggatcatcttcaaaaagttggag
aacccggagaatgtgaatgtggacctgacgctagacatccagtcattcaccgacacggtt
tacaggcaagctgcacacatcagcatgctcaaagagggcatgcagatcgaggccatccat
gtcaagaaaaagcagctcagccagtttctgcccggtgatgttcttcagaaaaagaaaaag
gagaacgggcgaagtggctcggcgcgcacctccctgaacagcagcagcgtgctcgactcg
tcgagggactccgactgcagcttctcgtcgcccaccatcatccgtgtcctcaactcggac
agcaaccagccatcctctccggtgaccggtgagaatggcagtgtctccagtccttcggcg
tcgccccccgtggcggccgacgacaagtcgccctcgcctcggacgccgtcgccagaaaac
cccagcatgcccgttgccggcaatgccatcccggttatctccaccaggcctctccacgct
gcctccgtcccgtcggggacggtcgtacgggtggtgacgcccacgcggctcgtgaacacg
ccgccgccggccaccggcgccgccgccactgccggacatcccacaccgccgcagggagtc
aagcggccacagtcgcccggaagcaagacgtcgccacctaagcggcacaagagccccccg
agcgaggctgccccggctggcgactcggatatggacactgactcccagccactgaaaaac
agtgacacaggcaacgctgtcacgaaaactggcgcatctgaggacagcgacattctggaa
cttcaggaggagacgacgcctatacaaacaaccgacgtgcaaacggaaacgcagaaacag
gccagcaacgagctgtctgatggctccgcgccagttcctaccgccgtgaaggttgtaaaa
aactccatccgtctcaagctcaaccggtag
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