Lethenteron reissneri (Far Eastern brook lamprey): 133352785
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Entry
133352785 CDS
T09663
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04517
IgSF CAM signaling
lrj04518
Integrin signaling
lrj04519
Cadherin signaling
lrj04520
Adherens junction
lrj04530
Tight junction
lrj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133352785
04518 Integrin signaling
133352785
04519 Cadherin signaling
133352785
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133352785
04520 Adherens junction
133352785
04530 Tight junction
133352785
09142 Cell motility
04810 Regulation of actin cytoskeleton
133352785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133352785
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133352785
04147 Exosome [BR:
lrj04147
]
133352785
Membrane trafficking [BR:
lrj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133352785
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133352785
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133352785
Exosomal proteins of colorectal cancer cells
133352785
Exosomal proteins of bladder cancer cells
133352785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
PTSIIA_gutA
XisI
DUF1139
Motif
Other DBs
NCBI-GeneID:
133352785
NCBI-ProteinID:
XP_061424654
LinkDB
All DBs
Position
41:7643883..7669599
Genome browser
AA seq
894 aa
AA seq
DB search
MDNSYENTMGVEPYMAPEEDWDRELLLDPAWEKQQRKTFTAWCNSHLRKAGTGIENIDED
FRNGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDG
NAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLA
FNALIHRHRPDLIDYEKLRKDDPITNLNNAFEVAEKYLDIPKMLDAEDIVGTARPDEKAI
MTYVSCYYHAFSGAQKAETAANRICKVLAVNQENEKLMEDYEHMASDLLDWIRRTIPWLE
NRVPENTMQAMQGKLEGFRDYRRVHKPPKAQEKCQLEISFNTLQTKLRLMNRPAFMPSEG
KMVSDIANGWSMLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKAKIHEAWTAGKEAMLE
KRDYDSVSLTELKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDVSSVNARCQD
ICAEWDKLGDLTQRRKDTLERTEKVLETIDQLYLEFAKRAAPFNTWMDGAVEDLQDMFIV
HTIDEIQGLISAHEQFKDTLPEAEKEKSAILGVHNEIQKVAQTYNVKLAGPNPYSAITPH
DISSKWERMTQQVPLRDDSLQDELARQQANETLRRQFAASANIVGPWIQTKMEEIGHISI
EMHGTLEDQLNQLRRYEQNIINYKPNIDKLESEYQLVQEALIFDNKHTNYTMEHIRVGWE
QLLTTIARTINEVETQILTRDAKGISQEQMHEFRASFNHFDKDHSGKLGAEEFKACLISL
GYDVGNDQQGEAEFARIMTVVDPNNTGLVTFQSFIDFMTRETTDTDTADQVIASFKILAG
DKNFITADELRRELPPDQAEYCIARMAPYRGPDAVPGALDYMSFSTALYGESDL
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcttacgagaacacgatgggcgtggaaccctacatggcacccgaggaggac
tgggaccgcgagctactgctcgaccctgcctgggagaagcagcagcgcaagacgttcacg
gcatggtgcaactcacacctgcgcaaggccggcacaggcatcgagaacatcgatgaagat
ttccgcaacggcctgaaactcatgctgctccttgaggttatctcaggtgagcgtttggcc
aagccggagaggggaaagatgagagtgcacaagatctccaatgtcaacaaggctctggat
ttcattgccagcaagggtgtgaagctcgtgtccattggtgcagaagaaattgtggatgga
aatgcaaagatgaccctgggtatgatctggacaattattctgcgtttcgccattcaggac
atctctgttgaagaaacctctgccaaggagggcctcctgctctggtgccagcggaagacg
gctccgtataaaaacgtcaacgtgcagaactttcacatcagctggaaggatggcttggca
ttcaatgccctcatacacaggcaccggccggacctgatcgactacgagaaactgcgaaag
gatgatcccatcacaaacctcaacaatgccttcgaagtggcagaaaagtacttggacatt
ccaaagatgctggatgcagaagacatcgtgggcacagcacgtccagatgagaaggccatc
atgacctacgtgtcgtgttactaccatgcattctcgggcgcgcagaaggccgagacggcg
gctaacagaatctgcaaggtcctggctgtcaaccaggagaatgagaaactcatggaggac
tacgagcacatggccagcgatctgctggattggatccggcgcaccatcccgtggctggag
aaccgtgtgccggagaacaccatgcaggccatgcaaggcaaactggagggcttccgcgac
taccgccgcgtgcacaagccgcccaaggcccaggagaagtgccagctggagatcagcttc
aacacgctgcagaccaagctgcggctcatgaaccgccccgccttcatgccctctgagggc
aagatggtctcggacatcgcgaatggctggtccatgctggagcaggcggagaagggctac
gaagagtggctcctcaatgagatccgacgcctggagcggctcgaccatctggccgaaaag
ttcaggcagaaggccaagatccacgaggcgtggaccgcaggcaaggaggcaatgctggag
aagcgcgactatgactcggtgtctctgacggagctcaaggcgctgctgcgcaagcacgaa
gcctttgagagcgacttagctgctcaccaggaccgagtggagcagatcgccgccattgcc
caggagctcaatgagctggactaccacgacgtgtcgagcgtgaacgcacgctgccaggac
atctgtgccgagtgggacaagctcggcgacctcacccaaaggcgcaaggataccctagag
aggacagagaaggtcctggagaccatcgaccagctgtacttggagttcgccaaaagggcg
gcgcccttcaacacgtggatggacggagctgtggaggacctgcaggacatgttcatcgtt
cacaccatcgatgagatacagggtctgatatcggctcacgagcagttcaaggataccctg
cctgaagcagagaaggaaaagagcgccattctgggcgtgcacaacgagattcagaaggtg
gcgcagacgtacaacgtcaagctggccgggcccaatccgtacagcgccatcacgccacac
gacatctccagcaagtgggagaggatgacacagcaggtcccactgcgggacgactctctg
caggatgagctggcacggcagcaggccaacgagacgcttcgtcggcagttcgcagcctcg
gccaacatcgtggggccctggatacaaaccaagatggaggagattggacacatctccatc
gagatgcacggcacgctggaggatcagctgaaccagctgagacgttacgaacagaacatc
atcaactacaaacccaacatcgacaaactggagagcgagtaccagttggtgcaggaggcc
ctcatttttgacaacaagcacaccaactacacaatggagcacatccgcgtgggctgggag
cagctgctcacgaccatcgctcgcaccatcaacgaagtggagacccagatcctgacgcgg
gacgccaagggtattagccaggagcagatgcatgaattccgcgcctcttttaaccacttc
gacaaggatcactctggcaagctgggtgcggaggagttcaaggcttgcctcatcagcctg
ggctacgacgtcgggaatgaccagcagggagaagcagagtttgcgcggatcatgacagtc
gttgatcccaacaacacgggcctggtcacattccagtcattcatcgactttatgacgcgc
gagaccaccgataccgacacagccgaccaggtcatcgcctctttcaagatcctcgccggc
gacaagaacttcatcacggccgacgagctgcggagggagctgcccccggatcaggctgag
tactgcatcgcccgcatggccccgtaccgcgggcctgacgccgtgcctggcgcactcgac
tatatgtccttctccaccgctctctacggcgagagcgacctgtaa
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