Lethenteron reissneri (Far Eastern brook lamprey): 133352969
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Entry
133352969 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133352969
Transcription factors [BR:
lrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133352969
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
133352969
NCBI-ProteinID:
XP_061424992
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Position
42:complement(2607198..2610708)
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AA seq
420 aa
AA seq
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MVLHASGLPSSADDCLSAAEMSDSEGSDLEPGSCMPPSPARVADTAGAVGSALGGGGAAS
GSGNGGQPDWCKTANGHIKRPMNAFMVWSQIERRKIMMESPDVHNAEISKRLGRRWKQLK
DCEKVPFMREAERLRLKHMADYPDYKYRPRKKAKTPGGGGGGGAAGGCAAAAAAAGGGAG
PVSPQEKPLKSSKKGEPAKRQQQSSGGSGGKSKAQKLPPHLRAPSGGRGLKTVTTKTVRD
LLAPPQARHHHHHHNHHHQQLGNHHQHSSSQPTSPAAVPPSPTLSSGSAEGRESASFYED
ISGVRVTTIKIEPGSVSPSVVPSVSAPMATMLSSGGAGGAAGGMDDSILDFALSASERGE
LQLQTLGSIGLSTLDRDIDSLSDGSSASHFDFPDYCTPEVSELISGDWFESSITNMVFTY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcacgcctctgggctcccaagcagcgctgacgactgcctgtccgccgccgag
atgagcgactcggaggggagcgacctggagccgggctcctgcatgccgccgtccccggct
cgcgtcgccgacacggccggcgctgttggctcggcgctgggtggtggtggtgccgcctcg
ggcagcggcaacggcggccagccggactggtgcaagacggcgaacgggcacatcaagcgg
cccatgaacgccttcatggtgtggtcccagatcgagcggcgcaagatcatgatggagtcg
ccggacgtgcacaacgcggagatctccaagcggctgggccgccgctggaagcagctcaag
gactgcgagaaggtccccttcatgcgggaggcggaacgcctgcgcctcaagcacatggcc
gactatccggactataagtaccggccccgcaagaaagccaagactcccggcggaggggga
ggaggaggagcggcgggaggctgcgctgctgctgctgctgctgccgggggcggcgcgggg
cccgtgtccccgcaggagaagccgctcaaatcgagcaagaagggcgagccggcaaagcgg
cagcagcagagcagcggcggctccggtggcaaatccaaagcgcagaagctgccgcctcac
ctgcgggcaccctcgggcggccgtggtctcaagacggtgaccaccaagacggtgcgggac
ctgctggcgcctccacaagcccggcaccaccaccatcatcacaatcatcatcatcagcag
ctcggcaaccatcaccagcactcgtccagtcagcccacgtcccccgccgcggtgccgccc
agcccgacgctgagcagcggatctgcggagggccgcgagtccgcgagcttctacgaggac
atctcgggcgtgcgagtgacgaccatcaagatcgagcccggctccgtgtcgccgtccgtg
gtgccctccgtctcggcgccgatggccacgatgctttcgtccggaggagccggaggagca
gcgggagggatggacgactcgatcctggactttgcgctgagcgcgtccgagcggggcgag
ctgcagctgcagacgctgggcagtatcggcctctccacgctcgaccgagacatcgactcg
ctaagtgacggcagttctgcgtctcactttgattttccagactattgcaccccggaggtg
agcgagctcatctctggtgactggttcgaatcgagcatcaccaacatggtcttcacgtac
tga
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