Lethenteron reissneri (Far Eastern brook lamprey): 133353246
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Entry
133353246 CDS
T09663
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj00100
Steroid biosynthesis
lrj01100
Metabolic pathways
Module
lrj_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
133353246 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lrj01006
]
133353246 (FDFT1)
Enzymes [BR:
lrj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
133353246 (FDFT1)
Prenyltransferases [BR:
lrj01006
]
Terpene biosynthesis
Squalene/phytoene synthase
133353246 (FDFT1)
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Ortholog
Paralog
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Motif
Pfam:
SQS_PSY
DUF4131
Otopetrin
TFIIA
Motif
Other DBs
NCBI-GeneID:
133353246
NCBI-ProteinID:
XP_061425317
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Position
43:complement(4186730..4216336)
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AA seq
579 aa
AA seq
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MQIRDAQSGFGCGWWLRVEVVVVGGAVWIDLDMRREDMAHLYRARGLMAGFCCCWAGACV
RRARHHHHNNHHLHQQQQQQHHQHHHQQHRQRRTSPTCMACTPRTLSTNVPPTQQPPSSS
SSSSSSSTSSALASVAVVALSPLAMSVMADGELGCYRPQAGHNENIQDSGLSNDGFPDSM
APSLRTCYRYLNQTSRSFAAVIQALDGELRDAVCIFYLVLRALDTVEDDMTIPNAAKVPM
LRDFHSFLYQHEWSYSLSNEKDRQVLEDFPTISLEFRKLAKIYRDVIGDICQRMGAGMAE
VLQKKVGSMQEWDQYCHYVAGLVGIGLSRLFAASGLEDVVVGEDAALANSMGLFLQKTNI
IRDYLEDTRDRREFWPQEAWSKYAGSLSDLARPENLCAAVGCLNELVTNALGHVPDVLTY
LSRLRNQSVFNFCAIPQVMAIATLSACYNNPAVFGGVVKIRKGQAVTLMMDATSLASVRA
MMLQYAQEIQRCIPPDDPSATQTRNIVLRIKAMSRAGASSSAGGGDSGDAQEEEEVNGRH
QGTGFISPLSLTMGMVLAALGWQYWATVQGVAAKYLQGL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatccgtgatgcccagtctggatttgggtgtggatggtggttgcgggtggaggtg
gtggtggtaggaggcgcggtgtggatcgatctggacatgcgacgggaagatatggcccat
ctataccgtgcacggggcctcatggccggcttctgctgctgttgggccggcgcatgtgtt
cgccgagctcggcaccaccaccacaacaaccaccacctccaccaacagcagcagcagcag
caccaccagcatcaccaccagcagcaccggcagcgtaggacctccccaacgtgcatggct
tgcacgcccagaactctttccacaaacgtgccaccaacacagcagcctccgtcgtcgtcg
tcatcatcttcatcttcttcaacatcgtcagccctggcttctgtggcggtggtcgcgttg
tctccgctggcgatgtcggtgatggcggatggagagctgggatgctacaggccccaggca
gggcacaacgagaacatccaggactctggcctgtctaacgatggctttccggactctatg
gcgccttccctgcgcacgtgctaccgctatctcaaccagacgagccgctccttcgccgcc
gtcattcaagcgctggacggggagctcagggacgccgtgtgcatcttctacctcgtgctg
cgggcgctggacacggtggaggacgacatgacgatccccaacgccgccaaggtgcccatg
ctgcgcgacttccacagcttcctgtaccagcacgagtggagctactcgctgagcaacgag
aaggaccgccaggtcctggaggacttccctacgatctcgctggagttccgcaagctggcc
aagatttaccgggatgtcattggcgacatctgccagcgcatgggagcgggcatggctgaa
gtgctacagaagaaagtgggctccatgcaggaatgggatcagtactgtcactacgtggcg
ggcctggtggggatcgggctgtcgcggctgtttgcggcgtcgggtctcgaggacgtggtg
gtgggagaggacgcggcgctcgccaactccatggggctcttcctgcagaagaccaacatc
atccgagattacctggaggatactcgcgaccgcagggagttctggcctcaggaggcgtgg
agcaaatacgcggggagcctgtcggacttggcacgccctgagaacctgtgcgcggccgtg
ggctgcctcaacgagctggtgaccaacgcgctgggccacgtgccagacgtgctcacctac
ctgtcgcgcctgcgcaaccagagcgtcttcaacttctgcgccatcccccaggtgatggcg
atcgccacgctgtccgcctgctacaacaacccggcggtgtttggcggcgtcgtgaagatc
cgcaagggccaggcggtcacgctcatgatggacgctacgagcctggcgtcggtgcgcgcc
atgatgctgcagtacgcacaggagatccagcgctgcatcccgcccgacgacccttcggca
acccagacgcgcaacatcgtgctgcgcatcaaggccatgtcgcgcgcgggcgcatcgtcg
tcggcaggcggtggcgacagcggcgacgcgcaggaggaagaggaggttaacggccgccat
caggggactggcttcatatcgccgctgagcctcaccatgggaatggttctggccgcgttg
ggctggcagtactgggccacggtgcagggggtcgctgccaagtacctgcagggcctgtga
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