Lethenteron reissneri (Far Eastern brook lamprey): 133353482
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Entry
133353482 CDS
T09663
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lrj04054
]
133353482
Pattern recognition receptors [BR:
lrj04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
133353482
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
LRR_EndoS
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
133353482
NCBI-ProteinID:
XP_061425751
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All DBs
Position
44:complement(9494906..9498139)
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AA seq
959 aa
AA seq
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MARLVSWRSFPAALLLASLGLVAPPATLGFFLRKCIQDARFETSVACVDARITDARDAIA
DLHGSPQTLNLSRNEIAQLTSGGFKNLSRLVNLRLDRNRIRSIQPGAFEGLKGLRSLNLT
GNNIAHLEADAFKGAEGLLELLLAGNTLKVAPEPFRPLRQLVNVSLMENSLCDFSRVVEA
VSVLPSLRSLDLDGNNFAVLSVSGASIRLPGSVRSLHIAGCGVHRITLPGDFFANVAFLD
MSRNNLTDASGLAALKLSRVEEVFLGANNLSSGAFKQLRSLSPTTLHMTSAGLSSTRSLQ
SLCNSTLGRRVSTLTLLSNDIRAFTDAFTWCRELASLDLSINNLKSMGKYELVNGSSRLR
DLTVQHNHLTSLESCWNSNANTLRCANLSQLETLALTYNRITHLDGHALIHAPNLLSLAL
NFNTIATINFTAFAGLTRLVHLRLDNNLITNIRKQFFHGLDNLETLNMRNNKVTTIFSHT
FTFLKHLQILDLGGNRISSLKQNAMSGLHRLRNLYIDGNFLRIINSHMFNGLHSLHNLDL
VRNSISYKYRCQSNSPFVNLTNLTTLKLSAQQPYGLQSIPVDLFTGLRSLKYLYLAGNKI
TFHNTLPFDELVNLKYLGMQDVCSGLQNMNANMFQKLTQLGTLDLGNIGINFLNKKQFQN
QSNMRVLYLGANGIRAMIEDVIAPMKELRYLDVTSNPLQCTCDNAWFKNWSRSSDVQVVG
LYGVSCSGDNGAAGNSSRLFVDFDASVCYEKWGKVMFMLTLPFFSLLTACPLVFVKARWH
IRYGYYMFRAWFREYRRRDEDARAYDYDAFISYNSRDEDWVMAELVPRLEQEGPTFCKLC
LHHRDFALGKYIVDNIVDAIYRSRKTVCVISHSYLESEWCSWEIQMAAYRLFDEHKDVVI
MVFLEDIPDYKLSAYHRMRKIIGDKTYINWPEDAAGKDLFWAKLRAAIRGPLAMESRLV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggctcgtgtcgtggcggagtttcccggccgcgttgctcctcgcgtctctgggt
ctcgtggctccccccgcgacgctcggtttcttccttcggaagtgcattcaggacgccagg
ttcgagacgtcggtggcgtgcgtggacgcgcgcatcacggacgcgcgggacgcaatcgct
gacctccacgggagcccacagaccctaaacctgtcccgcaacgagatcgctcagctcacg
tcgggcgggttcaagaatttgagtcggctcgtgaacctgcgcctcgacaggaaccgcatc
cgcagcatccagccgggtgccttcgaagggctcaagggtctgcgcagcctcaacctcaca
gggaacaacatcgcccacctggaagcggacgccttcaaaggagcagaaggtctcctcgag
ctcctgctcgctgggaacacgctgaaggtcgcgcccgagccgtttcgaccgctgcgacaa
cttgtgaacgtgagcctgatggagaactccctctgcgacttctctcgcgtcgtggaagcc
gtgtccgtgctgccgagcctgcgctctctcgacctcgacgggaacaacttcgccgtgctc
agcgtgagtggggcgagcatcaggctccctgggagcgtcaggagccttcacatcgccggg
tgcggcgtccacagaatcacgctgcccggtgacttcttcgcgaacgtcgctttcctcgac
atgtcccgcaacaacctgacggacgcatcgggcctggcggcactcaaactgagcagagtc
gaggaggtgttcttgggagcgaataatctcagcagcggcgccttcaagcagctgcgttct
ctgtcgcccacgacgctacacatgaccagcgcggggctgagcagcacgaggagtttgcaa
tcgctttgcaactcgaccttgggacggcgagtgagcaccctcacgctgctctcaaacgac
attcgtgcgttcacggacgccttcacctggtgccgcgagctcgcgagtcttgacctctcg
atcaacaacctcaagtccatggggaaatacgaactggtcaacggttccagcaggctgcgc
gatctgaccgtgcagcacaaccacctcacttcgcttgagtcttgctggaacagcaacgcg
aatactctgcggtgtgccaatctctctcagctcgagactctggccctcacctacaacagg
atcacgcatctggacggacacgcgctaatccacgccccgaatctgctctcccttgcccta
aacttcaacacgatcgcaaccatcaacttcacggcctttgcaggcctcaccagacttgtg
catctccgtctggacaacaacctcatcacaaacatcagaaaacaattcttccacggtctg
gataacttggaaaccctcaacatgaggaacaataaggtaaccacgatcttctcgcacacc
ttcacgtttctgaaacatcttcagattttggatctgggtggaaaccgcatctcttcgttg
aaacaaaacgcaatgtccggactgcatcgtctgaggaatctctacattgatgggaacttc
ctcaggatcattaattcgcatatgttcaatgggctgcactcgctccataaccttgacttg
gtccgaaacagcatttcatacaaatatcgctgccagagcaactctccattcgtgaacctc
accaacctcaccacgctcaagctgagcgcccagcagccgtacggactgcagagcatcccc
gtcgacctcttcacgggtctacgatcgctcaagtacctttacctggcagggaacaagatc
accttccacaacacgctgccattcgacgaactggtgaacctaaaatacctgggcatgcaa
gacgtgtgtagcggcctgcagaacatgaatgcgaacatgttccagaaactcacacagctc
gggactctggatctgggcaacatcggcatcaacttcctgaacaaaaaacagttccagaat
cagagcaacatgcgcgtcctctacctgggcgccaacggaatcagggccatgatcgaggac
gtgatcgcacccatgaaggagctgcgctacctggacgtgacctccaatcccctgcagtgc
acgtgcgataacgcgtggttcaagaactggtcgcggagcagcgacgtgcaggtggtcggc
ctctacggcgtctcgtgctccggcgacaacggcgcggcgggcaactcgtcccgtctcttc
gtcgacttcgacgcctccgtgtgctacgagaagtggggcaaggtcatgttcatgctcacg
ctgcccttcttctcgctgctcacggcgtgcccgctcgtgttcgtgaaggcgcgctggcac
atccgctacggctactacatgttccgcgcctggttccgcgagtaccggcgtcgtgacgag
gacgcgcgcgcctacgactacgacgccttcatctcctacaactcccgcgacgaggactgg
gtcatggccgagctggtgccgcggctggagcaggaggggcccacgttctgcaagctgtgc
ctgcaccaccgcgacttcgcactgggcaagtacatcgtggacaacatcgtggacgccatc
tacaggagccgcaagaccgtctgcgtgatcagccacagctacctggagagcgagtggtgt
tcgtgggagatccagatggccgcctaccgcctcttcgacgagcacaaggacgtggtcatc
atggtctttctggaggacatccccgactacaagctttccgcctaccaccgcatgcgcaag
atcatcggcgacaagacgtacatcaactggcccgaggatgctgccgggaaggacctcttc
tgggcgaagctgcgagcggcgatcagaggacctctggccatggagagccgcctcgtgtga
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