Lethenteron reissneri (Far Eastern brook lamprey): 133353936
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Entry
133353936 CDS
T09663
Name
(RefSeq) uncharacterized protein LOC133353936 isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03015
mRNA surveillance pathway
lrj04261
Adrenergic signaling in cardiomyocytes
lrj04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133353936
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133353936
09158 Development and regeneration
04382 Cornified envelope formation
133353936
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133353936
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133353936
03036 Chromosome and associated proteins [BR:
lrj03036
]
133353936
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133353936
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133353936
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133353936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
133353936
NCBI-ProteinID:
XP_061426435
LinkDB
All DBs
Position
45:complement(3336376..3426920)
Genome browser
AA seq
1180 aa
AA seq
DB search
MESRWLDQQAVPYTLKMSSVQRFGNVLVERSPMGPVHYSPAGLQDVQPPAAGHRRSSTEP
TAAPLHSLPRYGETVGRRNGLPHHRSWASADGDHHTGTQQQCQQQPQQNLDQQHHQQLQL
SQHHHDHHGLHHNNNHHHQHVGPHAAPQKNTVINLASGKAKEVSGDWSKVAALSPSTGSG
FGGGPSSGGGGSGGGGGGGGGGGGGGGGHQPASATNPPAVVMRRAGGRKVKAETGSQRES
QLFAMELAELMSSATANSETRDLGLPGLPLGGLLTPADVEGLLKRAYGREGIESCLHILL
RCSEDLKQCTEIIRRSIRQRKSSPNGGGGGTDEDAENQYRQLVSQLSMHLRKLPTPQEGL
DGPRQEALADFLQSLCELQGVAEHGGERPPRYEDVVGPVIPDTVGGAKAAGHLEGLLDDE
RVAAARLPVSDVLSGSVPVQVRRVLPEEGVGCTEALHIVEEREDVGVSPKSSLPTAAQGQ
GLFLSSDKQLQRPRYVYAPWVSRQWNLEAVGSPSQVIGKQGLVQDFSRAGQFARDGVSGV
TLPESGAVVAHRTGVQRPSVIVSHRGNRPGERHVETSPSHEEEMMDLERLINELEEFSRS
AGCADNGGSEDTATRQHSAMAPSASTGTAISTSGLRSDKEAVNRENRVQHRVIGPARSPA
PDPPLVDGVKQSYRIESLANRWGAGRHGADQVVLSQSPRVLKVAPASTTAAGVKDKKSLP
PALPKPHAVPAHSLVPRFYFPHGRPAPNGPTSDQMIERVEESFTPYPDERADIHQMATVA
KACGCPVYWKSALFHAASGERTGFVSVHTFVAMWRKLLRTCHDDSAKFVALLARPGCSYL
VQEDFIPLLQDIVDSHPGLTFLKEAPEFHSRYITTVIQRVFYVVNRSWSGRISLTELRKS
NFLQTLALLEEEEDINQITDYFSYEHFYVIYCKFWELDTDHDLYIDRKDLEKHNDHAISS
RMIDRIFSGAVTRGPATKREKRMSYADFVWFLISEEDKKTATSVEYWFRCMDLDGDGVLS
MYELEHFYGEQCARMDKLGIEPLPLSDCLCQMLDLVKPQVEGKITLKDLKRCRMAYVFYD
TFFNLEKYLEHEQKDPFSVQKEADGEVPESSDWDRYAAEEYEILVAEESANQRMQAISYE
EDLEEALLGKQVGRLTLSDPPNPSTRFSDDQYEYDDDFEY
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcggtggctggaccaacaagccgtgccctacaccctcaagatgtcgtccgtg
cagcgtttcggaaatgtcctcgtggagagaagccccatgggccccgtgcactacagccct
gctggcctacaggacgtgcaaccgcccgccgccggccaccgtcgttcaagcactgagccc
acagctgccccgttgcacagcttgcctcgctatggcgaaacggtggggaggaggaatgga
ttaccgcaccatcgctcctgggcctctgcagacggcgatcatcacacaggaacccaacaa
cagtgtcagcagcagccgcagcagaatcttgatcagcagcatcatcaacaactgcagctc
tctcagcatcaccatgaccatcacggtctccatcataataataatcatcaccatcaacac
gttggtccccatgcagcgccacagaaaaacaccgtcattaatttggcaagtggaaaggcc
aaggaggtttctggggattggtccaaggtggccgcgttgtctccgtccactggtagcggt
tttggcggtggacccagcagtggaggtggtggcagcggtggtggtggtggtggtggtggt
ggtggtggtggtggtggtggtggccaccagccagcatcggccacaaatccgccggctgta
gtgatgcgcagggcaggtggccgcaaggtgaaggcggaaacgggcagccagcgtgagagt
cagctgttcgcaatggaactcgcagagcttatgtccagcgccacggcaaactcggagacg
cgcgatctcggcctccccggcctcccgctgggcggtctcctgacgccggctgatgtggag
ggccttctgaagcgggcgtacggacgggagggcattgagtcgtgcctccacatcctgttg
cgctgctctgaggacctaaagcagtgcaccgagattatccgcaggagcatccggcagcgg
aagagttcgcccaacggcggcggcggcggcactgacgaagacgccgagaaccagtaccgg
cagctcgtgtcgcagctgtcgatgcacttgagaaagctgccgaccccgcaggagggcttg
gatggacctcggcaagaggcgctcgccgacttcctgcagagcctctgtgagctgcagggg
gtggcagagcatgggggcgagcggccgccccgatacgaggatgtcgtcgggcctgtgatc
ccggacactgttggcggcgctaaagctgctggccacctcgaagggctgttggatgatgag
cgtgtcgccgctgccagattgccggttagtgacgtcctctcgggttcggtgcccgtgcaa
gttcggcgggtcttaccagaagagggggtcggatgtacggaggccttgcacatcgtggaa
gaacgagaagatgttggcgtgagccccaagtcctctcttccaactgccgctcagggccaa
ggtctctttctctcatcagacaaacagttgcaaaggccacgatatgtgtatgcaccttgg
gtttctagacaatggaacttggaagcagtggggtctccttcgcaggtcatcggtaagcag
ggcctagtacaggatttttctagagccgggcaattcgcccgtgatggcgtgagtggggtg
acccttccggagtcaggtgcggtagtggcgcatcgtacgggcgtgcagcgtccttcagtg
atcgtcagccaccgaggaaaccgtccgggagagcggcatgtggagacatccccaagccac
gaggaggagatgatggatctcgaaaggttaatcaatgagttggaggaattctctcgcagc
gcgggttgcgcagataacggcggcagcgaggacacggcgacgcggcaacattcggcaatg
gcaccaagcgcctcaaccgggacggcgatctcgacaagtggactccgctccgacaaggag
gctgtaaatcgagagaatcgggttcaacatcgggttattggaccggctcgttctccagca
ccagatcctccgctcgttgacggcgtcaagcagtcgtatcggatcgaatcgctcgccaac
agatggggcgccgggagacatggagctgatcaggtggtgctcagtcagtcgccgagggtg
ctgaaggtcgcgcccgcaagcaccacagccgccggcgtcaaggacaagaagtcgctgcct
ccggcgctgcccaagccgcacgcggtgccggctcactcgctcgtgccgcgcttctacttc
ccgcacggccgcccggcgcccaacggccccacgtcggaccagatgatcgagcgggtggag
gagtcgttcacgccttacccggacgagcgcgccgacattcatcagatggccaccgtggcc
aaggcctgtggctgccctgtttactggaagtcggcgttgttccatgcggcgagcggggag
cgaacgggtttcgtgtccgtgcacacctttgtggccatgtggagaaagctcttgcgaact
tgccacgacgactcggccaagtttgtggctctgctcgcgcgtcccggctgcagttacctg
gtacaggaggacttcatccccttgctgcaggacatcgtggacagtcaccctggactcaca
tttttgaaggaggcaccggaattccactcgcggtacatcacaacggtgatccagagagtg
ttttacgttgtgaatcgctcgtggtccggacggatttcgctgaccgagctacggaaaagc
aacttcctgcagacgcttgcgctgctcgaggaggaggaggacatcaaccagatcaccgac
tacttctcctacgagcacttctacgtcatctactgcaagttctgggagctggacacggac
cacgacctctacattgaccgcaaggacctggaaaagcacaacgaccacgcgatctcaagc
cggatgatcgacaggatattctccggagctgtcacgaggggaccggccaccaagcgcgag
aagcggatgagctacgccgactttgtgtggtttctcatctcggaggaagacaaaaagacc
gcgacgagtgtggagtactggtttcgctgcatggacctggacggcgacggcgttctgtcc
atgtacgagctggagcacttctacggcgagcagtgcgcgcgcatggacaagctcggcatc
gagcccctgccgctcagcgactgcctctgccagatgctcgacctcgtcaagccccaggtg
gaaggcaaaatcacgctgaaggatctgaagcggtgcagaatggcgtacgtcttctacgac
acgttcttcaacctcgagaagtacctggagcacgagcagaaggaccccttctccgtccaa
aaggaggcagatggggaggtgcccgagtcctcggactgggatcgctacgccgcagaggag
tacgagatcctggtcgcagaggagtcggcaaaccagcggatgcaggccatctcgtacgag
gaggacctggaagaggcgttgctgggaaagcaggtcgggcggctaaccctgagcgaccct
cccaacccaagcacgcgcttcagcgacgaccagtacgagtacgacgacgacttcgagtac
tga
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