Lethenteron reissneri (Far Eastern brook lamprey): 133353957
Help
Entry
133353957 CDS
T09663
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1-like isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133353957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
FERM_C
PH
FERM_M
FERM_N
FA
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
133353957
NCBI-ProteinID:
XP_061426474
LinkDB
All DBs
Position
45:complement(6262266..6366872)
Genome browser
AA seq
1028 aa
AA seq
DB search
MGEIEGTYRRVDPAEAARGKPTPVRATRSDESAAEAHGNLLPITVHLLDDTEKIFDVPPK
AEGIALLTTVYKYLNLVESDYFGLELEPYPKCGFTVWLDSQKPIAKQVKKPKNVVFKLGV
KFFPEDSSQLQEEITRYQFALQVRQDLLAGRLVASEMSSSLMAACLLQADVSDYEEQRSS
QQLREVQYLPNQEVLANRILDYHRQFAGLSPAEADVQLLEIARRQDTYGLRLHQAYDKEG
ASINLAVGYSGVSVFQNTTKINTFNWAKIRKLSFKRKYFLVKFHPDIEGNYQDTLEFSMK
GRDACKAFWKGCVESHAFFRLQDPPRPKPKSVLFSRGSSFRYSGRTQKQVSMYVRDHGSR
RVQFERRSTKMRSSQSHRDIPVNPPQLTAEPPKQSASFSEGESGGHVWDPVSLILAKEGS
LPPKQLETTSDQLPSPTGRVDQGPDVLVSRLRPPGDPQTEPWRVVSQAVVVAVASTSPLP
PSPTGTGAATEPAAAARVEEEEEARKKRCPADKAYFIAKEICTTERTHIKDLEVITVWFS
SFLGQESPMSKELSSKLFSSFQPLCDFHRTFLKEVETRLTLWEGKSNAHLKGDHEKIGDI
MLKNMQLLKRLVWPLCGMEQVLRSLESEVQASHKLADACRTFELQRVCHLPLGGFLLRPL
QRPLHYRLLLERLCKHHAPDHPDFRDCRAALAEVSEMTYGLQDTLLHLENVQKLMELQRD
LTDMEDLAMPGREFIREGCLHKLTRKGLQQRMFFLFNDMLVYTSKALTTNNQFKVHGKMQ
LSTLKITASEREFSIPCSFTLSTPQKHVVVAANSPEEMDKWVEDVTLAARRAADDTVDHA
TAGRSPCRETDIVESHIYSSDDQEDSAEDEAASPRSPHGASSERLSVHQQTSSTVQVCCH
RQTSVSLLDISRAAENQLSGYLLRKFKNNSGWQKLWVVFTNFCLFFYKTHQDNFPLASLP
VLGYSITLPSESDGILKDYVFKLQFKSHIYFFRAESEYTFERWMEVIRSATSSSARTRLL
SRKDSHFT
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggggagatcgagggcacgtaccggcgcgtggacccggccgaagcggccagggggaag
cccacgccggtccgagccacgcggtcggacgagtcggccgcggaggcccacgggaacctg
ctgcccatcaccgtgcacctcctggatgacacggagaagatcttcgacgtgccgcccaag
gcagagggcattgcccttctcaccaccgtctacaagtacctcaacctcgtcgagagcgat
tacttcggactggagttggagccctaccccaagtgcggattcacggtttggctcgattcc
cagaagcccatcgccaagcaagtaaagaagccaaaaaacgtcgttttcaaactcggggtg
aagttctttcctgaagactcgagccagctgcaagaggaaatcacaaggtaccagttcgcg
ctgcaggtcagacaggacctcctcgcgggtcgcctggtggccagcgagatgtcctcctca
ctcatggccgcgtgcctcctccaggccgacgtgagtgactatgaggagcagcggtcgagt
cagcagctgcgggaggtgcagtacctgcccaaccaggaagtcctcgccaaccgcatcctg
gactaccaccggcagttcgccggcctctctccggccgaggcggatgtgcagctgctggag
atcgcgcgccggcaggacacgtacggcctgcgcctgcaccaagcctacgacaaggagggc
gcgagcatcaacctggcggtcggctactccggcgtctccgtcttccagaacacaaccaaa
attaacaccttcaactgggcgaagatacggaagctcagcttcaaacggaagtacttcctc
gtcaaatttcacccggacattgagggtaactaccaggacaccctggagttcagcatgaag
ggacgcgacgcttgcaaggccttctggaagggctgcgtggagagccacgctttcttccgc
ctccaggacccgccgcggcccaaaccaaagtcggtccttttcagccgcggatcatccttc
cgctacagcgggaggacacagaagcaggtgtcgatgtacgtgcgcgaccacggcagcagg
agggtgcagttcgaaaggaggagcacgaagatgaggtcatctcagagccatcgagacatc
cctgtgaaccccccgcagctcacggcagagccccctaaacagagcgcgagcttctccgag
ggggagagcggcggacacgtgtgggacccggtgtctctcatcctcgccaaggaaggttcc
cttccgcccaagcagctggaaaccaccagcgaccagctcccctcccctaccggccgagtt
gaccaaggccccgatgttctggtgagtcgtctgcgacctccgggggacccgcaaaccgag
ccgtggcgagtcgtgtcccaagcggtggtggtggcggtggcgtccacgtcgccgctgcct
ccgtctcccaccgggaccggggcagctacggagcccgcggcagcggcacgggtggaagag
gaggaggaggcgagaaaaaagcggtgcccagctgataaggcctacttcatcgccaaggaa
atctgcacgacagaaaggacccacatcaaggatctagaagtcatcacggtgtggttttcc
agctttctgggccaggagagccccatgtccaaggaactttcctccaagctcttctcctct
ttccaaccgttgtgcgacttccaccgaactttcctcaaggaagtggagaccaggctcact
ctctgggaaggcaagtcgaatgcccacctcaagggtgaccacgaaaagatcggagacatc
atgctgaagaacatgcagctgctcaagaggctggtgtggccgctctgcgggatggagcag
gtgctgcgcagcttggagagcgaggtgcaggcctcccacaagctcgccgacgcctgccgc
accttcgagctgcagcgcgtgtgccacctgccgctgggcgggttcctgctgcgccccctg
cagcgcccgctgcactaccgcctgctgctcgagcgcctgtgcaagcaccacgcgccggac
cacccggacttccgcgactgtcgcgcggcgctggcggaggtgagcgagatgacgtacggc
ctgcaggacacgctcctccacctggagaacgtccagaagctcatggagctgcagagggac
ctcaccgacatggaggacttggccatgccaggccgggagtttatccgtgagggctgcctg
cacaaactgacgagaaagggcctccaacagcgcatgtttttcctcttcaacgacatgctg
gtgtacaccagcaaggcgctcaccaccaacaaccagttcaaggtccacggcaagatgcag
ctcagcactctgaagatcacagcgagcgagagagagttctccattccttgctccttcacc
ttgtccaccccgcagaagcacgtcgtcgtggctgcgaactcgccggaggagatggacaag
tgggtggaggacgtcacgctggcggcgaggcgcgccgccgacgacacggtcgaccacgcc
acggccggccgctcgccgtgccgcgagaccgacatcgtggagagccacatttactcctcc
gacgaccaggaggactcggccgaggacgaggccgcgtctccgcggagccctcacggagcc
tcctccgagaggctgtccgttcaccagcagacgagcagcaccgtgcaagtgtgctgccac
cggcagaccagcgtgtctctgctggacatcagccgggcggctgagaaccagctgtctggc
tacctcctgagaaagttcaagaacaacagcggctggcagaaactctgggtcgtcttcacc
aacttctgcctcttcttctacaaaactcaccaggacaacttccccctggccagcctgccc
gtgctgggctacagcataacgctgccctccgagtcagatgggattctaaaggactacgtc
ttcaagttgcagttcaagtcccacatttacttcttcagggcggagagcgagtacacgttt
gagcgatggatggaggtcattcgcagcgccaccagctcgtccgcgaggacgcgtctgctc
agccgcaaagactcgcatttcacatag
DBGET
integrated database retrieval system
