Lethenteron reissneri (Far Eastern brook lamprey): 133354146
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Entry
133354146 CDS
T09663
Symbol
ELP1
Name
(RefSeq) LOW QUALITY PROTEIN: elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrj03016
]
133354146 (ELP1)
Transfer RNA biogenesis [BR:
lrj03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
133354146 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Rieske
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
133354146
NCBI-ProteinID:
XP_061426739
LinkDB
All DBs
Position
46:complement(8850196..8886305)
Genome browser
AA seq
1393 aa
AA seq
DB search
MRNLRLALSSHVRPHRALAAAHCVSVNTDTAVVFVGSARGLAGLDPHSGEVVVDVSLVDE
GYLAGDGSGRVVGIQTLPDADAACVATSQGDVLLYSVTRAQLECVGSVDSGLTAMSWSPD
QDVMVLTTGADTIIAMTRDFDPLTEVPMHQDDFGEGKFVTVGWGRKETQFHGSEGKQAAH
KKQEVVAPAFTWDDGRPRVSWRGDGQFFAVSSVCPHTGARRVRVWSRECVLQATSEILAG
LEPALAWKPSGSLIASSQRKPGRHDVVFLERNGLAHGEFTLPFGRDDMQVRELLWNADST
ILAVWLEELGKETETPAGDRRSFVQLWMVGNYHWYLKQSLEMGGGEGGGEGGEPLAALCW
DPECAQRLHCVMAGGAYVVREWWPGTDAGRCVDEGAGSSVAVIDGDRVLLTPFRWMTVPP
PMAAFHLQLPLAAERASFCPESGRADDVAVLLCDRRRVLVYAHGGGAGGNGSAAPDPTVR
LGQACGNGFRTRVGLPSLVRTYRIRESDRAEGGETGGSSPPPPPSMRGFREFTWLGRDRF
LAVSQGSSLCRSVVMLLRGSPLEQGGEEPAEETLTAAGSALELHGRVLSVTLVPGGDSAL
LQLSNGELLRCCHAVEPLSVEAWTDARGRPVSFPVPCVHVEVCTMAGQEVALGLTERSRL
FANDIEVASNCTSFCVHPELLLFTTRLHTLRCVSRLAPVAALAGLPSGGDLPGDETVRRV
ERGSRIVAIVPSDCRLVLQMPRGNLETIQPRALLLSQVRKWLDSLKFKEAFECMKKQRIN
LNLLYDHNPKAFMDNIGEFLTQVQSAGNVNLFLTELRDEDVARTMYPVPYGWAQPPAAVA
TGTATATVAAEARARSTDKVNAVCDGLRAAMEALDPDRFFLSILTALVRRKEPDVETALM
RVRDVAERAAEGAAGDGGAEEAERRAQEALGYLLLLVDEGELYECALGTYDFRLVLMVAQ
RSQKDPKEYLPFLNDLKKMETNYQRYSIDNHLKRYGKALVHLSRCGRDRFPELLSLVRSR
VLYREALRLFPCGGEEYTALSEAFGRHLLEERHLGAEAGLVFARAALWQAALSAFRDAGC
WRQALCAATSLGYPALELTRLARDMAEKLAAQRKHVDAACLLEQYAEDHEEAVVTLTEGG
AWEEAMRLIHKHNRLDLLETNLKPAVKEAHGQQMASVRAQAALFERHVARLAVVRADKER
ARHDLLADGGNDEGPECDLYSDASSVASSVASSGVLSSKYSQSNSRISGRSSKNRRKAAR
KRHSLREGSPSEEPALLGAIGDIARAVDASTAEVGPLLRMLLLFDWESEGLELQAELSSL
LLRVERALPEVWPPTAASVAPVFGPDSTVNSIAASLSQPRETSLGQEDDESLTAPRLSRS
TEWKLRSLDPASV
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctccggctggcgctgagctcgcacgtgcggccccaccgcgcgctggcggcg
gcgcactgtgtgagcgtcaacacggacacggccgtcgtgttcgtcggctcggcgcgggga
cttgccgggctcgacccgcacagtggagaggtcgtcgtggacgtgtcgctggtggacgag
gggtacctggcgggcgacgggagcggccgcgtcgtggggattcagacgctgcccgacgcc
gacgcggcttgcgtcgccacttcgcagggcgacgtcttgctctacagcgtcacaagggca
cagctggagtgcgtgggcagcgtggacagcggcctcacggccatgagctggagccccgac
caggacgtgatggtgctgacgacgggcgcggacaccatcatcgccatgacgcgcgacttc
gatccgctcaccgaggtgcccatgcaccaggatgatttcggagaaggcaagttcgtgacg
gtcggctgggggcggaaggagactcagttccacggctcggaggggaagcaggcggcgcac
aagaagcaggaggtggtggcgccggcgttcacctgggacgatggccgcccgcgcgtcagc
tggcgtggcgacgggcagttcttcgccgtgagctccgtgtgcccacacacgggagcccgg
cgcgtgcgagtgtggagccgcgagtgcgtgctgcaggcgaccagcgagatactcgcaggc
ctcgagcccgccctcgcctggaagccgtcgggaagcctgatcgccagctcgcagcgcaag
cccggccggcacgacgtggtgttcctggagcggaacggcctggcgcacggagagttcacg
ctgcccttcggccgcgacgacatgcaggtgagggagctgctgtggaacgcggactccacc
atcttggccgtgtggctcgaagagcttggcaaggagacggagactcccgccggagacaga
cgcagcttcgtgcagctgtggatggtggggaactaccactggtacctgaagcagagcctg
gagatggggggcggcgaaggtggcggcgagggcggcgagcctctggcggcgttgtgctgg
gaccccgagtgcgcccagcggctgcactgcgtcatggcgggcggcgcctacgtggtgcgc
gagtggtggcccggcaccgacgcggggcgctgcgtggacgaaggcgctggctccagcgtg
gccgtgatcgacggggaccgtgtgctgctgacgccgttccgctggatgacggtgccgccc
cccatggccgcgttccacctgcagctgccgctcgcggcggagcgggcctccttctgcccg
gagagcggccgcgccgacgacgtcgccgtgctgctgtgcgaccggcgccgcgtgctcgtg
tacgcccacggcggcggcgccggcggcaacggcagcgccgcgccagaccccaccgtgcgc
ctcgggcaggcctgcggcaacggcttcaggactcgcgtgggcctgccttcgctcgtcagg
acgtacaggattcgggagagcgatcgtgcggaaggaggagagacgggggggtcgtcgccg
ccgccgccaccgtcgatgcgaggattccgcgagttcacgtggctcgggcgggatcgcttc
ctggccgtgagccagggctcctccctgtgccgctccgtcgtgatgctgctcaggggctcc
ccgctggagcaaggcggcgaggaacccgccgaggagacgctcacagccgccggctcggcg
ctggagctgcacgggcgggtgctgagcgtgacgctcgtccctggcggcgactccgctctg
ctgcagctctccaacggggagctcctgcgctgctgccacgccgttgagccgctgagcgtg
gaggcgtggaccgacgcgcggggccgtcccgtgtcgttcccggtgccctgcgtgcacgtg
gaggtgtgcaccatggcggggcaggaagttgccctgggtcttactgagcggtcaaggctg
ttcgccaacgacatcgaggtggcgtccaactgcacgtcgttctgcgtccacccggagctg
ctgctgttcaccacgcgcctccacacgctgcgctgcgtgagccgcctcgcccccgtcgca
gccctggccggactgccctcaggaggcgatctcccgggagacgagacggtgcggcgcgtg
gagcggggctcgcgcatcgtcgccatcgtcccctccgactgcagactcgtgctgcagatg
ccgcgggggaatctggagacgattcagcccagggctctgctcttgtcgcaggtgcgcaag
tggctggacagcctgaagttcaaggaagctttcgagtgcatgaaaaagcagaggataaac
ctgaatcttctctacgatcacaaccccaaggcgttcatggacaacattggggaatttctg
acgcaagtgcagtccgccggcaacgtcaacttgttcctcaccgagctcagggacgaagac
gtcgcgcggaccatgtaccctgtgccatacggctgggcgcaaccgcctgccgccgtcgcc
accggcacagcaaccgccaccgtcgccgccgaggcccgggcacgcagcaccgacaaagtg
aacgccgtgtgcgacggcctgcgggcagccatggaggccctggacccagacaggtttttc
ctgtccattctgactgcgctggtgagaagaaaggagcccgacgtggagacggctctgatg
cgagtccgcgacgtggccgagcgagcagcggagggggcggcgggcgacggaggtgcggag
gaggcggagaggagggcgcaggaggcgctgggctacctgctgctgctcgtggacgagggc
gagctgtacgagtgcgcactcggcacctacgacttccgcctcgtgctcatggtcgctcag
cgctcgcagaaggaccccaaggaatacctgcccttcctgaacgacctcaagaagatggag
acgaactaccagcgctacagcatcgacaatcacctcaagcgctacggcaaggccctggtg
catctgagccgatgcgggcgggaccgcttccccgagctgctgagcctggtgcggagccgc
gtgctctacagggaggcgctccgtctcttcccgtgcggcggcgaggagtacacggctctg
agcgaggcgtttggtcgccacctgctggaggagcggcacctgggtgccgaggccggcctg
gtgtttgctcgcgccgcgctgtggcaggcggcgctgtccgcgttccgtgacgccggctgc
tggcgccaggcgctgtgcgccgccacgagcctcggctacccggcgctggagctgacgcgg
ctcgcgcgcgacatggccgaaaaattggccgcacagagaaagcacgtggacgctgcctgt
ctcctggagcagtatgcagaggaccacgaagaagcggtggtgacgctcacggagggagga
gcctgggaggaggccatgcggctgatccacaaacacaaccgactggatctgctggagacc
aacctgaagccggcggtgaaggaagcgcacggccagcagatggccagcgtgagggcgcag
gcggcgctgtttgagcgccacgtggcgcggctcgccgtggttcgggccgacaaggagcgg
gcgcgacacgacctcctggccgatggaggaaacgacgagggaccggagtgcgatttgtac
tcggacgcgagcagcgttgcgagcagcgttgcgagcagcggagtgctcagttccaagtac
tcgcagagcaactcgcgcatctccgggcggtcgtccaagaaccgcaggaaggcggcgcgc
aagcggcacagcctgcgggagggcagccccagcgaggagccggccctgctgggcgccatc
ggcgacatcgcgcgcgccgtcgacgccagcacagccgaggtggggcccctgctgaggatg
ctgctgctcttcgattgggagtccgagggtctggagctccaggccgagctgagttccctt
ctgctgcgggtcgagagggcccttcctgaagtgtggcctccgacggccgcgtcagtcgct
ccggtgtttggaccggactcaactgtgaacagcattgcagcgtctctgagtcagcccagg
gaaacgagccttggtcaggaagacgacgaatctctcaccgctccgcggctcagcaggagc
accgagtggaagctgcgttcgctggacccggcgagcgtttga
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