Lethenteron reissneri (Far Eastern brook lamprey): 133354168
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Entry
133354168 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
133354168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133354168
Membrane trafficking [BR:
lrj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133354168
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
133354168
RAVE complex
133354168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
WDR55
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_VPS8
ASA1
Frtz
Protamine-3
Motif
Other DBs
NCBI-GeneID:
133354168
NCBI-ProteinID:
XP_061426779
LinkDB
All DBs
Position
46:11682630..11746014
Genome browser
AA seq
2671 aa
AA seq
DB search
MKLHQVLTGAVNPGENTFSVGLLDGAAFTAYASGCDIVILGSNFERVQIIPGSKHGNIQV
GCLSCSARLGKIAASYGDTVSIFEPFPLINKASNPLGLQWHKTGQLKVPSAVLDLAWDPQ
ADSLLTASSSLQLWSCSPGSEVAVDSPTSESALTGCVWAAVWTCRTALPVTQIKFSPDGY
FFATTGKNDCLVKVWYRTDGWHACRVVGVSGGGSCTDPVVMPTERPAFSFAYLAHPRAVT
SLSWRKTSTYLPRGAACNTLLTSCRDGICRVWLETVLPEDCLQECPAVSGHGARGEPPPS
VRLAAAAGPRGKAQRERMHHVLGSFQQLKMLKRRKRTLQRDGLGSVLAEALPGSPALPRQ
PRILAHFHIAASINPKTDIPLMPAMGCPGVDGDGPPFVVHWLNNKYLQFTLSLECLLQQL
QPPAPSGGSRGGSGRAADAGSRGSRGSQEEASGEVGGRDAPDGNSDNHSSSRESEDGICS
LDDGSEKESDTPTGTAPRRPPGISTTTNTTLTATAAVAASTPADGSGPPGGTGKPKHAGA
AGAAWQVENGLDWLVRDWQSAPDMLYSVHALDGSFLVWHVDWLDESQPGVFKQVQVCFSS
RIPVAFPAGDAHSMGKHMYLYACPSGARHAGDPTAGTSPHHPRYYSSSSSFSSVPRSSSG
HLISSSLGRNLGSCGSIGSIGGGMGGPFGALLVPPSVKLVTKHADGSLNQWAVCFGEDAA
FRTVLGISHQSRYCGHRFRLTGQACHAVLPLLLTTAHHAPRDDAPPDGRSSPRPSPTDDV
ARKQPSGRFVRREAGGSSGRSPGGSPGDAFAGPAMTRRSRRGEGGGGTCGPPGRQLRRLM
SDCDVLAVRSELILWRVDPVGPLSHTGGVLELARINCASEDAFAHMAWLPTTVPGYCLGT
YCNSPSSCFVASDGWNLRLYQAVIDARKLLDELSKPQLSRLVGDVFSIVSQQSTARPGCI
IELDVITEQCPSSTQFLHVFSEELILGRRSKDTEEGDGSNPASGAGPGRAPQFSERFFLV
SIERAEGGQSLLKMWSLHLTSVQALAGTQSVDACGLRFLLAVRLHSFLLSSLPPLHRAQL
QHQGLSTCHFAWAFHSTSQEDLLGLLPTMQRADGPTWAELRAMGVGWWLRGRAALRLCME
KLAKVAFQRNNDPLDAALYYLAMGKKGVLWGLFRSKGDSKMTQFFSNNFTEERWRSAALK
NAFALLGKRRFEQAAAFFLLAGALRDAIEVCLEKLNDIQLALVVARLQEANTDAPATYQS
ILGCRVLGRNEVSGADAAATPELAELTRACELRKDRDPFLRSIACWVKSDYSGALDALLE
QPDSACDADEDGGSGGSGGGSASPGLCSPGVFNFYNFLRGHPLIVRHHMLSHGGAGQRPA
DTISLRERRLFFATASTHLKSGCPLLALDVLRRMPHAEKEVVTVASARGGGRLPLENGHV
HGGGSAWGTAGAHPSSGHHTAESADWASSAMTVADEPLELSWDSEEDEEEEEDEEDDDDE
DQGITMKKTRAFKKGTADVVESDAEKRPESLPPAPPGTDGYVDVMAEQMKFRACLKLLVD
ELRTLATGYEVDRGKLHVQLCHWLEREVATLQEVCGYPGDLHGTAAGSLDTVAEDAGSKL
SGATDACPFIGGGGSGGVTPDDTEAWREQHSLRARQLHAARRRQWLCANLPLLHMFLGYC
SLHGAQGGGLASVRVELLFLIQESQQEAVLKQLHSRLPLPTVLPLISASLATLKTVISNP
VLHVANLAHDILRTVSDMPAPPEPPKDNPQVHMIYVLAASLSACVYQSLCDSHSFSSEAA
SCPFTGLSYKSCLLRERLRQRHESTSNLQSTSLPSQWPGVTQLLSQLHACRDEEQPPLRM
LLCEALLAVFLGMLARALATNAAGRLYRLSARPLDARSWASLFGGAARVPQCATPSPAQT
LAPPQQQAPSSSSSKGNSTAEAVKTQQGSTRNRAQQQSETSSSGGRVRADEASKHRHRLN
MRILVTSPSPPSTAAPTQRAVVSTVSGSSGGGGGAGGSVELGGSWAQSPLTPCANFREVF
VPPELSIWDYYMAKPFVASDDGLGYDSDESEESEEEEEEEDEGDEEADYDPILDKDDERA
SRRRSREREHSDPNSYSWCLMRLVVVRLAITNMRGFFPMAGLEMSDLPSCSPLCHMALCT
LSQWEQALCARLEATPGPPDDYIPTLGAHTGDGPAGPAILRYKAMLEPGNTPFSSHRRSA
LAAKRLWQFLVRHESMQETFIRHIFTRAHHRHQQQQQQEEESSSSGNLNYVTEDHGSNRT
ELSAGSPITRARIVHKETDIITAFAINRANPSCLAAASAHEVLELDLSSILSSSCQAWVE
EESESEGSSNEDFLVVYTKDDAFRSPSIGSFHTSSPYTPSSTGTTSSVGGQTGRGPTMLL
RRNLSNVRRMASHPILPYYVTGGQDGSVRVFEWGHAEQLQVMRPAPAPRVTRLRFCAQSN
RKFGVTDGDGFLSLWQLDLTNKNPKPYLTLKCHSRDTFDFTFLGSSSVVATAGQSSDGRN
VRLWDTLVPHRSSLVHGFQCLEAGATVLGYAPRSQTLIVGGRKGHVTLLDLRQRVARHTV
QAHESAVKAIAVHPGEGFFLTGSAEGNIKVWSLPAPTLISTYANEHARQSIFRHLGAGVM
QIETGPGRHVFSCGADGTIKTRVLLQHSGGW
NT seq
8016 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcaccaggtgctcacgggcgccgtgaaccccggggagaacaccttctccgtg
gggctcctggacggcgctgcgttcacggcctacgcgtctggctgtgacatcgtgatcctc
ggcagcaactttgagcgcgtgcagatcatcccgggctccaagcatgggaacatccaggtc
ggctgcctcagctgctccgcgcgcctcggcaagattgcagcatcttatggagacaccgtt
tccatctttgagcctttcccgctcatcaacaaagcaagcaaccccctcggcttgcagtgg
cacaagacagggcagctcaaggtcccatccgcggtcctggatctggcatgggaccctcag
gccgattctctgctcaccgcctccagctctctgcagctgtggtcgtgctccccggggtcg
gaggtcgcagtggacagccccacgagcgagtcggcgctcacgggctgcgtctgggcggcc
gtctggacgtgcaggaccgcgcttcctgtcacgcaaatcaaattctctccggatggatat
tttttcgctaccactggcaagaacgactgcctagtgaaggtgtggtaccgcacggatggg
tggcacgcgtgccgggtggtgggcgtctccggcggtggcagctgtacggaccctgtggtg
atgccgacggaacggccggcgttctcgtttgcgtacctggcgcacccgcgtgccgtcacc
agcctctcctggaggaagaccagcacgtacctccccaggggcgccgcctgcaacacgctg
ctcacgtcgtgtcgcgacggcatctgccgcgtgtggctggagacggtgctgcccgaggac
tgcctgcaggagtgcccggccgtgagcgggcacggcgcccgcggggagccgccgccgtcc
gtgcggctggctgcggccgcggggccgcgcgggaaggcccagcgggagcgcatgcatcac
gtgctcgggtcgttccagcagctcaagatgctgaagcgcaggaaacgcacgctgcagaga
gacggcctcgggtcagtcctggccgaggccctgccagggtcgcccgcgttaccacggcaa
ccgcgcatcctcgcccacttccacatcgccgccagcatcaaccccaaaacagacatcccg
ctgatgccggcaatgggatgcccgggagtggacggcgacgggcccccgttcgtagtgcac
tggctgaacaacaagtacctgcagttcacgctctcgctcgagtgcctcctgcagcagctg
caaccgccggcaccgtcggggggcagcaggggcggcagcggcagggcggccgacgctggg
tcacgggggtcacgggggtcgcaggaggaggccagcggagaggtcggcggccgcgacgcc
ccggacggcaacagcgacaaccacagttcgtcccgcgaatccgaggacggcatctgctcg
ctggacgacggctctgagaaggagagcgacacccccaccggcacggcgccgcgccggccc
ccaggcatcagcaccaccaccaacaccaccctcaccgccaccgcggcggtggcggcgtcc
accccggcagacggctcggggccgccgggcggcaccgggaagcccaagcacgcgggcgcg
gccggggcggcgtggcaggtggagaatggacttgactggctggtgagggactggcagagc
gcgcccgacatgctgtacagcgtgcacgcgctggacggctccttcctcgtgtggcacgtc
gactggctcgacgagagccagcccggcgtcttcaagcaggtgcaggtctgcttctcctcg
cgcatccccgtcgccttccccgctggcgacgctcactccatgggcaagcacatgtacctg
tacgcgtgtcccagcggcgcccggcacgccggagaccccaccgccggcaccagccctcac
cacccgcgctactactcctcctcctcctcgttctcctccgtgcctcgcagctcctccggc
cacctcatctcctccagcctcggccgcaacctcggcagctgcggcagcatcggcagcatc
ggcggcggcatgggcgggccctttggcgcgctgctggtgccgccctcggtgaagctggtg
acgaagcacgccgacggctcgctcaaccagtgggccgtctgcttcggcgaggacgccgcc
ttccgcaccgtgctgggcatctcgcaccagtcgcgctactgcggccaccgcttccgcctc
acggggcaggcgtgccacgccgtgctgccgctgctgctcaccacggcgcaccacgccccg
cgcgatgacgcgccgcccgacggccgctcttcccctcgaccgtcgcctacggacgacgtc
gctcggaagcaaccgagcggtcgcttcgtgcgaagggaggcgggcgggtcgtcgggcagg
tcgccgggcgggtcgccgggcgacgcgtttgccggcccggcgatgactcggaggagccgg
cgcggcgaaggcggcggcggcacctgcggaccgcccggccggcagctgcggcggttgatg
agcgactgcgacgtgctggcggtgcgcagcgagctcatcctgtggcgcgtggaccccgtg
gggccgctgtcccacacgggcggcgtgctggagctggcgcgcatcaactgtgccagcgag
gacgcttttgcgcacatggcgtggctgcccaccaccgtgccggggtactgcctcgggacg
tactgcaactccccgagctcgtgcttcgtggcgtcagacggctggaatctgcgcctgtac
caggccgtgatcgacgcccgcaagctgctcgacgagctctccaagccgcagctgtcgcgt
ctggtgggcgacgtgttcagcatcgtgagccagcagtcgaccgctcggcccggctgcatc
atcgagctggacgtcatcactgaacagtgcccatccagcacgcagttcctgcacgtcttc
tcggaggagctcatcctcggtcggcgctccaaggacacggaggagggagacggatccaac
ccggcgagcggtgccggtcccggccgggcgccgcagttttccgagaggttcttcctggtg
tccatcgagagagctgagggagggcagtcgctgctcaagatgtggagcctccacctgacc
tccgtgcaggcactcgccggtacgcagagcgtggacgcgtgcggcctgcgcttcctgctc
gccgtgaggctgcactccttcctgctctcctccctgccgcccctgcaccgagctcagctt
cagcaccagggcctgtcgacgtgccactttgcgtgggcgttccactccacgtcgcaggag
gacctgctgggcctgctgcccacgatgcagagggcagacggccccacgtgggcagagctg
cgcgccatgggcgtgggctggtggctcaggggacgcgccgccctgcgcctctgcatggag
aagctggcgaaggtggcgtttcaacgcaacaacgatcccctggatgccgccctctactac
ctggccatgggcaaaaagggggtcctgtggggtctgttcaggtcgaagggcgactcgaaa
atgacccagttcttcagcaacaacttcacggaggagcggtggcgcagcgccgcgctcaag
aacgccttcgcgctgctcggcaagcggcgcttcgagcaggcggccgccttcttcctcctg
gccggggcgctgagggacgccattgaggtgtgcctggagaagctgaacgacatccagctg
gcgttggtcgtcgcgcgactgcaggaggccaacacggacgcaccagccacctaccagtcc
atcctggggtgccgcgttttgggccgaaacgaggtgtcgggggccgatgccgccgcgacg
ccggagctcgccgagctgacgagggcctgcgagctgcgcaaggaccgcgatccctttcta
cgcagcattgcatgctgggtaaaaagcgactactccggagccctggacgcgctgctggag
cagccggattctgcttgcgacgccgacgaagacggtggtagcggcggcagcggcggcggt
agcgcctcgccgggcctgtgcagcccgggcgtcttcaacttctacaacttcctgcgcggc
cacccgctcatcgtgcgccaccacatgctctcccacggcggcgccggccagcggcccgcc
gataccatcagcctgcgcgagcgccggctgttcttcgcgacggcgagcacccacctcaag
tcgggctgcccgctgctggcgcttgacgtgctccggcggatgccgcatgccgagaaggag
gtggtgaccgtcgccagcgccaggggcggcgggagattgccattggaaaatggacacgtg
cacggtggcggcagcgcgtggggcacggcgggcgcccacccgtcgagtgggcaccacacg
gcggagagcgccgactgggccagctcggccatgacggtggcggacgagcctctggagctg
agctgggacagcgaggaggacgaggaggaggaggaggacgaggaagacgacgacgacgaa
gaccaggggatcaccatgaagaagacgagagcgttcaagaagggcaccgccgacgtcgtg
gagagcgacgcggagaagaggccggagtctctgccgcctgcgccgcccggcacggacggc
tacgtggacgtgatggcggagcagatgaagttccgtgcgtgcctcaagctgctcgtggac
gagctgcgcacgctggcgacaggatatgaggtggacagaggcaagctgcacgtgcagctg
tgccactggctggagcgcgaggtagccacgctgcaggaggtgtgcggttaccccggcgac
ctgcacggcaccgccgccggctcgctggatacggttgccgaggacgccggatcaaagttg
tccggcgccacggacgcttgtccctttattggcggtggtgggagcggcggggtgacgccg
gacgacacggaggcttggcgcgagcagcacagcctacgtgccaggcagctgcacgcggcg
cgccggcgccagtggctgtgcgccaacctgccgctgctgcacatgttcctgggttactgc
agcctgcacggcgcgcagggcggcggcctggcctccgtgcgcgtcgagctcctcttcctc
atacaggagtcgcagcaggaggcggtgctgaagcagctgcactcgcggctgccgctaccg
accgtgctgccactcatctcggcgtcgctcgccactctcaagactgtcatttccaacccg
gtgctgcacgtcgccaatcttgcgcacgacatcctgcgcaccgtcagcgacatgccggcg
ccccccgagccacccaaggacaacccgcaggttcacatgatctacgtgctggccgcgtcg
ctctccgcgtgcgtttaccagtccctctgcgacagccacagcttcagcagcgaggctgcg
agctgccccttcacggggctctcctacaagagctgcctgctccgcgagcgcctgcgccag
cgccatgagagcaccagcaacctgcagtccacctccttgccctcccagtggccgggcgtg
acgcagctgctgtcccagctgcacgcgtgccgcgacgaggagcagccgccgctgcgcatg
ctgctgtgcgaggcgctgctcgccgtcttcctcgggatgctggcacgcgccctcgccacc
aacgccgccggccgcctctaccgcctgtcggcgcgcccgctggatgcacgctcgtgggcg
tcgctgttcggcggcgccgcccgcgtgccccagtgcgccacgccctcaccggcgcagacg
ctggcgccgccgcagcagcaggcgccgtcgtcgtcgtcctctaaagggaattcaacggcg
gaggcggtgaagacgcagcagggcagcacgcgcaaccgtgcgcagcagcagtcggagacg
tcgtcctctggtggccgggtccgggcagacgaggccagcaagcaccggcaccggctcaac
atgcgcatcctggtgacgtcgccgtcgccgccaagcacggccgcacccacgcagcgcgcg
gtcgtaagcacagtgtccggcagcagtggcggcggcggcggcgccggcggcagcgtggaa
ctgggcggctcgtgggcgcagtcgccgctcacgccgtgcgctaacttccgtgaggtgttt
gtgccacccgagctcagcatctgggactactacatggccaagccatttgtggcgtccgac
gacggcttgggctacgactctgacgagagcgaggagagcgaggaggaggaagaggaggag
gacgagggagacgaggaggccgactacgacccgatcctcgacaaggacgacgagagggcg
tcgcggcgccgctcccgcgagcgcgagcactcggaccccaactcctacagctggtgtctc
atgaggctggtggtggtgcggctggccatcacaaacatgcgcggcttcttccccatggcc
ggactcgagatgtcagacctgccgtcgtgctccccgttgtgccacatggcgctgtgcacg
ctgagccagtgggagcaggcgctgtgcgcgcgcctcgaggccacgccgggccctcccgac
gactacatccccacgctgggggctcacacgggcgacgggcctgccggaccggccatcctg
cgctacaaggccatgctggagccaggcaacacgcccttcagttcgcatcgccgctcggca
ctggcagccaaacgcttgtggcagttcctggtgcggcacgagtcaatgcaggagaccttc
atcaggcacatcttcactcgcgcgcaccaccgccaccagcagcagcagcagcaggaggag
gagtcctcctcatccgggaacctcaactacgtgaccgaagaccacggaagcaacaggacg
gagctgagcgccggctcccccatcacgcgagcgcggatcgtgcacaaggagactgacatc
atcaccgccttcgccatcaaccgggcgaatccgtcttgcctggccgcagcctcggcccac
gaggtgctggagctggacctgtcgtccatcttgtcgtcgagctgccaggcctgggtggag
gaggagtccgagtcggagggcagcagtaacgaagacttcctggtggtctacacgaaggac
gacgcgttccgcagccccagcatcggcagcttccacacgagcagcccctacacgccgagc
agcacgggcaccaccagctcagtcggcggacaaacgggcagagggcccaccatgctcctg
cggcggaacctgagcaacgtgcggaggatggcgagccacccgatattgccgtactatgtg
acgggcgggcaggacggcagcgtgcgcgtgttcgagtggggtcacgcggagcagcttcag
gtcatgaggcctgcgcccgcgccccgcgtcacccgcttgcgtttctgcgcccagagcaac
cggaagtttggggtgaccgatggtgatggcttcctcagtctgtggcagctcgacctcacc
aacaagaaccccaagccctacctgaccctcaaatgccacagccgcgacacctttgacttc
acttttctgggctcctccagcgtcgtggcaaccgccggacagtcgtccgacggccggaac
gttcgcctgtgggacacgctggtgccgcacaggagcagcctggtgcacggcttccagtgc
ctggaggcgggcgccacggtgctgggctacgcgccccgcagccagacgctcatcgtgggc
ggccgcaagggccacgtgacgctgctggacctgcggcagcgcgtggcccgccacacggtg
caggcccacgagtcggccgtgaaggccatcgcggtgcaccccggcgagggcttcttcctc
accggctccgccgagggcaacatcaaggtgtggtccctgccggcgcccacactgatcagc
acctacgccaacgagcacgcccgccagtccatcttccggcacctgggcgccggcgtgatg
caaatcgagacggggccgggccgccacgtcttctcctgtggcgccgacggcaccatcaag
acgcgcgtgctgctgcagcactcgggcggctggtga
DBGET
integrated database retrieval system
