KEGG   Lethenteron reissneri (Far Eastern brook lamprey): 133354179
Entry
133354179         CDS       T09663                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
lrj  Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lrj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133354179 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrj03400]
    133354179 (APTX)
Enzymes [BR:lrj01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     133354179 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     133354179 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     133354179 (APTX)
DNA repair and recombination proteins [BR:lrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     133354179 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     133354179 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT
Other DBs
NCBI-GeneID: 133354179
NCBI-ProteinID: XP_061426798
LinkDB
Position
46:8827712..8839337
AA seq 370 aa
MQSCWLVSGDSRHEPIALPDGTTVVVGRCRLTRINDTRCSRQQISVQAIYSKRVVLIKQL
GVNPTSIETVELGHHGEAELRPGQTLHVVNASYPMHVEFRGPASPPPSTLASTSASASAP
SPTTSPSGRPSHVPKRAWHSPSGSDSQAGSIRKFLKFVGGKDHAKDNSPSVSPTKGNAQK
SPTGQRGQPAHWSQSLRDAMDDPSVQIFRDEQVVVILDKFPKARHHWLVLPWRFVANVSV
LRADHLPLLRHMHDVAERLSRQVQPLGAATAPPTFRLGYHAIPSMSRIHMHVISQDFDSP
RLKTKKHWNSFTTGYFIDSEVVMRMVEEDGRVVIPEDTAELLKKPLQCHMCHRDISTIPK
LKEHLGTHKL
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgcagtcctgctggctggtgagtggcgactcgcgacatgaacccatcgcccttcccgat
gggaccacggtggtcgtgggcagatgtcgactcaccaggatcaacgacacgagatgctcg
cggcagcagatttcagtgcaggcaatttactccaaaagagtggtgcttattaaacagctg
ggcgtgaatccgacgagcatcgagacggtcgagctgggccaccacggcgaggccgaactt
cggcccgggcagacgctgcacgtcgtcaacgcctcctacccgatgcatgtcgagttccgc
ggtccggcctcccccccgccctccaccctggcctccacttcggcctccgcctcagccccg
tccccgaccacgtcgccatcagggcgaccgtcccatgttcccaagcgtgcctggcactcc
ccgtcggggtcggacagccaggcgggatccatcaggaagttcctgaaattcgtcggcggg
aaggaccacgcgaaggacaactccccgagcgtgtcgccaaccaaggggaacgcgcagaag
agtccgaccggccagcggggtcagccggcccactggagtcagagcttgagggacgccatg
gatgacccgagcgtgcagatcttccgcgatgagcaggtggtggtgatcctcgacaagttc
cccaaggcgcgccaccactggctcgtgctgccctggcggttcgtggcgaacgtgagcgtg
ctgcgcgccgaccacctgccgctgctgcgccacatgcacgacgtggccgagaggctgtcc
cgccaggtgcagccgttgggcgcggcgacggcgccgccaacgttccgcctggggtaccac
gccatccccagcatgagccgcattcacatgcacgtcatcagccaggacttcgactcgccg
aggttgaaaactaagaagcactggaactctttcaccacgggttacttcatcgactcggag
gtcgtgatgcgcatggtggaggaggacgggcgtgtggtgatacccgaagacacggcggag
ctgctgaagaagcccctgcagtgccacatgtgccaccgcgacatctccaccatccccaaa
ctcaaggagcacctgggcacacacaagctgtaa

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