Lethenteron reissneri (Far Eastern brook lamprey): 133354208
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Entry
133354208 CDS
T09663
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133354208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrj02000
]
133354208
Transporters [BR:
lrj02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
133354208
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LD_SV2
MFS_1
Sugar_tr
Pentapeptide_4
MFS_2
Pentapeptide_3
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
133354208
NCBI-ProteinID:
XP_061426851
LinkDB
All DBs
Position
46:10609857..10655713
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AA seq
734 aa
AA seq
DB search
MEEARDRPAFLQGARDIAREVKRQAAKKVGRGSDQIQDQYTRRSYSRFTGDEDDDEDEDW
RADARDARSDGRPPPPGAKGDSNEEGSSDATEGHDDEADAEGYEGEYQGASDGVKVAHAT
EPSKSASWDTEAGRRSDREELSQQYELILQECAHGKFQWSLFFTLGLALMADGVEMFVVG
FVLPSAEKDMCLSSQNKGWLGGFVYVGMMLGAVFWGGLADKIGRRQCLLISLSFNGFFTC
LSSFVQGYGAFLFCRFLSGIGIGGTAPVVFSYFAEFLSREKRGEHLSWLCMFGMIGGIYA
SAMAWAIIPHYGWSFSMGSAYQFHSWRVFVIVCALPAVSSVVALTFMPESPRYLLEMGRH
DEAWMVLKQVHDTNMRAKKQPEKVFTVTQIKMLKQQDEMVEIETSTAIWYRRWIARVLSQ
LKAIWRTLKQCFEPQLKRTMMQLVAVWLLLSFGYYGLSVWFPEMIKQLQADNYASHLKEF
DKERVTDQTFNFTLENQVHRDGEYINDRFVKIKFKHVIFENSLFKNCDFDDITSTNTFFK
NCTFIGTTFYNTDLYDFKFVNSRLINSTFLHNKKGCHIDFSSDYSAYWVYFVTFLGTLAV
LPGNIVSALLMDKIGRLNMLGGSMVLSGISCFLLWFGNSEATMIGMLCLYNGLTISAWNS
LDVLTVELFPTDRRATGFGFLNALCKAATVMGNLIFGSLVSITKAIPILLASSVLVAGGL
VSLRLPDTRNQVLM
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgagggaccgtcccgcgttcctgcagggggcgcgcgacatcgcacgcgag
gtgaagcggcaggcggccaagaaggtcggacgcggctccgaccagatccaggaccagtac
acgcggcgctcgtactcgcgcttcacgggcgacgaggacgacgacgaggacgaggactgg
agggcggacgccagggacgcgcgcagcgacgggcggccgccgcctcccggcgcgaagggg
gacagcaacgaggagggttcgagcgacgccacggaggggcacgacgacgaggcggacgcg
gagggatacgagggggagtaccagggagcctccgacggggtcaaggtcgcccacgccacg
gagccgagcaagagcgcgtcctgggacacggaggcgggcaggcggagcgaccgcgaggag
ctgtcgcagcagtacgagctcatcctgcaggagtgcgcccacggcaagttccagtggagc
ctcttcttcacactggggctggcgctcatggctgacggcgtcgagatgttcgtcgtgggc
ttcgtcctgcccagcgccgagaaagacatgtgcctctcgagccagaacaagggatggctc
ggcggattcgtgtatgtggggatgatgctgggcgccgtgttctggggcggcctggccgac
aagatcggccgtcggcagtgcctcctcatctcgctctccttcaacggcttcttcacctgc
ctctcgtccttcgtgcagggatacggggccttcctcttctgccgcttcctgtcgggcatt
gggatcggcgggacggctccggtcgtcttttcgtactttgcggagttcctgtcgcgcgag
aagcggggcgagcacctgagctggctgtgcatgttcggcatgatcggaggcatctacgcg
tcggccatggcctgggccatcatcccacattatggctggagcttcagcatgggctccgcc
taccagttccacagctggcgagtgttcgtcatcgtgtgcgcgctgcccgccgtctcctcc
gtcgtggcgctcaccttcatgcccgagagcccgcgatacctgctcgagatgggcaggcac
gacgaggcctggatggtgctcaagcaagtccacgacaccaacatgagggccaagaagcag
cctgagaaggtcttcaccgtgacccagatcaagatgctgaagcagcaggacgagatggtg
gagatcgagacgagcacggccatctggtaccgccgctggatcgcgcgcgtcctctcgcag
ctcaaggctatctggcgcacgctgaagcagtgcttcgagccgcagctgaagcggacgatg
atgcagctcgtcgccgtgtggctcctgctgtcgtttgggtactacgggctgagcgtgtgg
ttccccgagatgatcaagcagctgcaggccgacaactacgcgtcgcacctgaaggagttc
gacaaggagcgggtcaccgaccagaccttcaacttcacgctggagaaccaggttcaccgc
gacggggaatacatcaacgaccggttcgtcaaaatcaagttcaagcacgtcatcttcgag
aattccctcttcaagaactgcgacttcgatgacatcacctccacgaacacgtttttcaag
aactgcaccttcatcggcaccacgttttacaacacagatctctatgacttcaagttcgtg
aacagccggctgatcaacagcacgttcctccacaacaagaagggctgccacatcgacttc
agcagcgactacagcgcctactgggtctacttcgtcaccttcctgggcaccctcgccgtg
ctgcccggcaacatcgtctccgcgctgctcatggacaagatcggccgcctcaacatgctg
ggcggctccatggtgctgtcggggatcagctgcttcctgctgtggttcggcaacagcgag
gcgaccatgatcggcatgctgtgcctctacaacggcctcaccatctccgcttggaactcg
ctcgacgttctcaccgtggagctcttccccaccgaccgcagggccacggggttcggcttc
ctgaacgcgctctgcaaggcggccacggtgatggggaacctgatcttcggctcgctcgtc
tccatcaccaaggccatccccatcctgctggcgtccagcgtgctcgtggccggcggcctc
gtctcgctgcggctgcccgacacgcggaaccaggtcctcatgtga
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