Lethenteron reissneri (Far Eastern brook lamprey): 133354264
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Entry
133354264 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04120
Ubiquitin mediated proteolysis
lrj04144
Endocytosis
lrj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133354264
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133354264
09144 Cellular community - eukaryotes
04530 Tight junction
133354264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133354264
04121 Ubiquitin system [BR:
lrj04121
]
133354264
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133354264
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133354264
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
HECT type E3
133354264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
VPS13_M
Motif
Other DBs
NCBI-GeneID:
133354264
NCBI-ProteinID:
XP_061426952
LinkDB
All DBs
Position
46:9112157..9235619
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AA seq
1428 aa
AA seq
DB search
MAQRLRLRFAAGRSHTDPSSDADRDERASDALMGLCSAPRRCASVQLTPSRPDSSPPPSA
RALEPPRLKRSSSMFIPQLATSCGDSRPRRKKSTSVQISLQRRPANGAAAGGPADGEAGA
AGTAVAAGDGDGASGRAVAAACAAAATPPDPPRDLALSRTEARDVTPAESKFPDIADVPG
GRLALPGARLGEVRVVTVPCEPWPARPASAPAAESGRLRRCSSLLIFPRSPSITPPPSPT
AAESPALAPTPGQPQQAQQQQQQPIQQQPIQQSTQQQQQPSCDAAVCSTRRVLHLPPFQM
PAKLGHIAEHGPAPTDSPPGADAISVDLLPGASGNGFRLKRHSAAGEVHRIRVLPLRCRP
RQATADGHAAAAGAATPPARHLPARPSAPAPGSTRPASCRPKDGGGGGAGKQSRFVVQLH
KPPAAEPCASGDGGDFLAGKPAAYPRARLRRSTSACLLPAQEDAGERGHRLLGAEAEGER
AADVGRGRADYPQLLRSRSFDGISPSPPPSPVFHVEQEMIGGSPHLRITVTRGGDARGRA
PGSSVVRDCGGVTPEGTIVISSRNHCKTRDDFLGQVDTSLSQLPTEDPSRERPYTFRDFI
LRPRSHKSRVKGFLRLKMAYLPQNGMNEEPSTQTEDSDPGWEVVDSMEGGVSQRPSQQQQ
QPALPPDWEERQDNLGRTYYVNHKNRSTQWHRPTVLDPVEDVQATEERSDQQAQTVFCSR
RQITEDSDSGDVRDSADLTWEIIEPESDRSPRSPLPPPPSPTTTTTTDGARLVSSDEAGL
RPQSPAERTTPATVLASRRARSASVTLSEPQQNNTLLVPQLFTTPGMPPGWEERKDDKGR
TYFVNHNNRTTTWTRPVMQLVDDGVPVAGAVAPANGEAEVQVQVRRPRSLSSPSSPRELL
PLHSLQNLREATQPKRNRVPFPSPQSPQFSPDDSPLGSPKQQHKPSSGTAFMPPGWEMRF
APNGRPFFIDHNARTTTWDDPRLKVPVHMRTRPSLDPSELGPLPPGWEERVHTDGRTFYI
DHNTKNTQWEDPRLQSPAITGPAVPYSRDYKQKYDFFRKKLKKPTDVPNRFEMKLRRGSI
LEESYRRIMAVKRTELLKARLWIEFETEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSA
TDNYTLQINPNSGLCNEEHLSYFKFIGRVAGMAVYHGKLLDGFFIRPYYKMMLQKPITLT
DMESVDSEYFNSLMWILENDPTDLDLRFCIDEELFGQTHQVELLPNGSEIVVTNDNKKEY
IDLVIQWRFVSRVQKQMNAFMEGFCELIPMDLIKIFDENELELLVCGLGDVDVNNWRQHT
VYKNGYCANHPVVQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTV
EMWGAPEKLPRAHTCFNRLDLPPYESFEELRERLNMAIENAQGFEGVD
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcggctccggctgcgtttcgcggccgggcgaagccacacggacccctcgtca
gacgccgaccgcgacgagagggcgagcgacgcgctcatggggctctgctcggctccccgc
cgctgcgccagcgtgcagctcacgccctcgcggcccgactccagccccccgccgtcggcg
cgcgccctcgagccgccccggctcaagcgcagctcctccatgttcatcccgcagctcgcg
accagctgcggcgacagccgcccgcgccgcaagaagagcacctccgtgcagatctcgctg
cagcgccgcccggccaacggcgctgccgccggcggaccggcggacggggaagccggggcg
gcgggaacggcggtcgccgccggggatggggacggagcgagcgggcgagcggttgcggcc
gcctgcgcggcggcggcaacgccgccggacccgccgagggacttggctctttcgcgcacc
gaggcgcgggacgtaactccggccgagtctaagtttcccgacattgccgatgttcctgga
gggaggctcgcgctgcctggcgcgcgcctgggcgaggtgcgcgtggtgacagtgccgtgc
gagccctggcccgcgcggcccgcgtcggcgccagcggctgagagcggacgcttgcgacgc
tgctcctcgctgctcatcttccccaggagccccagtatcacgccgccgcccagccccact
gccgccgagtctccggcgctagcgccgacaccgggacaaccgcagcaagctcagcaacag
caacagcagcccatccagcagcagccaatccagcagtcgacgcagcagcagcagcagccg
tcgtgtgacgcagcagtctgctccacccgcagggtgcttcacttgcccccgttccagatg
cccgcaaagctcggccacatcgccgagcacggcccggcgccgacggactcgcccccgggc
gccgacgccatctccgtggacctgctgcccggcgccagcggcaacggcttccggctcaag
cgtcactcggccgccggcgaggtgcaccgcatccgcgtgctgccgctgcgctgtcgcccg
cggcaggcgacggccgacggccacgccgccgccgccggcgccgccacccctccggcgcgc
cacctccccgcacggccctcggccccggcccccggcagcacgcgcccggcatcctgtcgt
cccaaggacggcggcggcggcggcgccggcaagcagtcgcgcttcgtggtgcagctgcat
aagccgccggccgccgagccttgcgcgtccggcgacggcggcgacttcctggcgggcaag
ccggccgcgtacccgcgtgcccgcctgcgccgcagcacctccgcctgcctcctgccggcg
caggaggacgcgggggagcgtgggcaccggctcctcggcgcggaggcggagggcgagcgc
gccgccgacgtcgggcgcggccgcgccgattacccccagctgctgcggagccgctcgttc
gacgggatctcgccgagccctccgccgtcgccggtcttccacgtggagcaggagatgatc
gggggctcgccacacctgcggattaccgtgacgcgtggcggggacgcgaggggccgcgcg
ccgggctcctccgtcgtgcgggactgcggcggcgttactccggaagggaccatcgttata
tcgtcgcggaaccactgtaagacgcgagatgatttcctgggacaagtggacacctccctc
agccaattgccgacagaagacccgtccagggagcgaccctacaccttcagggacttcatt
ctgcggccgagaagtcacaaatcccgggtgaagggcttcctgcggctcaagatggcgtac
ttgccgcagaacgggatgaacgaagaaccgtccacccagaccgaggattcagaccccggc
tgggaggtggtggattcgatggagggcggcgtgagccagcggccgagtcagcagcagcag
cagccagccctgccgcccgactgggaggagaggcaggacaacctgggccgcacctactac
gtgaaccacaagaaccgcagcacccagtggcaccggcccaccgtcttggaccccgtggag
gacgtgcaggcgacggaggagcgcagcgaccagcaggcgcagaccgtgttctgctcgcgg
agacagatcaccgaggactcggactctggcgacgtgcgcgactccgccgacctgacgtgg
gagatcatcgagcccgagtcggaccgctccccgcgctccccgctgcctccgccgccgtct
cccaccaccaccaccaccaccgacggcgctcgtctggtctcgtccgacgaggccggcttg
aggccgcagtcccccgccgagcggacgacgcccgccacggtgctggcttccaggagggcg
cgatcagcgagcgtcaccctctctgagccgcagcagaacaacacgctgttggttccccag
ctcttcaccacgccgggcatgccccccgggtgggaggaacgcaaggacgacaagggccgc
acgtactttgtcaaccacaacaaccgcaccaccacgtggacacgccccgtcatgcagctg
gtggacgacggggtgccggtggccggggcggtggcgccggccaacggggaggcggaggtg
caggtgcaagtgcggcgcccgcgcagcctcagctctccctcgagcccccgagagttgctg
cccctgcacagccttcagaacctgagggaggcgacgcagcccaagcggaacagagttccc
ttcccgtcgccgcagtcgccccaattctcgccggacgactcgccgctcggctcgcccaag
cagcagcacaagccgagctccggcacggcgttcatgccgcccggctgggagatgcgcttc
gcccccaacggacgccccttcttcatcgaccacaacgcgcggacgaccacgtgggacgac
ccgcggttaaaggttcctgtgcacatgcggacccggcctagtctggacccctctgagctg
gggcccctgcctcccggctgggaggagcgggtgcacacggacgggaggaccttctacatc
gaccacaacaccaagaacacgcagtgggaggacccaagactgcagagcccggcgatcacg
ggcccagccgtgccatattcacgggactacaaacagaagtacgacttcttccggaagaaa
ctaaaaaagccgacggacgtgccgaaccgcttcgagatgaagctgcgccgcggcagcatc
ctggaggagtcgtaccgacgcatcatggcggtgaagcgcacggagttgctcaaggcgcgc
ctctggatcgagttcgagacggagaaggggctcgactacggcggcgtcgcacgcgagtgg
ttcttcctcatctccaaggagatgttcaacccctactacgggctcttcgagtactcggcc
acggacaactacacgctgcagatcaaccccaactctggcctctgcaacgaggagcacctc
tcctacttcaagttcatcgggcgagtcgccggcatggcggtctaccacggcaagctcctg
gacgggttcttcatccgcccctactacaagatgatgctgcagaagcccatcacgctgacc
gacatggagtctgtggacagcgagtacttcaactcgctcatgtggatcctcgagaacgat
cccacggacctcgacctgcgcttctgcatcgacgaggagctcttcgggcagacccatcaa
gtcgagttgctgccaaacggatccgagatcgtggtcaccaacgacaacaagaaagagtac
atcgacctggtgatccagtggaggttcgtcagcagagtccagaagcaaatgaacgctttc
atggagggcttctgcgagctgatacccatggacctgatcaagatatttgacgaaaatgag
ctggagctgctcgtgtgcggcctgggagacgtggacgtgaacaactggaggcagcacacg
gtctacaagaacggctactgcgccaaccaccccgtcgtccagtggttctggaaggcggtg
ctgctgatggacgccgagaagaggatccgtctcctgcagtttgtgacggggacatcgcgc
gtccccatgaatggcttcgccgagctgtacggttccaacggccctcagctgttcacagtt
gagatgtggggtgcaccggagaaactcccacgagcacacacctgcttcaaccgcctggac
cttccaccgtacgagtcgttcgaggagctgcgggagaggctgaacatggccatcgagaat
gcgcagggcttcgagggcgtagactga
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integrated database retrieval system
