Lethenteron reissneri (Far Eastern brook lamprey): 133354300
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Entry
133354300 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: neogenin-like
KO
K06766
neogenin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04350
TGF-beta signaling pathway
lrj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133354300
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133354300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133354300
Cell adhesion molecules [BR:
lrj04515
]
Immunoglobulin superfamily
DCC/UNC5 family
133354300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
ig
Ig_2
Pur_ac_phosph_N
V-set
Ig_DSCAM-DSCAML_C
Interfer-bind
C2-set_2
Tissue_fac
DUF4998
Motif
Other DBs
NCBI-GeneID:
133354300
NCBI-ProteinID:
XP_061427038
LinkDB
All DBs
Position
46:complement(11118746..11216810)
Genome browser
AA seq
1549 aa
AA seq
DB search
METGAGGTPVGGPARRTRRSGGPGDTSGPVAILAAAVVVVTLAAFGFTPGSAAPGFATAL
RFVTEPSDTVAVRASSARLNCSARPERASGAAGEDDVGPAVRVEWKRDGVILALPLQAEG
EQQQQQQEERRVVLASGALLLRSVQHGRGSRSDEGRYECVATAPGIGTIVSRAARLSIAG
AVRVAAGPGHVSVHAGDGAVLPCEVSGEPRPSVRWIKDVGEPGGEPGAARRVVTLPDGAL
QISRAEPSDAGTYRCVAENAAFSRTGDDIRLTVVPEPGVARRAAFLRVPKDVEALLGQAA
MLECSASGFPRPTVRWEKGGKAVHESEHVKVVGGGHLLVEVVTPGDAGLYSCTVGEGADT
MQASAVLTVHAPPRFSFPPRDALAHEGADVELACGVEGNPAPSIKWLKNGDTVIPGDYFH
IAEEHTLKILGVVKSDEGMYQCVAENEHGNVQAGAQLLVADRAGARTGGGSGGASPAPSA
PRDLVAAVVSTRFVRLVWRAPAEPRGDVTAYAVFHSRDGASRERVVNTSKTGDLQITISD
LRPETTYTFRVVAYNRHGLGESSAPLKISTQPEVQVPGPPVGLQATALSPTSVSVFWQPP
LSGNGPILNYRLLHVERGKGPTGEQEVDVEGLSFVAHGLKRFTEYSFRVVAFNRHGPGLS
SEDVTARTLSDVPSAPPQNVTVEVLNSKAILVRWQPPPPSAHNGVIVGYRIRHRKTGRRS
EAEVTESSQLWHQLAGLERGTEYSFKVSALTVNGTGPSSDWVSSETFEEDLDESRVPEQP
SSLHVRPLTTNIVVSWTPPAGSDVMVRGYFIGYGVGSPYADTVRVDAKQRYFTIEGLEPN
HQYVISLRAFNNMGQGVPLYESATTRSITDSMDPSEPDPFDLFSDAFTAVPEPPTPMLPP
VGVQALVLGPDTIRITWADNSLPKNQRIPDARYYTARWKTYFTNNAKYKMANSTTLSYLV
TGLKASTLYEFSVMVTRGRRSSTWSMTAQSTTLEAVPTSAPKDLTIISKEGKPRIVIVNW
QPPSEANGKITGYIIYYTTDKSAELHDWVIEPVVGDRLSHQVQELTLDTLYFFKIQARNS
KGMGPMSEPVTFRTPRAPASGRGAPGSGIAWAGSPSLLNRATSNDGPTGQQHPLQSSRGS
ALDNNLLIIVIVTVGGLTVICAIVVAVVCTRRSAAAVKSKRAAPKSPNGSGKRKGSPKDL
KPPDLWIHHETVALKPLDKAQGPGVGGGPGGGGGPGPSGPSGPADPHSAALQCGGGGGPD
VERGDAYTNHQRGSYSGKRGEDGISSSLERSIAARQAMRLKLAVPSEHKHAAPHHHHHQQ
QQHHHHHHTHLSHSAALLPSPAPPPVPSPPASPLRHHYPPCQPPHYGAHYPGSPPGDPQE
RGSHLVEIVGVDVEELRSGGLPPLPPAGEGSSSGEYEEPRPVVPTAHVRPTQPLRSFAVP
LVSAHGALRPSDSPLLSHHAGGHSPLLSHHTGSGSPKVATLGTLGRLRVPLPVILPSAPD
SSAHDSQTFEDSDSTYGHDDDDDEDDLSAEMANLEGLMKDLNAITSAGI
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggcgcagggggcacccccgtggggggccccgcgaggaggacgaggaggagt
ggggggccaggggatacctcgggccccgtcgccatcctcgccgccgccgtcgtcgtcgtc
accctcgcggcgttcgggttcacgcccggctcggcggcgccgggattcgccaccgcgctg
cgcttcgtcacggagccctcggacacggtggcggtgcgcgcctcttcggctcggctcaac
tgctcggcgcggccggagcgagcgtcgggcgccgccggcgaggacgacgtggggcccgcc
gtgcgcgtagagtggaagcgcgacggggtcatcctggcgttgccgctgcaggccgagggt
gagcagcagcagcagcagcaggaggagcgcagggtggtgctggcgagcggcgcactgctg
ctgcgctctgtgcagcacgggaggggcagccgctcggacgaaggccgctacgagtgcgtt
gccacggctcctggcatcggcaccatcgtgagccgcgctgctcggctctccatcgccgga
gcggtgcgagtggcggccggcccgggccacgtgtcggtgcacgccggtgacggcgcggtg
ctgccgtgcgaggtgagcggggagccgcggccgtcggtgcggtggatcaaggacgtcggg
gagccgggcggggagccgggcgcggcgcgccgagttgtaacgctgccagacggggccctg
cagatctcccgcgccgagccctccgacgccggcacctaccgatgcgtggcggagaacgcg
gcgttttcccggacgggcgacgacatccgactcacggtggtgcctgagccgggggtcgct
cggcgggccgccttcctgcgcgtgcccaaggacgtggaggcgctgctgggccaggccgcc
atgctggagtgctcggccagtgggtttccccggcccactgtccggtgggagaagggaggc
aaggccgtgcacgagagcgagcacgtgaaggtggtgggcgggggccacctgctcgtggag
gtcgtgaccccgggggacgcggggctctactcctgcaccgtcggggagggcgccgacacc
atgcaggccagcgccgtgctcaccgtacacgctcccccgcggttctcgttccccccgcgg
gacgcgctggcgcacgagggcgcggatgtggagctggcgtgcggcgtggaggggaacccc
gcgccctcaatcaagtggcttaaaaacggcgacaccgtcattcccggcgactacttccac
atcgcggaggagcacacgctcaagattctcggcgtcgtcaagtcggacgaagggatgtac
cagtgcgtcgcggagaacgagcacgggaacgtgcaggcgggtgcgcagctcctcgtcgca
gacagagctggagctcggaccggtggcggttccggaggggcgtccccggcgccgtcggcc
ccgcgcgacctcgtggcggccgtggtgtcgacgcgcttcgtgcgcctcgtgtggcgcgcg
ccggccgagccgcgtggcgacgtcacggcctacgccgtcttccactcgcgcgacggcgcc
agcagggagcgcgtcgtgaataccagcaaaacgggcgacctccagatcaccatttctgac
ctccgacccgagaccacgtacaccttccgggtggtggcctacaacaggcatgggctgggc
gagagctccgcgccgctcaaaatctctacccagccggaagtgcaagtgccgggccccccc
gtgggcctgcaggcgacggcgctgtcccccacgtcggtgtccgtgttctggcagccgccg
ctctcgggcaacgggcccatcctcaactaccgcctcctccacgtggagcgtggcaagggc
cccaccggcgagcaggaggtggacgtggagggcctctcgttcgtcgcccacggcctcaag
aggttcaccgagtacagcttccgcgtcgtggccttcaaccggcacggcccgggcctctcg
tccgaggacgtgacggcgcgcacgctgtcggatgtgccgagcgcacccccccagaacgtg
acggtggaagtgctcaactccaaggccatcctggtgcggtggcagcccccgccccccagc
gcgcacaacggcgtcatcgtcggataccgcatccggcaccgcaagaccgggcggcgcagc
gaggcagaggtcacggagagcagccagctgtggcaccagctcgctggcctggagcgcggc
accgagtacagcttcaaggtgtcggcgcttacggtgaacgggacggggccctcctccgac
tgggtctccagcgagaccttcgaggaggacttggacgagtcgcgcgtgcccgagcagccg
agctcgctgcacgtgcgccccctcacgacgaacatcgtggtgagctggaccccgccggcc
ggcagcgacgtcatggtgcgcggctacttcatcggctacggcgtgggcagcccctacgcc
gacacggtgcgcgtggatgccaagcagcgctacttcaccatcgagggactcgagcccaac
caccagtacgtgatctccctgagggccttcaacaacatgggccagggagttcctctctac
gagagcgccaccactcgctccatcacggactcgatggacccctcggagcccgacccgttt
gaccttttctcggacgctttcacggcagtccccgagccgcccacgcccatgctgcccccc
gtgggcgtccaagcgctggtgctggggcccgacacgatccgcatcacctgggccgacaac
tccctccccaagaaccagcgcatcccggacgcgcgctactacaccgcgcgctggaagacg
tacttcaccaacaacgccaagtacaagatggcaaactcgacgacgctgagctacctggtg
acggggctgaaggcgagcaccctctacgagttctccgtgatggtgacgcgcggacgcaga
tccagcacctggagcatgactgcgcagagcaccaccctggaggccgtgcccacgtccgca
ccgaaggatctcaccatcatcagcaaggaagggaagccgcgcatcgtcatcgtgaactgg
cagcctccgtctgaagccaatggcaaaatcacaggctacatcatctactacacgactgac
aagtccgcggagctgcacgactgggtgatcgagcccgtggtgggcgaccgcctctcgcac
caggtgcaggagctcacgctcgacacgctctacttcttcaagatccaggcgcgcaactcc
aagggcatgggccccatgagcgagccggtcaccttccgcacgccgcgagcaccagcttct
ggcaggggcgctccaggcagtggcatcgcttgggctgggagccccagtctcctaaaccgt
gccacttctaatgacggccccacggggcagcagcaccccctgcagagcagccgcggctcg
gcgctggacaacaacctcctcatcatcgtgatcgtgacggtgggcggcctcaccgtcatc
tgcgccatcgtcgtggccgtggtgtgcacgcgccgctcggccgccgccgtcaagagcaag
cgagccgcgccaaagtctccaaacggttcgggcaagcgcaagggcagccccaaggacctg
aagcctccggacctgtggatccaccacgagaccgtggccctcaagccgctcgacaaggcc
cagggcccgggcgtcggcgggggccctggcggcggcggtgggccgggcccctccggcccg
tccggcccggccgacccgcactcggcggctctgcagtgcggcggcggcggcgggccggac
gtggagcgcggcgacgcctacaccaaccaccagaggggctcctactcaggcaagcgaggc
gaggacggcatctcgtcgtctctggagcgctcgatagcggcgcgccaagccatgcgcctc
aaactggccgtgccctccgagcacaaacacgcggcgccgcaccaccaccaccaccagcag
cagcagcaccaccaccaccaccacacgcacctcagccactcggccgcgctgctgccgagc
ccggcccctccccccgtgccgtcccccccggcgtcccccttgcgccaccactaccccccc
tgccagccgccgcactacggcgctcactacccgggctccccccccggggacccgcaggag
cgagggagccacctcgtcgagatcgtgggagtggacgtggaggagctgcggagcgggggg
ctgccccccctcccgccggccggggagggctcgtcgagcggagagtacgaggagcctcgg
cccgttgtgcccacggcgcacgtgcggcccacgcagcccctgcgcagcttcgcggtgccc
ctcgtgtcggcccacggggcgctgcgcccctccgacagccccctcctgtcccaccacgca
ggtggacacagccctctcctgtcccaccacacagggagcggctcgccaaaggtggcgacg
cttggaaccctgggacggctgcgcgtgccgctgcccgtgatcctgcccagcgccccggac
tcgtcggcccacgactcgcagaccttcgaggactcggacagcacctacgggcacgacgac
gacgacgacgaagacgacctcagcgctgagatggcgaaccttgagggcctcatgaaagac
ctcaacgccataacctccgcgggaatctga
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