Lethenteron reissneri (Far Eastern brook lamprey): 133354343
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Entry
133354343 CDS
T09663
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133354343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
133354343
Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
133354343
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
133354343
NCBI-ProteinID:
XP_061427092
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Position
47:6119534..6206738
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AA seq
772 aa
AA seq
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MLGGGASVALAQYNTPVLLYSRDAIANAVAGQARAMGSEIAGGPPKEVVVDTSTPVFQAV
ARREATARGDGPSTADEDWANKNSTAQSRSFKILAQITGTHDEEAGELEPVEMTSHSRSS
RAKKHRSRKSRANYASSSDADDRKPPRNSRKGDVPVNGPRAPDSGNAASAKRSRVANKGH
SVRFEENSKGSVVDAASTGAQKQQQQQQQQQQQQQKAPKEKPNGPVTKPVAYPRRANSSV
SASPIRHVEPSRRRSSAGSSLSAWGGAAPPSYSFFLSLGAKPSVAYPFSPAASPPSRSST
PAPPSPPAAVLPPPPPPLLLPGDGASLAPRSLVGAAPQCSPSSFSAATQPRSLASSNSPV
SWTAQSSTVRTNSSVSSRAVTGSQLASARATIRAALSGQSGLPNGPPSPPRPQSALEALH
LSPSFGPPRVLPRPTARSPRFGAHTAGPSRDEPVPVATATMSVKTSTRKPPGTTTGPPKP
TAEPMGPPPPSVKAHTAPPQVVKTAGLSWTPNGASGRPPPSSAAAGPAATGFGIQAKTKG
PTGGAQEGVAAAKVGSAGGGGAAGGGGMQAGWGAPGSGLLVQRAEHVPEALRAPFCNKCN
NIIRGPFIVALGRSWHKDHFNCCHCNSCLADTGFVVEAGKVYCQGCYGMFFAPPCGKCSQ
KIVGEITYALKQAWHSNCFVCACCSQPIGQGVFHMEDGDPYCEKDFFRLFSTKCEGCDFP
VEAGDRYVEALGHTWHDTCFVCTVCQVNLEGQPFYSKKNKPLCKKHANSINI
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgggggcgccagcgtcgccctggcgcagtacaacacgcccgtcctgctgtac
tcgcgggacgccattgccaacgctgtcgccgggcaggcccgggccatgggctccgagatc
gccggcggcccgcccaaggaggtggtggtggacacgagcacgccggtgttccaggcggtg
gcgcgccgggaggcgacggcgcgtggcgacggccccagcactgccgacgaggactgggcc
aacaagaacagcacggcgcagtcgcgctccttcaagatcctcgcgcagatcaccggcacg
cacgacgaggaggctggtgaactggagcccgtggaaatgaccagccacagccgctcctcc
cgcgcaaagaagcacaggtcgcgcaaatcccgggccaactacgccagcagcagcgacgcg
gacgatcggaaaccgccgcggaactcgaggaagggcgacgttcccgtcaacgggccccgg
gcccccgacagcggcaacgccgccagcgccaagcggtcgcgcgtcgccaacaaggggcac
tcggtgcgcttcgaggagaacagcaagggatccgtcgtggacgcggcaagcaccggagcg
cagaaacagcagcagcagcaacagcagcagcaacagcagcagcagaaggcgccgaaagag
aagcccaatgggcctgtgacgaagcctgtggcctaccctcgtcgcgcgaactcgtccgtg
tccgcgtccccgatccggcacgtggagccgtcgcgccgccgctcgtcggcaggctcctcg
ctgtcggcctgggggggggctgcccccccctcctactccttcttcttgtcgttgggcgcc
aagccgtcggtcgcgtaccccttctctcccgcggcctcgcccccgtcacgttcctccaca
cctgctcctccttctcctcctgctgctgttctacctccacctcctcctcctcttctactt
cctggtgatggagcatctctggctcccaggagccttgtgggcgctgccccgcaatgctcc
ccttcctccttctccgcagccacgcaacctcgctccctcgcttcctccaactcccccgtg
agctggacggcacagagctccaccgtaaggacaaactcgtcggtttcatctcgagccgtg
actggctcgcagctggctagcgcacgtgctacgatccgggctgccctgtccggccagagc
gggcttcccaatgggcctccttcgccaccacggccccagtcggcgctcgaagcgcttcat
ctctcgccgtcgtttgggcctccgcgagttctgcccagacccaccgctcggtcgccacgt
ttcggtgcccacaccgctgggcccagcagggacgagcctgttcccgtcgccacggcgacc
atgtcggtgaagacgtcgactcggaagccccccgggactacgacggggccccccaaaccg
acggccgagcccatgggccccccaccgccctccgtcaaggcgcacaccgctccgccgcag
gtcgttaaaaccgcagggctgtcgtggacgcccaacggggcctcgggccgcccccccccc
tcctccgcagcggccggcccagccgccacgggcttcggcatccaggccaagaccaagggc
cccacgggaggcgctcaggagggcgtcgctgcggccaaggtgggctcggcgggcggcggt
ggggccgccggcggcggcggcatgcaggccgggtggggggcgcccggcagcggcctcctc
gtgcagagggccgagcacgtgcccgaggccctgcgcgcgcccttctgcaacaagtgcaac
aacatcatccgaggcccgtttatagttgcgctgggccgatcgtggcacaaggatcacttt
aactgctgccattgcaactcgtgcctggccgacacgggcttcgtggtggaggcgggcaag
gtgtactgccagggctgctacggaatgttctttgcacccccgtgtggcaagtgcagccag
aagatcgtcggggagatcacgtacgcactcaagcaggcctggcactccaactgcttcgtg
tgcgcgtgctgcagccagcccattggccaaggcgtcttccacatggaggatggagatccc
tactgcgagaaggacttcttcaggctgttcagcaccaagtgcgagggctgcgacttcccc
gtggaggccggcgaccgctacgtggaggccctgggccacacgtggcacgacacgtgcttc
gtgtgcaccgtgtgccaggtgaacctggaagggcaacccttttactccaagaagaacaag
cccctctgcaagaagcacgccaactccatcaacatctga
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