Lethenteron reissneri (Far Eastern brook lamprey): 133354434
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Entry
133354434 CDS
T09663
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrj03009
]
133354434 (RRP12)
Ribosome biogenesis [BR:
lrj03009
]
Eukaryotic type
90S particles
Other 90S particles
133354434 (RRP12)
Pre-60S particles
Other pre-60S particles
133354434 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
DUF6031
MMS19_C
Motif
Other DBs
NCBI-GeneID:
133354434
NCBI-ProteinID:
XP_061427239
LinkDB
All DBs
Position
47:complement(7402879..7442377)
Genome browser
AA seq
1325 aa
AA seq
DB search
MARHGKLKAGVSSKLPRWKKGQSSSSNPATSRHRDAARSRFYGRSKGKSDLTVASLRLHD
DIQSDPTASAGPASERTPTVGPAQDAASERTAGTFLSGLSDITNATFGRVQRYWQSSSAA
HKEICAVLAAVTEVIRAKGGTETETEYFAAFMTALETIESDESLAAVAYLLNMVIKRVPS
SVLKKKFSDISKVFVDLMSTHTNSATSTVLRWILSCTAVLLRKQDLAVWADASTMNTFHA
LLSFATHTKPKVRRAGQQAVSAVIRGSEFMFADEAPPHHPAASSTAKFCVREIEENGGTG
DATGTLHVLGLLKEVVPCLPTQSLKACCESVLRMLALGHVLVTARGMQALHALFAAHPKQ
HTLPAELNAQLITALYDYLPSMNDVQPMLAWLAVMESAHVNLARLNGNLCLSHLPRLVNS
SMNCMLSDRSEVAVAAAQAIKTVLEKCVAPQVEDLGVLLKGAAPGQNTPVLKMFRAVEDG
LKYRYHGAWKLVLQLLQTFFRVLGKQCHPIMSKCLVTLGELRASGHFAHVSELEEAIGAA
VESMGPCVLLQALPLGITGTEETPDLSHSWLLPVMRDHIRNTEIHFFTSYFLPLAATFKS
RASELRSAGKNLQAKLFDTLQWQVWSLLPGFFTNPVDLVPAFRGVARVLGTALTERPDLR
MLVCQALRTLIGKGCSSDDERAEVGRFSKNFLPIFFNIYTEGESSQGAPDGARLAVLETV
KSFLCITDEQLICSFFEKASDKFQNPQTEHAVSDLSGLPLFPRCSGCLVMDLVVVMTPFV
DEAHLANIYATVLPHLQSRDVGMQKKAYRVVQEACAGERPACQNFVLGHLASLQEALLTS
LRATASPAKRPRLKCLALVVKQLSADREDFLTAIIPEVILCTKEVAVSARTSSLNLLAEI
GHAFLRFQPDDKPEALRRYLALVYAGLAGSVTMISCTVLALTRILFEFKDHLEGSVLSQL
LSNVVLLLSSHTRDVVKSALGFLKVVIFVTDVRTLAQHVQLIVEGIVNWRDDSRRHFRAK
VKNIFTKLVRKFGYEMIDSMVPETYHKVLVNIRKAEERARKSRALGHAGGDDDDDHDDGD
ADDAKSRRSSIRDNVDQLLADSDSEPEGGKGEESAGRGGKKAPKAAKAWLQEGEGDEPLD
FLDPSVAQRVLATKPEQNQRSHVKHDFKFSSDGRLIIRDEEEEEEKMKKKKRGQVDEDEE
LADMMAEVGMRKNSSNRKRKLASKDDDGDDGADEPRYKAGGSGIHRAVRGKKEAPGFGAT
YKSKRAAGDVKRKGKPDPYAYVPLDKGQLNRRKRAKMQGQFKGLVKGAKKGSCQGQEAEY
EKQET
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacacggcaagcttaaggccggcgtgagcagcaaacttcctcgctggaagaag
ggccagagcagcagtagcaaccccgccacgagccgacaccgcgatgccgcccgcagtcgc
ttttacggtcgcagcaaaggcaagagcgacctcaccgtggcttcgctgcgcttgcacgat
gacattcagagcgaccccacggcgtctgctgggccggcgagcgagcggacgccgacagtg
ggaccggcccaggatgccgccagcgagcggacggccggcaccttcctgagtgggctctcc
gacatcaccaacgccacgtttggccgcgtgcaacgctactggcagtccagctcggcagcg
cacaaggagatttgtgctgtgttggctgccgttacggaagtgattcgcgcaaagggaggc
accgagaccgagacagagtattttgcggcatttatgacagctctggagacgatcgagagc
gacgaatccttggcagctgtcgcttatctcctcaacatggtcattaagagagtcccttcc
tcggtgctgaagaagaagttctccgacatctccaaggtgtttgtcgacctcatgtcgact
cacaccaactcggcaaccagcactgtgctccgctggattttatcatgcacggccgtgctg
cttaggaagcaggacctcgccgtctgggccgatgcctccactatgaacacgttccacgcc
ctactcagcttcgcgacgcacaccaagcccaaggtgcggcgggctggccagcaggctgtg
agcgctgtgatcaggggctcggagttcatgttcgcagacgaagctcctcctcaccaccca
gccgcttcaagcaccgccaagttctgcgtgcgcgagatcgaggagaacggcgggacgggc
gacgcgacaggcacgcttcacgtgctaggcctgctgaaggaggtggtgccctgcctgccc
acgcagagcctcaaggcgtgctgcgagagcgtgctgcgcatgcttgccttgggccacgtg
ctggtgactgcacgcggcatgcaggcattgcacgcgctgttcgcagcgcatcccaagcag
cacactcttcccgcggagctcaacgcacagctcatcacggctctgtacgattacctgcca
agcatgaacgacgtgcaacccatgctggcctggctggctgtgatggagagtgcacacgtc
aatctggctcggctgaatggcaacctgtgcctgagccatctcccccgactggtcaacagc
tccatgaactgcatgctgtctgaccggtcagaggtcgctgtggcagctgcccaggctatc
aagacggtgctggagaagtgcgtggctccgcaagtcgaggacctgggcgtgctgctgaag
ggagctgcacctgggcagaacacacctgtgctaaagatgttcagggcggtggaggatggg
ctcaagtaccgctaccacggggcctggaagcttgtgctgcagctgcttcagacgttcttc
cgcgtgctcggcaagcagtgccaccccatcatgagcaagtgcctggtgacgctgggcgag
ctgcgtgccagcggacactttgctcatgtctctgagctggaggaggccatcggggcggcg
gtggagagcatgggtccctgcgtgctgctccaagcgctgccgctgggtatcacgggcacc
gaggagacaccggacttgtcacactcgtggctgctgcccgtaatgcgagaccacatccgc
aacactgagattcacttcttcacttcctacttcttaccgcttgctgccacattcaagagc
agagcctcggaactcaggagcgctggaaagaacttgcaagccaaactgtttgatacactc
cagtggcaggtgtggtcgctgctgccaggcttcttcacgaaccccgtggacctggtgcca
gcgttccgtggcgtggcgcgcgtgctcggcacggcactcaccgagcgtccggacctgcgc
atgctcgtgtgccaggcgctgcgcacgctcatcggcaagggttgctcctccgacgacgag
cgagcagaggttggccgtttctccaagaacttcctgcccatcttcttcaacatctacacg
gagggcgaatcctcgcagggggcgcccgacggcgcgcgtctcgccgtgctcgagacggtc
aaaagcttcctctgcatcaccgatgagcagctcatctgcagcttcttcgagaaggcgagc
gacaagttccaaaatccccagacagagcacgcggtcagcgatttgagtggtctgcctctg
ttcccacggtgctcaggctgcttggtgatggacttggtggtcgtgatgacgccgttcgtg
gacgaggctcacctggcgaacatctacgccaccgtgctgcctcacctgcagagccgagac
gtgggcatgcagaagaaggcgtaccgcgtggtgcaggaggcgtgcgcgggcgagcgtccc
gcgtgccagaactttgtactcggccacctcgcgtctctgcaggaggcgctgctcacctcc
ctgcgcgccaccgcctcccctgccaagcggccccgcttgaagtgcctggccctggtggtg
aaacagctctcggccgatcgggaggacttcctgacggccatcatccccgaggtcatcctg
tgcaccaaggaggtggcggtgagcgcccgtaccagctccctgaacttgcttgccgagata
ggccacgctttcctgcgcttccagcccgacgacaaaccagaggctctgcggcgctacctg
gccctcgtctacgccggtcttgccggctccgtcaccatgatcagctgcaccgtgctcgcc
ctgacgcgtatcctcttcgagttcaaagaccacctggagggcagcgtgctgtctcagctg
ctgtccaacgtggtcctgctgctgtcgtcgcacacgcgtgacgtcgtcaagtctgcactc
gggtttctcaaggtcgtcatctttgtgacggacgtgcgcacgctggcgcagcacgtgcag
ctcatcgtggagggcattgttaattggcgagacgacagcaggagacatttccgcgccaag
gtcaagaacatcttcacaaaactcgtacgcaagttcggctacgagatgatcgacagcatg
gtgccggagacgtaccacaaggtgcttgtcaacatccgcaaggcggaggagcgagcgcgc
aagagccgtgctctggggcacgcgggcggtgacgatgacgacgatcatgacgacggagac
gcggacgacgctaagtccaggcgcagcagcatccgggacaatgtggatcagctgctggct
gacagcgactctgagccggagggtggcaagggggaggagtctgcaggccggggcggcaag
aaggccccgaaagccgcaaaggcctggctgcaggaaggcgagggcgacgagccgcttgac
ttcctcgacccgagcgtggcgcagagagtcctggccaccaaacctgagcaaaaccagcgc
agtcacgtaaagcacgacttcaagttctcttctgatggacgtctcatcatccgagacgag
gaggaagaggaggaaaagatgaagaaaaagaaaaggggtcaagtggatgaggatgaggag
ctcgcggatatgatggcggaggtcggcatgcgaaagaattcgagcaacaggaagaggaag
ctggcgtcgaaggacgatgacggagacgatggcgccgatgagcccagatacaaagctggt
ggaagtggtatccaccgtgccgtgcgcgggaagaaagaagctcccggatttggagccacg
tataaatccaagagagcagccggagatgtgaagaggaagggaaaaccggatccctatgcc
tacgtcccgctcgacaagggacagctgaaccgaagaaaaagagcgaagatgcagggccag
ttcaagggcctggtgaagggtgcgaagaagggaagctgccaagggcaagaggcagaatac
gagaaacaagaaacataa
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