Lethenteron reissneri (Far Eastern brook lamprey): 133354458
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Entry
133354458 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2-like
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133354458
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133354458
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
PDZ_6
RA
cNMP_binding
RA_2
PDZ_2
Imm35
DUF6180
Motif
Other DBs
NCBI-GeneID:
133354458
NCBI-ProteinID:
XP_061427292
LinkDB
All DBs
Position
47:complement(8848353..9069578)
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AA seq
1758 aa
AA seq
DB search
MAHRADVGLLSALVKPVPCRTPQDLELVYYFLHGLESLSHLREHQLRLLSRTAHYQKVDV
GCLVFSAYDVSTSWYVLVVGSVFIHGAMFFPRSSFGRQRPGSQRGHDCIVLEPSELIVLD
FMDEHEEFQRQASFRQSRRRFKRITHDGARQTVTDCPGEPPEAKPPVPLPSVHYVPHAPA
QRLYSTLPADLQKMQLSESLHHQHMARVSASQSGCSIGSDSGSSLSDIYQATESDPGDMD
LTGLPEGLVDSEDDEEEDEDEIERSGEALPSHDFVRDCLEKEPNDRTDDDIEQMLEFMHQ
LPAFANMTMSVRRELCAVMEFAVVEHAGTVVLNHGEELDSWSVILNGSVEITNFDGRTET
LYMGNSFGVSPTEHTEVMVGVMKTKTDDCQFVCIAQQDYCRILNQVERNMQKVEEEGEIV
MVKEHRELDRTGTRKGHIVIKGTMERLLTHLVEEHSVVDPTYVEDFLLTYRTFLPGAKHV
GEKLLEWFGDTSLRDKVTRVVLLWVNNHFNDFEGDPEMTQFLEKFKDGLEREKMQGHLRL
LNIACAAKAKRRSLTLTRPGRDEPLPFALTGGSERGFGVFVESVQAGSRADEAGLGRGDQ
ILEVNGQNFENIQLSKALEILQHNTHLSISVKTNLMVFKELQNWTGDEPGSLNFAGRCGA
ATAAPSSSSSGAAAAAAALSYESHRPRIVDGGNAVRLSVPDLAIPHELSIPVEKFKGKGK
ASTVSGRSRLRKFVNKTFSILPTKPYGSGSTEVKIGQSQDDSIVGLKPPVCGTSTWMLRG
SLSSSNPDLLQCHRLMDFTAPPDVHDQVLRIFKADQSSRYIVIGRETTAREVVTLALQEF
TLTGPPDSFSLCEVSAAPDGVTRQRRLPDQLSRLAERIQLSARYYLKNNMETETLCSDEN
AQELLREGQVSLLQLSTVEVAAQVSMGDFELFRTIEPTEYVDDLFKLRSRTGTRALKLFE
GALNQETFWVASEVLAEPGQIKRVKVLKHFIKIALHCRECKNFNSMFAIISGLSHSSVAR
LNGTWEKLPTKYESLYRELQDLFDPSRNMAKYRNVLSSQSLQPPLIPLFPVVKKDLTFLH
EGNDSRVDGMVNFEKLRMIAKEVRQVVRMASVGMDAAAMFRHRRKRWRSLGSISQGSSNS
AVFDAIQASGHRKRARRSSLVNPRKLYEEAQMGRRVKQYLAQVNRDVDEDSLMTRSVALE
PASAPPAAPRIPGERKTAKSAESSPVVTRAPILRQGASRWPHGTPGSTAVGAATQAAPMS
LQPPRKRFPANALLPLGATSPNSYRKLLALSESHADKKSRSGDESVPTPPASPRTSPRRG
SQMKRKNSQRSNSGGSTASSAVENANKNNNTPRTYGIGFTLASLTDVRATCESGSDEREA
VEGPASGGQHETSPHGPGDEVGTERPPPGLPPTSDDPGAQDSDPGSKADAAAAAVDDDAE
GGGRSLLLPPYSRNSLETSDSGRDSWTSCSSGSHDNFQALTSSRSYWSGSGGLSTGDLAA
ELEQCWVLLGAGRLATNASKRAAAVGDGPVVVDDDGGVVVRGAVRSSPSVLSSLSPSRES
WASSTGSLSPEENEGDTGTIKRRNGKDCLPDAAGRRDEKPAPPVGGAALVADAARAGGDG
REDSAEKTRDAEVVVAAAEPAGEGGLVVYCVTRKTVPSSAGSGAGDPLHALAPPEESSAH
SGSCPAHLHPPLHATACDSGPEVQQQQRPCSATPAIRPTWNVPHVLGSQAVHGQGLLSSP
VKQQQQQYEDEKDQVSTV
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccgtgccgacgtgggattgctgagtgcactcgtcaagcccgtcccatgcagg
acaccccaggatttggagctggtttattattttctacacggcttggagtccctgtcccac
ctccgtgagcatcaacttcgattattgagccgaactgcacactaccagaaggtggatgtc
ggttgccttgtgttctcggcatacgacgtcagcacaagttggtacgtgctggtggtcggc
tcagtcttcattcacggggccatgtttttcccgagaagcagttttggacgacagaggccg
ggcagtcagaggggccatgattgcatcgttctggagccatcagagctaattgtgctggat
ttcatggatgagcatgaggagtttcagcgccaggcctccttccggcagtctcgccggcgc
ttcaagaggatcacgcacgacggcgccaggcagacggtgacggactgccccggcgagccg
cccgaggccaagccaccggtgcccctgccgagcgtccactacgtcccgcacgcccccgca
cagaggctgtactccacgcttcccgccgacctgcagaagatgcagctgagcgagagcttg
caccaccagcacatggcgcgcgtgtcggcgagccagtccgggtgcagcatcggcagtgac
tctggcagcagcctctccgatatctaccaggccacggagagcgaccctggcgacatggac
ctcacggggctgcccgagggtctggtggactcggaggacgacgaggaggaagacgaggat
gagatcgaacgctccggcgaggctctgccgagccacgactttgtgcgcgactgcctcgag
aaggagcccaacgaccgcacggacgatgatatcgagcagatgctggagttcatgcaccag
ctgcccgccttcgccaacatgaccatgtcggtgcgacgcgagctctgcgctgtcatggag
tttgcggtggtggagcacgccggcaccgtcgtgttgaaccacggcgaggagctggactcg
tggtcggtgatcctgaacggctcggtggagatcaccaactttgacgggcgtacggagacg
ctgtacatgggcaacagctttggagtgtctcctactgagcatacagaagtcatggtcggg
gtcatgaaaacaaagaccgatgactgccagtttgtgtgcatagcacagcaggactactgc
cgcatcctgaaccaggtggagaggaacatgcagaaggtggaggaggagggagagatcgtc
atggtgaaggagcaccgagagctcgaccgcactggcactcgcaaggggcacatcgtcatc
aagggtacgatggagcggctgctcacccacttggtggaggagcactctgtggtcgacccc
acgtacgtggaggacttcctcctcacctatcgcaccttcctgcccggcgccaagcacgtg
ggcgaaaagctgctcgagtggttcggcgacacgagcctccgggacaaggtgaccagagtg
gttctcctgtgggtgaacaatcacttcaacgacttcgaaggggacccggagatgactcag
ttcctggagaagttcaaggatggcctggagagagagaagatgcagggccacctgcgcctg
ttgaacatcgcctgcgccgccaaggccaagagacgctcgctgacgctgacccggcccggc
cgcgacgagcctctgcccttcgcgctgacgggcggcagcgagcgggggttcggcgtgttc
gtggagagcgtgcaggccggcagccgggctgacgaggccgggcttggacgcggggaccag
atcctggaagtgaacgggcagaactttgagaacatccagctgtcgaaggcgctggaaatc
ctgcagcacaacacccacctgtccatctccgtcaaaaccaacctcatggtgttcaaggag
ctacagaactggacgggcgacgagcccggctccttgaatttcgccggccgttgcggcgct
gccaccgccgccccctcctcctcctcctcgggcgccgcagccgctgcagccgcgctgtcg
tacgagtctcaccggcccaggatcgtggacggcggtaacgcggtgcgtctctcggtgccc
gatctggccataccgcacgagctcagcatccccgtcgagaagttcaagggcaagggcaag
gcgagcacggtgagcggccgatcgcggctgaggaagttcgtcaacaagaccttcagcatc
ctgcccaccaagccgtacggcagcggcagcaccgaggtgaagatcggccagtcgcaggac
gacagcattgtgggcctcaagccgcccgtgtgcggcacgtccacgtggatgctgcgcggc
tccctctcctccagcaaccccgacctcctgcagtgccaccggctcatggacttcaccgcg
cctcccgacgtccacgaccaggtgctgcgcattttcaaggcggaccagtcgagccgctac
atcgtgatcgggcgcgagacaaccgcgcgcgaggtcgtcacgctggcgctgcaggagttc
acgctgacggggcctcccgactccttctctctgtgcgaggtgtcggccgcgcccgacgga
gtcacgcgccagcgccggctgcccgaccagctctcccggctagccgagcgcatccagctg
agcgccaggtactacctgaagaacaacatggagacggagacgctgtgctcggacgagaac
gcgcaggagctgctgcgcgagggccaagtgtccctgctgcagctgagcacggtggaggtg
gcggcgcaggtgtcgatgggcgacttcgagctgttccgcaccatcgagcccaccgagtac
gtggacgacctcttcaagctgcgctcgcgcacgggcacgcgcgccctcaagctcttcgag
ggcgccctcaaccaggagacgttctgggtggcgtccgaggtgctcgccgagccgggccag
atcaagcgcgtcaaggtgctcaagcacttcatcaagatcgcgctgcactgccgcgagtgc
aagaacttcaactccatgttcgccatcatcagtggcctcagccacagctcggtggcccga
ctcaacgggacgtgggagaagcttccgaccaagtacgagagcctctaccgcgagctgcag
gacctgttcgacccgtcgcgaaacatggccaagtaccgcaacgtgctgagcagccagagt
ctgcagccacccctcatcccgctcttccccgttgtcaagaaggacctcaccttcctgcac
gaaggcaacgactcgcgggtggacgggatggtgaactttgagaagctgcgaatgatcgcc
aaggaggtccgccaggtggtgagaatggcctccgttggaatggacgctgcggccatgttc
cgacacaggcgtaaaaggtggcgcagccttgggtccataagccaagggagctccaactcg
gccgtgttcgacgccatccaggcgtcgggccaccgcaagcgcgcacgccgcagctcgctc
gtcaacccgcgcaagctgtacgaggaggcgcagatgggccgcagggtgaagcagtacttg
gcgcaggtgaacagagacgtggacgaggacagcctcatgacgcgctccgtggcgctggag
ccggccagcgcgcccccagcggcgccgcgcatccccggcgagcgcaagacggccaagtcg
gctgagagctcccccgtggtgacgcgggcccccatcctcaggcagggggcctccagatgg
cctcatgggacaccgggctccacagcggtgggggctgccacccaggccgcccccatgtcc
ctgcagccgccccgtaagcgcttccccgctaacgctttgcttcctcttggagccacttca
ccgaactcgtaccgcaagcttcttgccctctcggagagccacgcggacaagaagagcaga
tcaggtgacgagtcggtcccgacaccccccgcgtctcctaggacttctccacgacgaggc
tctcagatgaagcgcaaaaactctcagcgatctaattcgggagggtcaactgcgtcctcg
gccgtggaaaacgccaacaagaacaacaacactcccaggacatacggcattgggttcacg
ctggcgtctctcacggacgtgcgcgccacgtgcgagtctgggtcggatgagcgggaggca
gtggaaggcccagcgagcggagggcagcacgagacctccccccacggccctggggatgag
gtcggcaccgaacgacccccccctggcctcccccccacaagcgacgaccccggagctcag
gactccgacccgggctccaaagcggacgcagccgccgccgccgtggacgacgacgccgag
gggggcgggcggtccctgctgctgcccccgtacagccgcaactcgctcgagacgtcggac
agcggacgggacagctggacgtcgtgctccagcggctcgcatgacaacttccaggcgctg
acgagcagccgctcttactggagcggctcgggcgggctgagcacgggcgacctggccgcc
gagctggagcagtgctgggtcctgctgggcgccggccgcctggcgacgaacgcgagcaag
cgcgccgccgccgtcggagacggccccgtcgtcgtcgacgacgacggcggcgtcgtcgtc
cgtggcgcggtccgcagctccccgtcggtcctttcgtcgctgtcgccgtcccgcgagagc
tgggcgtcgtcgacgggctcgctgtctccggaggagaacgagggcgacacgggcacgata
aagcggcgcaacggcaaggactgcctccccgacgcggcggggcggcgggacgagaagccg
gcgccgccagtgggcggcgccgcgcttgttgcagacgcggctcgcgccggaggagacggg
agggaggattcggcggagaagacgcgggatgccgaggtggtggtggccgctgcggagccg
gccggagaaggaggtttagtagtgtactgcgtcacgcgaaaaaccgtgccctccagcgcg
gggagtggcgcaggagatcccctgcatgccctggcccccccggaagagagctccgctcat
tccggctcgtgccccgcgcacctccaccccccgctgcatgcgaccgcctgcgatagtggc
cccgaagtgcagcagcagcagcggccgtgttccgccacgccggcgatccgcccgacgtgg
aatgtgccccatgtgctcggcagtcaggcagtgcatggacagggcttgctcagttcaccg
gttaagcagcagcagcagcagtatgaggacgagaaagaccaagtatcgaccgtgtag
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