Lethenteron reissneri (Far Eastern brook lamprey): 133354555
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Entry
133354555 CDS
T09663
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04210
Apoptosis
lrj04218
Cellular senescence
lrj04620
Toll-like receptor signaling pathway
lrj04621
NOD-like receptor signaling pathway
lrj04622
RIG-I-like receptor signaling pathway
lrj04623
Cytosolic DNA-sensing pathway
lrj04625
C-type lectin receptor signaling pathway
lrj04920
Adipocytokine signaling pathway
lrj05132
Salmonella infection
lrj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133354555
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133354555
04218 Cellular senescence
133354555
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133354555
04621 NOD-like receptor signaling pathway
133354555
04622 RIG-I-like receptor signaling pathway
133354555
04623 Cytosolic DNA-sensing pathway
133354555
04625 C-type lectin receptor signaling pathway
133354555
09152 Endocrine system
04920 Adipocytokine signaling pathway
133354555
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133354555
09171 Infectious disease: bacterial
05132 Salmonella infection
133354555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133354555
Transcription factors [BR:
lrj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
133354555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
133354555
NCBI-ProteinID:
XP_061427462
LinkDB
All DBs
Position
47:complement(7670828..7725865)
Genome browser
AA seq
971 aa
AA seq
DB search
MGDDLYHLDSNLEMLEQYNTVDIRAFHEFEVPQPVVIGPYLQITEEPKQRGFRFRYPCEG
PSHGGLPGCSSERNKKTFPTVRICKYLGLAKVVVQLVTENEPYRLHPHSLVGKNAENGAV
SCTVGPHDMTAMFPSLGVLHVTKKSVASVLEKLWSDAQISGLANIGNIVLESGFHNVHAR
DLTDTEARQIKNDAQQGAKTIDLSVARLMFTAYLPDSNGVFTHRLAPVFSNPIYDSKAPN
ANNLKIVRMDKTSGCVTGGDEVYLLCDKVQKEDIQVRFFHDDWEAWGNFGPTDVHKQYAI
VFKTPRYCNVDISKSVTVFVQLRRKSDSETSEAKPFIYYPQKQDKEEVARKRQKTLPHFS
DHLGGGGMGGGMGGGMGGGMGGGMGSTSMAPGTSGGATEFFGGPSMEGPTGGSYSTLGGG
GGGSMWSHGSHSDFSGGFNFQTNAMNMNFSELTLPGLAPPHQQDIAGINYAYQGLEFDGS
GGVQGSDGMEAFEIIKRPDEEDSDSDSDDDHLETDAAMEEMRPTVHAFPVASPLIKGRER
PGFVPLKPAHVGGQSPKKVPFVRESPQPTRKPAEAQTPKVTVGKLVKDSAVQTPGRHLEA
SLLLLAERTAKAQKDFAITADVRMLLAPQRHLTGVQDDNGDAPLHLAVIHQRQLVVQQLL
QVIVTIPHQNIVNLPNDLKQTPLHLSVITRQSEVTQILLRSGADPMVPDRHGNLVVHTAV
ANNDENTLRILIEWSGEAADRLVDSVNYEGYYPVHVAVMANSLACLKMLVNAGADVNRPE
QTYGRTALHIAVEADNLSLAAYLADQHQTEVDTVTYDGNTPLHLATGRRLTAMVALLVQA
GADVHAENFEAPTDANGFDYDSDDEEEGDSECAESDSGIARGTTPLHLAAGNKEVYDILC
GKRYESRKPPIVPAADLRAVQSTDSICDSGLTASIMHLSLQGSELDSASLRSAATNLAAT
HVRPADRKSLQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgatctgtatcatttagactcgaacttggaaatgctggagcagtataacacc
gtggacattcgtgcgttccacgaattcgaggttccgcaacccgtcgtaattggaccttac
ctgcaaataacagaggagcctaaacagagaggtttccgctttcgctacccctgtgaaggc
ccgtcgcacggagggctgcccggttgctcgagcgagcgcaacaagaagaccttccccacc
gtcaggatctgcaaataccttggcctagcgaaggtggtggtgcagctggtcaccgagaat
gaaccataccgcctgcacccccacagcctggtgggcaagaatgctgagaacggtgccgtc
agctgcaccgtgggcccgcacgacatgacggcgatgttccccagcctcggtgtgctgcac
gtcaccaagaagagcgtggcatctgtactggagaagttgtggtcggatgcgcagatctcc
gggctggccaacattggcaacatcgttcttgagagcggcttccacaacgtccacgcgcgg
gacctgacggacacggaggcgcggcagatcaagaacgacgcgcagcagggtgccaagacc
atcgacttgagcgtggcgcgcctcatgttcaccgcctacctgcccgacagcaacggcgtc
ttcacccaccgccttgcccccgtcttctccaaccccatctacgacagcaaggctcccaat
gccaacaacctgaagatcgtgcgcatggacaaaacgtcgggctgcgtgacgggaggcgac
gaggtgtacctgctctgtgacaaggtgcaaaaagaggacatccaggtgcgattttttcac
gacgattgggaagcttggggaaatttcggaccgacggatgttcacaaacagtacgccatc
gtgttcaagacgccgcgttactgcaacgtggacatcagcaagtcggtcaccgtgttcgtg
cagctgaggaggaagtcggacagtgagacgagcgaggcgaagccgttcatctactacccg
cagaaacaagacaaggaggaggtggcccgcaagcggcagaagacgctgccgcacttctcg
gaccacttgggcggcggcggcatgggtggcggcatgggtggtggcatgggcggtggcatg
ggcggtggcatgggctccacctccatggctcctggcactagcgggggcgccaccgagttt
ttcggtggcccgagcatggagggcccgacgggaggctcctacagcacgttgggcggcggc
ggtggcggcagtatgtggagccacggcagccactccgactttagcggtggattcaacttt
caaacaaacgccatgaacatgaacttctctgagctcactctgccaggtctggcacctcct
catcagcaagatattgctggtatcaactacgcttaccagggtcttgaatttgacggctcc
ggtggcgttcaaggttcagacgggatggaagctttcgagattatcaagcgcccggacgag
gaggacagcgacagtgacagcgacgacgaccacctggaaacggacgcggcgatggaggag
atgcggccgaccgtgcacgccttcccggtggcgtcgccgttgatcaagggacgcgagcgg
cccgggttcgttccgctcaagccggctcacgtgggcggccagagtcccaagaaggtcccc
ttcgtccgcgagtccccgcagcccacgaggaagcctgcagaagctcagacaccgaaggtc
accgtggggaagctggtcaaggactcagccgtgcagacccctggcaggcatctcgaagcg
tccctgctgcttctagccgagcgcacggcgaaggcgcagaaggactttgcgataacggcc
gacgtgcgcatgctgctcgccccgcagcgccacctcacgggtgtgcaggacgacaacggg
gatgcacctctacacctggctgtgatccaccagagacaactcgtggtgcaacagctcctg
caggtcattgtgaccatccctcaccagaatatcgtcaacctgcccaatgacctcaagcag
actccgctgcacctctccgtgatcacgcggcagtccgaggtgacccaaatactgctgcgc
tcgggcgccgaccccatggtgcccgaccgccacgggaatctcgtggtgcacacggccgtg
gccaataacgacgagaacacgctccgcatcctcatcgagtggagtggcgaagcggccgac
aggctggtggacagcgtcaactacgaaggctactaccccgtgcacgtggctgtgatggcc
aacagtttggcgtgcctcaagatgctggtgaacgctggagcggatgtcaaccggccggag
cagacgtatggacgcacggcgcttcacattgccgtggaagcagataacctgagtcttgcc
gcttacctcgctgaccagcaccagacggaggtggatacggtgacgtacgacggcaacacg
ccgctgcacttggcgacggggcgcagattgacggccatggtggcgctgctggtgcaagcg
ggtgccgacgtgcacgccgagaacttcgaggcgcccacggacgctaacgggttcgactac
gactctgatgacgaggaggagggcgacagcgagtgcgcggagagcgactcgggcatcgca
cgcggcaccaccccgctccatcttgccgccggcaacaaggaggtgtacgatatcttgtgt
ggaaaacggtacgagtcgagaaaaccgcccatcgtcccggctgcagatctgcgggcagtg
cagagcaccgacagcatatgtgacagtggattgacggcctccatcatgcacctcagccta
caaggctccgagctggactctgcgtctctgcgctccgctgccaccaatctcgccgccacc
cacgtccgccccgctgacaggaaaagcctgcagtga
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