Lethenteron reissneri (Far Eastern brook lamprey): 133354631
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Entry
133354631 CDS
T09663
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133354631
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133354631
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_4
zf-met
zf-C2H2_6
zf-C2HE
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
zf-C2H2_jaz
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
133354631
NCBI-ProteinID:
XP_061427636
LinkDB
All DBs
Position
6:8453074..8574402
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AA seq
1010 aa
AA seq
DB search
MVMGEREPPRLAAPDEPLEGEEEEEDGVAAGRSERELQDTCTYIVQDQPWPGPLPGAAPR
AEATLPRNLCFHLSHTRQIIGVLSSEYIPEGTRFGPLVGDIYTEDAVPKEANRQYFWRIY
RHGELQHFVDGWDVSRSNWMRFVNPARSRREQNLVACQHGDDVFFYTLRGVSPGRELLVW
YSPEYTRRMGQAHHRLQDSRDQPHPTTDMEPLRPSSSRGDTRSSPGAQKDGGRAVGFGKR
PGGDVVCPHPRYPTGSSYNGGGAGTQSHVPFSVDDLMRPDQAKLSGKFTARLPSPQYPSA
AHHHHHHRHTPHAVSSTSAPAKATGYLPHVARAYPGQEGLCGILAQPRMPFMPQPFLRHP
VEPFPLPPSYPPGVGAPHDFGGKFFLLQGGIGALNGMHMPVPDVYHRAYGQPLKSGAPHH
LVLPQSMFPHPRPADKGPGREPAPAPSHKPGRLVPAPTSAFSQPVHAHKENAAAGFSHAS
SAARPPPGAYAPAGYAIPYRGSPARTPAIYSPSAPFQLTSAAAAAGGGGGVHRLQSRSPY
GGNPAGARRRSPGGVVRAASSASPDSSSSSASSSSSLLPLSSSSSSVAGDALDGASRSFG
GSRATHHHLGYRSLPYPLRKHNGKIIYECNVCRKTFGQLSNLKVHLRVHSGERPFKCQTC
GKGFTQLAHLQKHHLVHTGEKPYQCQVCHKRFSSTSNLKTHLRLHSGEKPFQCKLCPAKF
TQFIHLKQHRHLHARERPHRCPGCQQSYIHQISLTMHLRGFCPSQHKRATSAEARGGPLP
ADRSTAAAEFATLAPSQDVLASFRPSTAAAHPPSGAAGPGQLAGPGGGDPRPGFPKDPRP
DVSPEYLALVNQKIEAFDLSEEAARAGEDSKVEAQVEARILSRFCKALSLEGRAFSSADG
QPARKLTQRNGAAAAAQWTLAAGRQRRTPCNVGHVPVAAAGRRQQRRHRHHRGPNSTLAD
RQQRGGGLSLRRERNGRCDGIGTSVSHGAFRLETEAAAGFAVFSQDQGGA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgggtgagcgggagccgccccgtctggcagcgccggacgagcccctggaggga
gaggaggaggaggaggacggcgtcgccgccgggcgctccgagcgggagctgcaggatacg
tgcacgtacatcgtgcaggaccagccctggccggggcctctccccggagcggcgccgcgc
gccgaggccacgctgccacgcaacctctgtttccacctctcgcacacgagacagatcatc
ggcgtgctgagcagtgaatacatccctgagggaacgcgcttcggtcctctcgtgggggac
atctacaccgaggatgcagtcccgaaggaggcaaaccggcagtatttctggaggatctac
cggcacggggagctgcagcactttgtggacggctgggacgtgagccgcagcaactggatg
cgcttcgtgaacccggcgcggtcgcggcgcgagcagaacctggtggcgtgccagcacggc
gacgacgtcttcttttacacgctgcgcggggtctcccccgggcgcgagctgctcgtgtgg
tactcgcccgagtacacgcggcgcatgggccaggcacaccaccggctgcaagactcgcgc
gaccagccccaccccaccacggacatggagccgctgcggccgagctcgagccgcggtgac
acgcgcagcagccccggcgcgcagaaggacggcggcagggccgtcggcttcggcaagcgg
ccgggcggcgacgtcgtgtgccctcacccgcgctacccaacgggatcgtcctataatggc
ggcggcgcgggaacccagagccacgtgccgttcagcgtcgacgacctcatgaggcccgac
caggcgaagctgtccggaaaattcacggcgaggctcccgtctcctcagtacccctccgcc
gctcaccaccaccaccaccaccgccacacgccacacgccgtctcctccacctcggctccg
gccaaagcgacggggtacctgccgcacgtcgcccgagcgtacccgggccaggagggcctc
tgcggcatcttggctcagccccgcatgccgttcatgccccagccgtttctgcggcacccc
gtcgagccgttccccctcccgccgtcgtacccgccgggggtcggcgccccccacgacttc
ggcggcaagttcttcctgctgcagggcggcatcggcgccctcaacggcatgcacatgccc
gtgccggacgtgtaccaccgcgcgtacggccagccgctcaagagcggagcgccgcaccac
ctggtcctgccgcagtcgatgttcccccaccccaggccggcggacaagggccccggccgc
gaaccggcgcccgcgccgtcccacaagccgggccggctcgtccccgcgcccaccagcgcc
ttctcgcagccggtgcacgcccacaaggagaacgcggccgcgggcttctcccacgcctcg
tcggccgctcgcccgccgccgggcgcgtacgcccccgccggctacgcgatcccctaccgt
gggtcgccggcccgcaccccggccatctactcgccctccgcgcccttccagctgacgtcc
gcggcggcggcggcggggggcggcggcggcgtccaccgcctgcagtcgcgctcgccctac
ggcggcaacccggcgggcgcgcgccgccgctcgcccggcggcgtcgtccgcgccgcgtca
tccgcgtcgcccgactcgtcgtcgtcgtccgcgtcgtcgtcgtcgtcgctgttgccgctg
tcgtcctcgtcgtcgtcggtcgcgggcgacgccctcgacggcgcctcgcgatcgttcggc
ggttcgcgagcgacgcaccaccacctgggctaccgctcgctgccgtacccgctccgcaag
cacaacggcaagatcatctacgagtgtaacgtctgccgcaagaccttcggccagctctcc
aacctcaaggtccacttgcgggtccacagcggcgaacggccgttcaagtgccagacgtgc
gggaagggcttcacgcagctggcgcacctgcagaaacaccacctggtgcacaccggagag
aagccctaccagtgtcaggtttgccacaagcgcttcagcagcacgagcaacctgaagacc
cacctgcggctgcactcgggcgagaagcccttccagtgcaagctgtgcccggccaagttc
acgcaattcatccacctgaagcaacaccgccacctgcacgctcgcgagcggccccaccgc
tgccccggctgtcagcagagctacatccaccagatcagcctgaccatgcacctcagaggc
ttctgcccgtcccagcacaagcgtgcgacgtcagccgaagcccgggggggccccctgccc
gccgaccgttccaccgcggcggccgaattcgcgacgctcgctccctctcaagacgtcctc
gcgagcttccggcccagcactgccgccgcgcatccgccgtccggggcggcgggtcccggc
cagctagctggtcccggcggcggcgacccccggccgggcttcccgaaggacccgcgccct
gacgtgtcgccggagtacttggcgttggtgaaccagaagatcgaagcgttcgacctcagc
gaggaggccgcgagagccggggaagactccaaggtcgaagcccaagtggaggcgaggatc
ctgagcaggttctgcaaggcgctgtcgttggagggccgagccttctcaagcgccgacggg
cagccagcgaggaaattgacccagcggaacggagcagcagcagcagcgcaatggacactc
gccgccggacgtcaaagacgaacgccgtgcaatgtcggtcacgtccccgtcgccgccgcc
ggtcgccggcaacaacggcgccatcggcaccaccgcggaccaaactcgacgctcgccgat
cgtcagcagcgcggcggcggattgtcactccgccgcgagaggaacggacgatgcgacggt
attggcacgtcggtctcccatggtgcattccggctggagactgaagctgctgccggattc
gccgtcttctctcaagatcaaggaggagcataa
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