Lethenteron reissneri (Far Eastern brook lamprey): 133354745
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Entry
133354745 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133354745
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133354745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
TPR_2
TPR_19
TPR_17
Beta-prop_WDR35_TULP_N
TPR_14
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
TPR_11
ANAPC3
TPR_16
TPR_6
TPR_9
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
133354745
NCBI-ProteinID:
XP_061427812
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Position
6:complement(9435929..9455931)
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AA seq
681 aa
AA seq
DB search
MDPYNVTMDILNRQIKERGVLSFQRRQHVTDAMVRRLGLEAELQGHTGCVNCLEWNEKGE
MLASGSDDQHIILWDPLRHRKLLQMHTGHTANIFSVKFLPHSGDRLVVTGAADFKVHVHD
VVSKETLHIFDKHTNRVKRIATAASTPHMFWSAGEDGTIRQFDLRESSNRSQVLVDLTWY
CSSQVEAKCLAINPSDNTSLAVGANDPYVRLYDMRMITQHRKSCRLNAPSGTGVELDSQY
SKLPDGAVQYYVAGHLPSKQTDYQRRFRTLAVTYLTFSPDGNELLVNMGGEQVYMFDLHS
RQRPYCFSAASRRRATPGADVQNGKQANGVSNGLHLHSNGLRLSDEPQQPPPSPELPPAV
EKLKQLANAAFGRQQWPVAVSLYNRAVALCPTNSVLYGNRAAAYMKRKWDGDQYAALRDC
RAAVALNPWHLKAHFRLARCLYELRHVGEALACLDDFRGRFPEQARSSACDALDRDIKAA
LFSRTDSDDERKATDPAGGGGGGGGGAGSGGGRVRGFSEEELRLREHSYDYKLRYCGHCN
TTTDIKEANYFGSAGQYVVAGSDDGSFFLWDKATCNLLRVLRGDESIVNCLQPHPSACLL
ASSGIDPVVRLWAPRPQNGFENERVVDDTDAVCLANQRRMNADPLEVMLLNMGYRITGLT
GSELGSDDDSGSESQVQCRTT
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggatccctacaacgtcaccatggacatcctcaaccggcagatcaaggagcgtggggtc
ctctccttccagcggaggcagcacgtgacggacgcgatggtgcgccgcctcgggctggag
gccgagctgcagggtcacacgggctgcgtcaactgcctcgagtggaatgagaagggagag
atgctcgcgtcgggctcggacgaccagcacatcatcctgtgggacccgctgaggcaccgc
aagctgctgcagatgcacacgggacacacagccaacatcttctctgtcaagttcttgccg
cactcgggcgaccgcctcgtggtgacaggcgccgctgacttcaaagtgcacgtgcacgac
gtcgtgagcaaggagacgctgcatatcttcgacaagcacactaaccgcgtcaagcgcatc
gccacggccgcctccacgccgcacatgttctggagcgccggcgaggatggcaccatccgg
cagtttgacctccgcgagagcagcaaccgctcgcaggtgctggtggacttgacatggtac
tgcagctcgcaggtggaggccaaatgcctcgccatcaacccaagcgacaacacgagcctc
gccgtgggcgccaacgacccctacgtgcgcctctacgacatgcgaatgatcacgcagcac
aggaagtcgtgccgtctgaacgcccctagcggcacgggggtggagctggactcgcagtac
agcaagcttcccgacggtgccgtgcagtactacgtggcgggtcacctcccgtcaaagcag
acggactaccagcgcaggttccgcacgctcgccgtcacgtacctcactttcagtcccgac
gggaacgagctgctcgtcaacatgggcggagagcaggtctacatgttcgacctccacagc
cgccagcgcccgtactgcttctctgctgcctcgcgacgccgggcaacgccgggcgccgac
gtgcagaacgggaagcaggcaaacggcgtctccaacgggctgcacctgcacagcaacggc
ctgcgcctgtccgacgagccccagcagccgccgccgagccccgagctgccgccggccgtg
gagaagctcaagcagctggcgaacgcggcgtttgggcgccagcagtggcccgtggccgtg
agcctctacaaccgcgccgtcgcgctttgccccaccaactccgtgctctacggcaaccgc
gccgccgcctacatgaagcgcaagtgggatggcgaccagtacgcggcgctgcgcgactgc
cgtgcggccgtggcgctcaacccttggcacctgaaggcgcacttccggctggcgcgctgc
ctgtacgagctgcggcacgtgggcgaggcgctcgcctgcctcgacgacttccgcggacgc
ttccccgagcaggcgcgcagtagcgcgtgcgacgcgctcgaccgagacatcaaggcggcg
ctcttctcccgcacggatagtgacgacgagaggaaggcaactgacccggcgggtggtggc
ggcgggggcggcggcggagcagggagtggcggcgggcgcgtgcgagggttttccgaggag
gagcttcgtctgcgtgagcacagctacgactacaagctgcgctactgcggccactgcaac
accaccaccgacatcaaggaggccaactactttggcagcgcgggccagtacgtggtggcc
ggctcggacgacggctccttcttcctgtgggacaaggcgacgtgcaacctgctgcgcgtg
ctgcgcggagacgagtccatcgtcaactgcctgcagccgcacccctcggcctgcctgctg
gcctcgagcggcatcgaccccgtcgtcagactctgggccccgaggccgcagaacggcttt
gagaatgagcgcgtggtggacgacacggatgccgtgtgcctggcgaaccagcggcgcatg
aacgccgaccccctggaggtgatgctgctcaacatgggctaccgcatcacgggcctcacg
ggctccgagctcggctcggacgacgactcgggctccgagagccaggtgcagtgccgcact
acctga
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