Lethenteron reissneri (Far Eastern brook lamprey): 133354789
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Entry
133354789 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133354789
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133354789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
TFIIA
Motif
Other DBs
NCBI-GeneID:
133354789
NCBI-ProteinID:
XP_061427892
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Position
49:5324555..5350001
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AA seq
614 aa
AA seq
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MSFSQITCQYIPVGSSVSAQTGGSLFVDRLSSQNAASSISSSSAAAAAAAASAASSSSSS
AAAAAATSSSSSSSSAAAAAAAAAAAVSSSQQAGGSQCREFQMNSSAAAAAVLGLYGSPY
AAQAYGAFLPYTAAELSVFSQLGSHYEIKDSPGLQHSSFPYPTAAYYSPYGGFQYTDPSR
PKNATRESTATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWAPRSRSDEEGHSCGSDAEVDRKEDDEEEEDEEDEAVGEEEAEEDDDDDDEEIDLENI
DIEKCEEEEDSGDLSRDDRDGAMEAELKMREAVKGQTAPGMRTSPTSCLSSEAPTASKPG
SPTLVVMSQGAPQLLRHHHHHQQQQHHQQKNPNVQQQQQQQQGHRESQPDPVGPARPKIW
SLAETATSPDSPRRSPSSVTQHTCGQIGGPSAYLYSPAAAAAILCSKLHQQSPQHNHHQH
QQQNGLHHHHHHNNHNNHHHQTQHHHHHQGHQQQQHHQQQQSFLLRQAEFLGIASQRGGT
GVVAAAAAAAGFVGVGVNATSSVYQTPSNSLQLTRAAQESLTSPSTMKTAFQPVHRRTHT
ELDASVGLPALSSA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttctcaaataacgtgtcaatacatcccagtaggatcatcggtctcggcacaa
actggtggatctttgttcgttgatcgactgtcatcccaaaacgcggcatcatcaatctca
tcatcatcagcagcagcagcagcggcggcggcatcagcagcttcttcatcatcatcatca
gcagcagcagcagcggcgacgtcgtcgtcatcatcatcatcatccgcagcagcagcggca
gcagcagcggcggcagcggtgtcatcatcccagcaggcaggaggatcgcagtgccgggag
tttcaaatgaattcatcggcagctgccgcggctgtgctggggttgtacggctccccgtac
gcggcgcaggcgtacggggccttcctgccgtacacggcggccgaactcagcgtcttctcg
cagttgggctctcattacgagatcaaggacagcccaggattacagcactcctccttccca
tacccaacagccgcctactacagtccctacggcggcttccagtacacggacccatcccgt
cccaagaacgcgacccgcgagagcacggcaacgctcaaggcgtggctcaacgagcatcgc
aagaacccgtaccccaccaagggcgagaagatcatgctggccatcatcaccaagatgacg
ctgacgcaggtctccacgtggttcgccaacgctcgccggcgtctcaagaaggagaacaag
gtgacgtgggcgccgcggagccgtagcgacgaagaggggcactcgtgcggcagcgacgcc
gaggtggacaggaaggaggacgacgaggaggaagaggacgaggaggacgaggcggtgggc
gaggaggaggcggaagaggacgatgacgacgacgacgaagagatcgacttggagaacatc
gacattgagaagtgcgaggaggaggaggacagtggagacttgagcagagatgatcgcgac
ggagcgatggaggccgaactgaagatgcgggaggcggtcaagggacagactgcgcccggc
atgagaacgtccccaacgagctgtctctcctctgaggctccgaccgcgtccaagcccggc
tctcctaccctggtggtcatgagtcaaggggcacctcaactgcttcgacaccaccaccat
caccagcagcagcagcatcatcagcaaaagaatcccaacgttcagcagcagcagcagcag
cagcaaggtcatcgtgagagccagcctgacccggtgggtcccgctcggccaaaaatctgg
tcgcttgccgaaactgccacctccccggatagcccgcgacggtctcccagcagcgtcacg
cagcacacgtgcggccagatcggcggcccctcggcctatctctacagtccagcggcggca
gcagccatcctttgtagcaaacttcaccagcaaagtcctcagcacaaccaccaccagcac
cagcagcagaatgggcttcaccaccaccaccaccacaacaaccacaacaaccaccaccat
caaactcaacaccaccaccaccaccaaggccatcagcagcagcagcaccatcagcagcag
cagagtttcctgttgaggcaagctgaatttttgggcattgcgagtcagcgaggtggcacg
ggagtggtcgcagcggcggcagcggcggcggggtttgtcggcgtgggtgtcaacgcgacg
agcagcgtctaccagacgcccagcaacagcctccagttgaccagggctgcccaagaatcg
ctgaccagcccttcaacgatgaaaaccgcgttccagccggtgcacagacgaactcacact
gagttggatgcgtccgtaggactgccagcgttgtcgtcagcctga
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