Lethenteron reissneri (Far Eastern brook lamprey): 133354815
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Entry
133354815 CDS
T09663
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133354815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133354815
03036 Chromosome and associated proteins [BR:
lrj03036
]
133354815
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133354815
Coactivators
SAGA/TFTC/STAGA complex
133354815
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133354815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
133354815
NCBI-ProteinID:
XP_061427940
LinkDB
All DBs
Position
49:6224069..6251855
Genome browser
AA seq
1148 aa
AA seq
DB search
MANASDPLLEMFTTDVDEKAVSELVGSLESRLSRQRPTVLNSHAQQQQQQQPQQQQQQQL
PDRGGGRLGAAAAAGGGASKTAASDLGEAEARSGTLGPPMKRTAAAGILLLQQQQQQPQQ
YQQLQQLQQQQQQLGGTNCQRHGGVVASGVSVGTSSASLSSASVAAALPSSLSGSSASSL
SSSTSSLSSSSAAVAASSSSSSSSAGAAALLSSPSTSLAQASSLTQSSLSAAASTCSSSS
LSSQSSSVSAPASPSPSSSTTSISSLSNHADVPVLPLGRTPVNGGSVYGTPTGAGGAGGG
VVVGGGVCGGVGVVSPARTSSINSGGNSNNGVAMSVVALDSGRMNFNVTTNLNPNVTPNL
IAPNPIITATTTIITTSTNPSVTFTNPNTTTSTSNPPGLATITLQRPPASHNGAPISIVS
TSSIISSSSSNIISSSSNSIGHPPLMCTTPGGVVSGQPSVISAVTSRPAITLISSPQQQQ
QQQQQTATVSTLAPSGAGMVPMAGGHSGVVRVSVPPPPSPGPALSPARPGLALQQRLLPP
QIIAPRPQTIQLPPGFTLPPGTVMVRAGEQGQLFLIQQSVLAQAGGAAPHAAPVPPSPTV
ATVAHAPSPPAASPATQPQQGVRLAALQIASVTPPVGGAPTLAAATPAPPAGPALPASQP
PLVFTPEVMENVKKCKNFLSTLIKLASSGQQSPETTRNVKELVQNLLDAKMEPEEFTSRL
QKELKSSPQPYLVPFLKKSLPAVRYLAQNPQAPTQSAPQLNAIGPPATSTGAARPLGAQT
HAAQAPLHTVLTTQHGGGVKQIVLQSQARGSTHIKPGTVVKTQGPALIRPPPTGVPGATG
LQASASQKGKMKDPGGGTFKDDDDINDVASMAGVNINEESARIAATGSDTVGTQIRSCRD
EAFLSAGPLQRRLLDIGRRYGVTEVPADVVGLVSHAAQERLKNLVERLSVIAQHRTETYR
DSDDSEQMSDVRSQLRFFEQLDRLEKQRKDEQEREILLRAAKSRSRQEDPEQARLKQKAK
EMQQAELAQMRQREANLTALAAIGPRKKRKLDSPGPGTPGEAGGGGPGASSSGGTGAAGG
SGGGAAEAVAGPGGGGGGGGGGGGVPGTPTRPSQRARFTRVNLRDLVFLLEQDRETAHSR
VLYRAQLK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcgagcgaccctctgctggagatgttcacgacggacgtggacgagaaggcg
gtgagcgagctggtgggctcgctcgagtcgcgcctctcgcgacagcggcccactgtgctc
aacagccacgcacagcagcaacaacagcagcagccacagcagcagcagcaacaacagctg
ccggaccgaggagggggccggctcggagccgcggctgccgcgggcggaggcgcctcaaaa
acggcggcgtcggatttaggcgaggccgaggctcggtccgggacgctaggcccacccatg
aagcgaacggctgcggcgggaattttactcttgcaacaacaacagcaacaaccgcagcag
tatcagcagctgcagcagctgcaacagcagcagcagcagctcggcgggacgaattgccag
agacacggcggagtggtggcttcgggtgtgagtgtcggtacatcatcagcatcgttatca
tcagcatcggtggcggcagctttaccgtcttcgttatcgggatcgtcggcatcatcatta
tcatcatcaacgtcttcactgtcatcatcatcagcagcagtagcagcatcgtcgtcgtcg
tcatcatcatcagcaggagcagcggcattactttcatcaccgtcaacatcattagcgcaa
gcatcatcattgacacagtcatcgttatcggcagctgcatccacctgttcctcttcctcg
ttatcatcgcagtcatcgtccgtttcggcccctgcatcaccatcaccatcatcatccacc
acctccatctcctcgctgtccaaccacgccgatgttcccgtgctacctttgggtcgaaca
ccggtgaacgggggctccgtgtacgggacacccactggggcaggaggagcaggaggaggc
gtcgttgtcggtggtggagtctgtggtggagtcggtgtagtttcacctgcaaggacctcg
agcattaacagcggtggcaacagcaacaatggtgtggctatgtcggtggttgcgttggac
tcagggcggatgaacttcaatgtcaccaccaacctcaaccctaacgtcacccccaacctc
atcgcacccaaccccatcatcaccgccaccaccaccatcatcaccacctccaccaacccc
agtgttactttcaccaaccccaacaccaccacctccacttccaacccccccggtctcgcc
acgatcactctgcagcggccacctgcgagccacaacggagcaccaatcagcatcgtcagc
accagcagtattataagcagcagcagcagcaacatcatcagcagcagcagcaactccatc
ggacacccaccgctcatgtgcaccacgccggggggtgttgtgagcgggcagccgtcagtc
ataagtgccgtgacctctcgccccgcgattaccctcatcagcagtccacagcaacaacag
cagcaacaacagcagactgccactgtgtccaccttggcacccagtggtgcggggatggtg
cctatggctggtgggcacagtggcgtggtgagggtgagtgtaccgcctccaccgtcgccc
ggaccggcgctgagtccagcgcgaccgggtctcgcactccagcagaggctgctaccgccg
cagattattgcaccacgaccgcaaacaatccagcttcctcctgggttcaccttgccacca
ggtacggtgatggtgcgcgccggcgagcagggccagctcttcctcatccagcagtcggtg
ctggcgcaggccggtggcgccgccccccacgccgcccccgtgcccccctcccccaccgtg
gccacggtggcgcacgcccccagcccaccggccgccagccccgccactcaaccgcagcag
ggagtgcggctggccgcgctgcagattgcatcggtgacgccgccggtggggggggcaccc
acgctcgccgctgccacgccggcccctcccgcagggcccgctcttcccgccagccagcct
ccgctcgtcttcacgccggaggtgatggagaacgtcaagaagtgcaagaacttcctctcg
acgctcatcaagctggcgtcgtccggccagcagtcgcccgagacgacgcgcaacgtcaag
gagctggtgcaaaacctcctggatgccaagatggaaccggaggagttcacatcgcggctg
cagaaggagctcaagtcgtcgccacagccctacctcgtgcccttcctcaagaaaagcctg
ccggccgtgcgctacctggcgcagaacccgcaagcgccgacccagtcggccccgcagctc
aacgcgatcggacccccggcgacctcgaccggcgccgcgcgacccctgggagcgcagacg
cacgcggcgcaggcaccgctacacacggttctgacgacgcagcatgggggtggagtgaag
cagattgtgctgcagtcgcaggctcgcggcagtacacacatcaagcccggcacggtggtc
aagactcagggccctgctctcatcaggccaccccccacaggcgtgccgggagccaccggg
ctgcaggcatcggcgagccagaaggggaagatgaaggatcctgggggcggcactttcaag
gacgatgacgacatcaacgacgtcgcctccatggcgggcgtgaacatcaacgaggagagc
gcacgcatcgcggccacgggctccgacacggtggggacgcagatccgctcgtgccgtgac
gaggccttcctgtcggcagggcccctccagcgccgcctgctcgacattggccggcggtac
ggcgtgacggaggtgcctgcggacgtggtggggttggtgtcgcacgcggcgcaggagagg
ctcaagaacctggtggagaggctgagcgtcatcgcacagcaccgcacggagacgtacagg
gactcggacgactcggagcagatgagcgacgtgaggtctcagctgaggttcttcgagcag
ctcgaccgcctggagaagcagcgcaaggatgagcaggagcgcgagattctactcagggcg
gccaagagtcggtctcgacaagaagacccagaacaagcccggctcaagcagaaagcaaaa
gagatgcagcaagcggagctggctcagatgcgccagcgagaagcgaacctgacggcgctc
gcggcaatcgggccacgcaagaagcggaaactcgattcgccagggccgggcacgccgggg
gaggccgggggtggggggcccggcgcttcgtcttccggcggcaccggcgcggcgggaggc
agcggcgggggggcggcggaggccgtcgcggggcccggcggcggcggtggcggcggcggc
ggcggcggcggggtgccgggcacgccgacgagaccgtcgcagcgagcgcgcttcaccagg
gtcaacctgcgcgacctcgtcttcttgctggaacaagatcgcgagacggcgcactcgcgc
gtgctgtaccgcgcgcagctcaagtga
DBGET
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