Lethenteron reissneri (Far Eastern brook lamprey): 133354860
Help
Entry
133354860 CDS
T09663
Name
(RefSeq) iroquois-class homeodomain protein irx-4-A-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133354860
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133354860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
133354860
NCBI-ProteinID:
XP_061427996
LinkDB
All DBs
Position
49:complement(4342549..4389640)
Genome browser
AA seq
617 aa
AA seq
DB search
MSYTQFGYPYTTTTQLLVSSPPSSSSVIPGIISGISNNNSSILSSSNNSNNNSNNNSSSN
SSSSGGGGIISPPCYDSNNSSNINNRGSNSAPADGTTGSTPGSRVATGPATPPPLHPSAV
AAPTVCCSPYNSRLLASAAARGDLTALGVYGGSYAAAAAAQGYGNYVPYGAEPSAFYSPL
TSPYEIKDSNGSLHTGLPQATSYYHYDGALNQYQYSRYGGVDLSAGTRRKNATRETTATL
KAWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPRSRPGDE
SGGKDECRRDVDREQQQQEEEEDEEQEAAAAAAAVVVDKRGVVKCFVSDHNGEKDHGKGH
VLSDLEDLDDVDSDHLGDDELEEGGHLQAKRFHKSQCKNYPPLAVVDASSINTSSIAASN
TSTTNNNNNIIISGSGGGGGSGVQQTSESIKSVFALSCGEPQDNLQLYDSTDQQQHQQQH
HHHHHQHHHQHHQAVSGGAKSLLPIASEKPRIWSLAHTVSSCDSKYPSCAALQQLQQQQQ
QQQQSPLSGSQATAGTLLQRHQKFHATLSQLSPPCSEPVGSWRQVAAAASPEQLLLKAAE
QNGLGSYLLAIGVMCVK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatacacagttcggatacccctacaccactactacacagctcctcgtttcctcg
cctccctcctcctcctccgtcatcccgggcatcatcagcggcatcagcaacaacaacagc
agcattctcagcagcagcaacaacagcaacaacaacagcaacaacaacagcagcagcaac
agcagcagcagcggcggcggtggcatcattagccctccctgctacgacagcaacaacagc
agcaacatcaacaacagaggttcaaattccgccccggcggacggcaccacaggttcgact
ccgggttcgcgagtggccacgggaccggccacccctcctccgcttcacccgtcggccgtg
gctgcccccacggtctgctgctccccgtacaacagccgactgttggcctcggcggctgcc
cgaggggacctcacggccctcggggtctatgggggttcgtacgcagcggcagccgcggca
cagggatacgggaattacgtcccctacggagcggagccgtctgccttctattcgccgctg
acctctccgtatgagatcaaagactcgaacggatctctgcacacaggacttccccaggcc
acgagctactatcactacgacggggcgctaaaccagtaccagtatagcaggtacggtggc
gtggatctgagcgcgggcacgcgtcgcaagaacgcgacgcgcgagacgacggcgacgctc
aaggcgtggctctacgaacatcgcaagaacccgtaccccaccaagggcgagaagatcatg
ctggccatcatcaccaagatgaccctgacgcaggtctccacgtggttcgccaacgctcgc
cggcgtctcaagaaggagaacaagatgacgtggtcgccgcggagccggcccggcgatgag
agtggagggaaagatgaatgccggagggatgtggaccgcgaacagcagcagcaggaggag
gaggaggatgaggaacaggaggctgctgctgctgctgcggcggtggtggtggacaagaga
ggagtcgtgaagtgttttgtgtcagaccacaacggtgagaaagaccacggcaaggggcac
gttctgagcgacctggaagacctcgacgacgtcgattcggaccacctgggtgacgacgag
ctggaggaaggtggacacctccaagcgaagcgcttccacaagtcccagtgcaagaactac
ccaccgctagcggtggtggacgcatcatccatcaacacctcctccatcgctgcctccaac
acatccaccacgaacaacaacaacaacatcatcatcagcggcagcggaggaggaggaggc
agcggcgttcaacagacttccgaaagcatcaaaagcgtgttcgctctgagttgtggcgag
ccacaagacaatctgcaactttacgactctaccgatcagcagcagcatcagcaacaacat
caccaccaccaccatcagcaccatcaccagcatcatcaggcggtcagcggtggtgccaag
tcgctgttgccgattgcgtcggagaagccacggatttggtctctggcccacacggtctcc
agctgcgactccaaatacccatcgtgtgcagcgcttcaacagttgcagcaacagcagcaa
cagcagcagcagtcgcctctgagcggctcgcaggcaacagcaggcacgctgctgcagaga
caccaaaagttccacgcaaccttgtcgcagttgtcaccgccgtgttccgagcccgtcggc
tcgtggcggcaagttgccgcggccgcgtcacccgagcaacttttgttgaaagcagccgaa
cagaacggactgggctcctaccttctcgcaattggtgtgatgtgtgtcaagtaa
DBGET
integrated database retrieval system
